RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 LINC01006Q8NI28 216 aa15.18■□□□□ 0.02
SREBF1-206ENST00000423161 NPRL2Q8WTW4 380 aa15.18■□□□□ 0.02
SREBF1-206ENST00000423161 GAFA1Q96PS6 74 aa15.18■□□□□ 0.02
SREBF1-206ENST00000423161 ZNF556Q9HAH1 456 aa15.18■□□□□ 0.02
SREBF1-206ENST00000423161 ZNRD1Q9P1U0 126 aa15.18■□□□□ 0.02
SREBF1-206ENST00000423161 CMYA5Q8N3K9 4069 aa15.18■□□□□ 0.02
SREBF1-206ENST00000423161 TGP01266 2768 aa15.18■□□□□ 0.02
SREBF1-206ENST00000423161 NOTCH1P46531 2555 aa15.17■□□□□ 0.02
SREBF1-206ENST00000423161 A0A1W2PRD5 423 aa15.17■□□□□ 0.02
SREBF1-206ENST00000423161 A0A1W2PRF3 423 aa15.17■□□□□ 0.02
SREBF1-206ENST00000423161 A0A1W2PRM7 423 aa15.17■□□□□ 0.02
SREBF1-206ENST00000423161 BTBD17A6NE02 478 aa15.17■□□□□ 0.02
SREBF1-206ENST00000423161 M0QZ24 198 aa15.17■□□□□ 0.02
SREBF1-206ENST00000423161 TIMM23O14925 209 aa15.17■□□□□ 0.02
SREBF1-206ENST00000423161 E2F6O75461 281 aa15.17■□□□□ 0.02
SREBF1-206ENST00000423161 DCTDP32321 178 aa15.17■□□□□ 0.02
SREBF1-206ENST00000423161 GPM6AP51674 278 aa15.17■□□□□ 0.02
SREBF1-206ENST00000423161 KRTAP10-3P60369 221 aa15.17■□□□□ 0.02
SREBF1-206ENST00000423161 CDK5Q00535 292 aa15.17■□□□□ 0.02
SREBF1-206ENST00000423161 TAF9Q16594 264 aa15.17■□□□□ 0.02
SREBF1-206ENST00000423161 OCLNQ16625 522 aa15.17■□□□□ 0.02
SREBF1-206ENST00000423161 FAM76BQ5HYJ3 339 aa15.17■□□□□ 0.02
SREBF1-206ENST00000423161 HS3ST5Q8IZT8 346 aa15.17■□□□□ 0.02
SREBF1-206ENST00000423161 ANGPTL6Q8NI99 470 aa15.17■□□□□ 0.02
SREBF1-206ENST00000423161 FAM81AQ8TBF8 368 aa15.17■□□□□ 0.02
SREBF1-206ENST00000423161 MED30Q96HR3 178 aa15.17■□□□□ 0.02
SREBF1-206ENST00000423161 HIST1H2AAQ96QV6 131 aa15.17■□□□□ 0.02
SREBF1-206ENST00000423161 THTPAQ9BU02 230 aa15.17■□□□□ 0.02
SREBF1-206ENST00000423161 NLKQ9UBE8 527 aa15.17■□□□□ 0.02
SREBF1-206ENST00000423161 SLC25A10Q9UBX3 287 aaPredicted RBP15.17■□□□□ 0.02
SREBF1-206ENST00000423161 LAMP5Q9UJQ1 280 aa15.17■□□□□ 0.02
SREBF1-206ENST00000423161 AQP12BA6NM10 295 aa15.16■□□□□ 0.02
SREBF1-206ENST00000423161 NPFFO15130 113 aa15.16■□□□□ 0.02
SREBF1-206ENST00000423161 SIGLEC5O15389 551 aa15.16■□□□□ 0.02
SREBF1-206ENST00000423161 SLC2A5P22732 501 aa15.16■□□□□ 0.02
SREBF1-206ENST00000423161 MAP2K3P46734 347 aa15.16■□□□□ 0.02
SREBF1-206ENST00000423161 DGUOKQ16854 277 aa15.16■□□□□ 0.02
SREBF1-206ENST00000423161 DHRS7BQ6IAN0 325 aaPredicted RBP15.16■□□□□ 0.02
SREBF1-206ENST00000423161 AQP12AQ8IXF9 295 aa15.16■□□□□ 0.02
SREBF1-206ENST00000423161 PAPD5Q8NDF8 572 aaKnown RBP15.16■□□□□ 0.02
SREBF1-206ENST00000423161 C1orf21Q9H246 121 aa15.16■□□□□ 0.02
SREBF1-206ENST00000423161 VPREB3Q9UKI3 123 aa15.16■□□□□ 0.02
SREBF1-206ENST00000423161 ZNF816-ZNF321PA0A0X1KG74 233 aa15.15■□□□□ 0.02
SREBF1-206ENST00000423161 A0A1W2PQ09 198 aa15.15■□□□□ 0.02
SREBF1-206ENST00000423161 OR2AT4A6NND4 320 aa15.15■□□□□ 0.02
SREBF1-206ENST00000423161 CLPXO76031 633 aa15.15■□□□□ 0.02
SREBF1-206ENST00000423161 FAM107AO95990 144 aa15.15■□□□□ 0.02
SREBF1-206ENST00000423161 ACAA1P09110 424 aaPredicted RBP15.15■□□□□ 0.02
SREBF1-206ENST00000423161 ANXA8P13928 327 aa15.15■□□□□ 0.02
SREBF1-206ENST00000423161 HOXB6P17509 224 aaKnown RBP15.15■□□□□ 0.02
SREBF1-206ENST00000423161 NDUFB7P17568 137 aa15.15■□□□□ 0.02
SREBF1-206ENST00000423161 ALOX5APP20292 161 aa15.15■□□□□ 0.02
SREBF1-206ENST00000423161 PRKACGP22612 351 aa15.15■□□□□ 0.02
SREBF1-206ENST00000423161 GLRA1P23415 457 aa15.15■□□□□ 0.02
SREBF1-206ENST00000423161 GABRA2P47869 451 aa15.15■□□□□ 0.02
SREBF1-206ENST00000423161 HCCSP53701 268 aa15.15■□□□□ 0.02
SREBF1-206ENST00000423161 CAV3P56539 151 aa15.15■□□□□ 0.02
SREBF1-206ENST00000423161 PROK1P58294 105 aa15.15■□□□□ 0.02
SREBF1-206ENST00000423161 APOFQ13790 326 aa15.15■□□□□ 0.02
SREBF1-206ENST00000423161 TMEM236Q5W0B7 351 aa15.15■□□□□ 0.02
SREBF1-206ENST00000423161 Q6ZSV7 163 aa15.15■□□□□ 0.02
SREBF1-206ENST00000423161 ZSCAN4Q8NAM6 433 aaPredicted RBP15.15■□□□□ 0.02
SREBF1-206ENST00000423161 TNFRSF14Q92956 283 aa15.15■□□□□ 0.02
SREBF1-206ENST00000423161 TEX12Q9BXU0 123 aa15.15■□□□□ 0.02
SREBF1-206ENST00000423161 YIPF3Q9GZM5 350 aa15.15■□□□□ 0.02
SREBF1-206ENST00000423161 SLC25A19Q9HC21 320 aa15.15■□□□□ 0.02
SREBF1-206ENST00000423161 A0A0U1RQV5 110 aa15.14■□□□□ 0.01
SREBF1-206ENST00000423161 ZNF732B4DXR9 585 aa15.14■□□□□ 0.01
SREBF1-206ENST00000423161 M0R1W7 72 aa15.14■□□□□ 0.01
SREBF1-206ENST00000423161 PSMD9O00233 223 aa15.14■□□□□ 0.01
SREBF1-206ENST00000423161 RHBDL1O75783 438 aa15.14■□□□□ 0.01
SREBF1-206ENST00000423161 PAHP00439 452 aa15.14■□□□□ 0.01
SREBF1-206ENST00000423161 SAA4P35542 130 aa15.14■□□□□ 0.01
SREBF1-206ENST00000423161 GNG3P63215 75 aa15.14■□□□□ 0.01
SREBF1-206ENST00000423161 CEP78Q5JTW2 689 aa15.14■□□□□ 0.01
SREBF1-206ENST00000423161 NCR3LG1Q68D85 454 aa15.14■□□□□ 0.01
SREBF1-206ENST00000423161 ASPHD2Q6ICH7 369 aa15.14■□□□□ 0.01
SREBF1-206ENST00000423161 KCTD18Q6PI47 426 aaPredicted RBP15.14■□□□□ 0.01
SREBF1-206ENST00000423161 C1orf122Q6ZSJ8 110 aa15.14■□□□□ 0.01
SREBF1-206ENST00000423161 COMMD2Q86X83 199 aa15.14■□□□□ 0.01
SREBF1-206ENST00000423161 PNKDQ8N490 385 aa15.14■□□□□ 0.01
SREBF1-206ENST00000423161 MMP27Q9H306 513 aa15.14■□□□□ 0.01
SREBF1-206ENST00000423161 ELL3Q9HB65 397 aaPredicted RBP15.14■□□□□ 0.01
SREBF1-206ENST00000423161 FAM206AQ9NX38 181 aa15.14■□□□□ 0.01
SREBF1-206ENST00000423161 TET2Q6N021 2002 aaPredicted RBP15.14■□□□□ 0.01
SREBF1-206ENST00000423161 IGKV1D-17A0A075B6S4 117 aa15.13■□□□□ 0.01
SREBF1-206ENST00000423161 TMEM269A0A1B0GVZ9 245 aa15.13■□□□□ 0.01
SREBF1-206ENST00000423161 MEIOCA2RUB1 952 aa15.13■□□□□ 0.01
SREBF1-206ENST00000423161 ACOD1A6NK06 481 aa15.13■□□□□ 0.01
SREBF1-206ENST00000423161 MRPL3P09001 348 aaKnown RBP15.13■□□□□ 0.01
SREBF1-206ENST00000423161 BLMHQ13867 455 aa15.13■□□□□ 0.01
SREBF1-206ENST00000423161 SNAPC1Q16533 368 aa15.13■□□□□ 0.01
SREBF1-206ENST00000423161 CEACAM21Q3KPI0 293 aa15.13■□□□□ 0.01
SREBF1-206ENST00000423161 DMRTC1Q5HYR2 192 aa15.13■□□□□ 0.01
SREBF1-206ENST00000423161 DEGS2Q6QHC5 323 aa15.13■□□□□ 0.01
SREBF1-206ENST00000423161 TRPM8Q7Z2W7 1104 aa15.13■□□□□ 0.01
SREBF1-206ENST00000423161 SPATA24Q86W54 205 aa15.13■□□□□ 0.01
SREBF1-206ENST00000423161 TMEM185AQ8NFB2 350 aa15.13■□□□□ 0.01
SREBF1-206ENST00000423161 UBE2FQ969M7 185 aa15.13■□□□□ 0.01
SREBF1-206ENST00000423161 DUS3LQ96G46 650 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms