RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 MS4A18H0YCH9 400 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 OR7A17O14581 309 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 ZNF208O43345 1280 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 TXNL1O43396 289 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 CIDEAO60543 219 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 CCDC22O60826 627 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 SCN2BO60939 215 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 CNIH1O95406 144 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 ACAA1P09110 424 aaPredicted RBP3.71□□□□□ -1.82
SDCBP-205ENST00000447267 FAM90A13PP0C7W8 464 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 FAM90A24PP0C7X0 464 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 PAICSP22234 425 aaKnown RBP3.71□□□□□ -1.82
SDCBP-205ENST00000447267 CD24P25063 80 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 FKBP2P26885 142 aaKnown RBP3.71□□□□□ -1.82
SDCBP-205ENST00000447267 TALDO1P37837 337 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 ARL1P40616 181 aaPredicted RBP3.71□□□□□ -1.82
SDCBP-205ENST00000447267 STX1BP61266 288 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 PPP1CBP62140 327 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 LIPEQ05469 1076 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 STX3Q13277 289 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 GTDC1Q4AE62 458 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 SGO1Q5FBB7 561 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 XKR7Q5GH72 579 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 C6orf10Q5SRN2 563 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 PDZK1Q5T2W1 519 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 C1orf134Q5TEV5 83 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 SLX4IPQ5VYV7 408 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 NET1Q7Z628 596 aaPredicted RBP3.71□□□□□ -1.82
SDCBP-205ENST00000447267 OR5AS1Q8N127 324 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 CLEC4FQ8N1N0 589 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 C10orf111Q8N326 155 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 DPP10Q8N608 796 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 C10orf53Q8N6V4 93 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 LRRC57Q8N9N7 239 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 OR6Q1Q8NGQ2 317 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 OR52N1Q8NH53 320 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 ZNF563Q8TA94 476 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 METTL6Q8TCB7 284 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 RPS4Y2Q8TD47 263 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 LRRC8CQ8TDW0 803 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 AENQ8WTP8 325 aaKnown RBP3.71□□□□□ -1.82
SDCBP-205ENST00000447267 C16orf78Q8WTQ4 265 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 CAPSLQ8WWF8 208 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 NABP1Q96AH0 204 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 CERS2Q96G23 380 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 ZNF486Q96H40 463 aaPredicted RBP3.71□□□□□ -1.82
SDCBP-205ENST00000447267 MAGEB18Q96M61 343 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 MS4A4EQ96PG1 132 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 GON7Q9BXV9 100 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 NUAK2Q9H093 628 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 RAB17Q9H0T7 212 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 NHEJ1Q9H9Q4 299 aaPredicted RBP3.71□□□□□ -1.82
SDCBP-205ENST00000447267 POPDC3Q9HBV1 291 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 TXNDC16Q9P2K2 825 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 FBXL17Q9UF56 701 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 CD300AQ9UGN4 299 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 OSGIN1Q9UJX0 560 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 PITPNC1Q9UKF7 332 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 PACSIN2Q9UNF0 486 aaPredicted RBP3.71□□□□□ -1.82
SDCBP-205ENST00000447267 MRPS7Q9Y2R9 242 aaKnown RBP3.71□□□□□ -1.82
SDCBP-205ENST00000447267 PPP2R2CQ9Y2T4 447 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 TMED7Q9Y3B3 224 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 KCNE3Q9Y6H6 103 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 TRBV5-3A0A0A0MS03 114 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 IGLV5-39A0A0G2JS06 123 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 HMX3A6NHT5 357 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 SMIM23A6NLE4 172 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 LRRC30A6NM36 301 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 SUPT3HB4E1H0 165 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 HSBP1L1C9JCN9 74 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 F5H5P2 479 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 IFNL4K9M1U5 179 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 PGRMC1O00264 195 aaKnown RBP3.7□□□□□ -1.82
SDCBP-205ENST00000447267 PRYO14603 147 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 OVOL1O14753 267 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 SURF4O15260 269 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 NUPL2O15504 423 aaKnown RBP3.7□□□□□ -1.82
SDCBP-205ENST00000447267 BANF1O75531 89 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 CRCPO75575 148 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 SERPINI2O75830 405 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 DCTN3O75935 186 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 SUPT7LO94864 414 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 VAMP5O95183 116 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 PDYNP01213 254 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 GPIP06744 558 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 TMEM225BP0DP42 221 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 COX5BP10606 129 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 CLUP10909 449 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 TCP1P17987 556 aaKnown RBP3.7□□□□□ -1.82
SDCBP-205ENST00000447267 PGAM1P18669 254 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 CBLP22681 906 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 PGM1P36871 562 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 SERPINB5P36952 375 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 HSD17B3P37058 310 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 SLC15A1P46059 708 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 GSTM5P46439 218 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 SLC7A2P52569 658 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 HAMPP81172 84 aa3.7□□□□□ -1.82
SDCBP-205ENST00000447267 TXNL4AP83876 142 aaKnown RBP3.7□□□□□ -1.82
SDCBP-205ENST00000447267 CD300CQ08708 224 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms