RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 MBD3L5A6NJ08 208 aaPredicted RBP18.26■□□□□ 0.51
PTPRF-207ENST00000436724 TMEM14DPA8MWL7 114 aa18.26■□□□□ 0.51
PTPRF-207ENST00000436724 ANXA3P12429 323 aa18.26■□□□□ 0.51
PTPRF-207ENST00000436724 RAB6AP20340 208 aa18.26■□□□□ 0.51
PTPRF-207ENST00000436724 MRPS10P82664 201 aaKnown RBP18.26■□□□□ 0.51
PTPRF-207ENST00000436724 TGFBR3Q03167 851 aa18.26■□□□□ 0.51
PTPRF-207ENST00000436724 THOC7Q6I9Y2 204 aaKnown RBP18.26■□□□□ 0.51
PTPRF-207ENST00000436724 RTN4RL2Q86UN3 420 aa18.26■□□□□ 0.51
PTPRF-207ENST00000436724 CDH26Q8IXH8 852 aa18.26■□□□□ 0.51
PTPRF-207ENST00000436724 MBD3L2Q8NHZ7 208 aaPredicted RBP18.26■□□□□ 0.51
PTPRF-207ENST00000436724 ZNF431Q8TF32 576 aaPredicted RBP18.26■□□□□ 0.51
PTPRF-207ENST00000436724 NANOS1Q8WY41 292 aaKnown RBP18.26■□□□□ 0.51
PTPRF-207ENST00000436724 ACTR6Q9GZN1 396 aa18.26■□□□□ 0.51
PTPRF-207ENST00000436724 OPN3Q9H1Y3 402 aaPredicted RBP18.26■□□□□ 0.51
PTPRF-207ENST00000436724 RANBP3Q9H6Z4 567 aaPredicted RBP18.26■□□□□ 0.51
PTPRF-207ENST00000436724 BEX1Q9HBH7 125 aa18.26■□□□□ 0.51
PTPRF-207ENST00000436724 PIEZO1Q92508 2521 aa18.26■□□□□ 0.51
PTPRF-207ENST00000436724 PRR14LQ5THK1 2151 aa18.26■□□□□ 0.51
PTPRF-207ENST00000436724 TLN1Q9Y490 2541 aaKnown RBP18.25■□□□□ 0.51
PTPRF-207ENST00000436724 RAB27BO00194 218 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 HPXP02790 462 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 SULT1A3P0DMM9 295 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 SULT1A4P0DMN0 295 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 WNT5AP41221 380 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 PTGFRP43088 359 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 GABRA6Q16445 453 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 SLC22A6Q4U2R8 563 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 FAAP20Q6NZ36 180 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 DNM1P46Q6ZS02 220 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 ZNF767PQ75MW2 155 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 ZNF610Q8N9Z0 462 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 C15orf40Q8WUR7 153 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 STARD4Q96DR4 205 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 POFUT1Q9H488 388 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 FLVCR2Q9UPI3 526 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 NCOR2Q9Y618 2525 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 FAM230AA0A1W2PPH8 454 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 MPIG6BO95866 241 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 APLNRP35414 380 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 VEGFCP49767 419 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 CAPZA1P52907 286 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 GNG2P59768 71 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 ZNF324BQ6AW86 544 aaPredicted RBP18.25■□□□□ 0.51
PTPRF-207ENST00000436724 CYYR1Q96J86 154 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 C20orf85Q9H1P6 137 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 PLSCR4Q9NRQ2 329 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 NKIRAS2Q9NYR9 191 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 CHD8Q9HCK8 2581 aa18.25■□□□□ 0.51
PTPRF-207ENST00000436724 IGKV1-27A0A075B6S5 117 aa18.24■□□□□ 0.51
PTPRF-207ENST00000436724 NRASP01111 189 aa18.24■□□□□ 0.51
PTPRF-207ENST00000436724 SERPINA5P05154 406 aa18.24■□□□□ 0.51
PTPRF-207ENST00000436724 PRSS3P35030 304 aa18.24■□□□□ 0.51
PTPRF-207ENST00000436724 TMPRSS3P57727 454 aa18.24■□□□□ 0.51
PTPRF-207ENST00000436724 CXADRP78310 365 aa18.24■□□□□ 0.51
PTPRF-207ENST00000436724 TMEM42Q69YG0 159 aa18.24■□□□□ 0.51
PTPRF-207ENST00000436724 GABRG1Q8N1C3 465 aa18.24■□□□□ 0.51
PTPRF-207ENST00000436724 PNLDC1Q8NA58 520 aaKnown RBP18.24■□□□□ 0.51
PTPRF-207ENST00000436724 SLC30A7Q8NEW0 376 aa18.24■□□□□ 0.51
PTPRF-207ENST00000436724 OR10K1Q8NGX5 313 aa18.24■□□□□ 0.51
PTPRF-207ENST00000436724 TNFAIP8L1Q8WVP5 186 aa18.24■□□□□ 0.51
PTPRF-207ENST00000436724 PIGCQ92535 297 aa18.24■□□□□ 0.51
PTPRF-207ENST00000436724 APOBEC3DQ96AK3 386 aaPredicted RBP18.24■□□□□ 0.51
PTPRF-207ENST00000436724 REPIN1Q9BWE0 567 aaKnown RBP18.24■□□□□ 0.51
PTPRF-207ENST00000436724 PTTG3PQ9NZH4 202 aa18.24■□□□□ 0.51
PTPRF-207ENST00000436724 CRIM1Q9NZV1 1036 aa18.24■□□□□ 0.51
PTPRF-207ENST00000436724 MEIKINA0A087WXM9 373 aa18.24■□□□□ 0.51
PTPRF-207ENST00000436724 ANKRD20A5PA0PJZ0 165 aa18.24■□□□□ 0.51
PTPRF-207ENST00000436724 METTL21EPA6NDL7 271 aa18.24■□□□□ 0.51
PTPRF-207ENST00000436724 TMEM235A6NFC5 223 aa18.24■□□□□ 0.51
PTPRF-207ENST00000436724 TPPPO94811 219 aa18.24■□□□□ 0.51
PTPRF-207ENST00000436724 ECDO95905 644 aaPredicted RBP18.24■□□□□ 0.51
PTPRF-207ENST00000436724 MTCP1P56278 107 aa18.24■□□□□ 0.51
PTPRF-207ENST00000436724 UBE2NP61088 152 aaKnown RBP18.24■□□□□ 0.51
PTPRF-207ENST00000436724 CLVS2Q5SYC1 327 aa18.24■□□□□ 0.51
PTPRF-207ENST00000436724 PIAS4Q8N2W9 510 aaPredicted RBP18.24■□□□□ 0.51
PTPRF-207ENST00000436724 OR56B2PQ8NGI1 322 aa18.24■□□□□ 0.51
PTPRF-207ENST00000436724 C1QTNF6Q9BXI9 259 aa18.24■□□□□ 0.51
PTPRF-207ENST00000436724 LPAR5Q9H1C0 372 aa18.24■□□□□ 0.51
PTPRF-207ENST00000436724 A0A0A6YYD4 124 aa18.23■□□□□ 0.51
PTPRF-207ENST00000436724 H7C417 338 aa18.23■□□□□ 0.51
PTPRF-207ENST00000436724 CDC14BO60729 498 aa18.23■□□□□ 0.51
PTPRF-207ENST00000436724 CRTAPO75718 401 aaPredicted RBP18.23■□□□□ 0.51
PTPRF-207ENST00000436724 PLATP00750 562 aa18.23■□□□□ 0.51
PTPRF-207ENST00000436724 CGAP01215 116 aa18.23■□□□□ 0.51
PTPRF-207ENST00000436724 PSMB1P20618 241 aaKnown RBP18.23■□□□□ 0.51
PTPRF-207ENST00000436724 COX5AP20674 150 aa18.23■□□□□ 0.51
PTPRF-207ENST00000436724 IDH3GP51553 393 aaPredicted RBP18.23■□□□□ 0.51
PTPRF-207ENST00000436724 KRTCAP3Q53RY4 240 aa18.23■□□□□ 0.51
PTPRF-207ENST00000436724 C1QTNF12Q5T7M4 302 aa18.23■□□□□ 0.51
PTPRF-207ENST00000436724 DPPA2Q7Z7J5 298 aa18.23■□□□□ 0.51
PTPRF-207ENST00000436724 FBLN5Q9UBX5 448 aa18.23■□□□□ 0.51
PTPRF-207ENST00000436724 MTFP1Q9UDX5 166 aa18.23■□□□□ 0.51
PTPRF-207ENST00000436724 PEX14O75381 377 aa18.23■□□□□ 0.51
PTPRF-207ENST00000436724 RBBP9O75884 186 aa18.23■□□□□ 0.51
PTPRF-207ENST00000436724 CNOT4O95628 575 aaKnown RBP18.23■□□□□ 0.51
PTPRF-207ENST00000436724 NAT2P11245 290 aa18.23■□□□□ 0.51
PTPRF-207ENST00000436724 ZNF14P17017 642 aaPredicted RBP18.23■□□□□ 0.51
PTPRF-207ENST00000436724 ZP1P60852 638 aa18.23■□□□□ 0.51
PTPRF-207ENST00000436724 PCGF3Q3KNV8 242 aa18.23■□□□□ 0.51
PTPRF-207ENST00000436724 CHST4Q8NCG5 386 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms