RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 MPPED2Q15777 294 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 TUSC1Q2TAM9 212 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 CDONQ4KMG0 1287 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 CCDC58Q4VC31 144 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 LRRC10Q5BKY1 277 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 OTPQ5XKR4 325 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 METAP1DQ6UB28 335 aaPredicted RBP5.34□□□□□ -1.55
USP54-202ENST00000413442 WDR82Q6UXN9 313 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 ZNF841Q6ZN19 808 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 SPATC1Q76KD6 591 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 C11orf53Q8IXP5 236 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 ENTHD1Q8IYW4 607 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 CMTM4Q8IZR5 234 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 CBR4Q8N4T8 237 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 KIR3DL3Q8N743 410 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 BBS1Q8NFJ9 593 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 OR51G2Q8NGK0 314 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 FAM216AQ8WUB2 273 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 THRSPQ92748 146 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 CPNE2Q96FN4 548 aaPredicted RBP5.34□□□□□ -1.55
USP54-202ENST00000413442 AMELYQ99218 206 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 PKIBQ9C010 78 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 OR51I2Q9H344 312 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 RIBC2Q9H4K1 309 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 PRDM13Q9H4Q3 707 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 NARFLQ9H6Q4 476 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 DCLRE1BQ9H816 532 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 CNTD2Q9H8S5 307 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 BRD7Q9NPI1 651 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 UFSP2Q9NUQ7 469 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 SMPD3Q9NY59 655 aaPredicted RBP5.34□□□□□ -1.55
USP54-202ENST00000413442 DNAJC27Q9NZQ0 273 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 ZNF319Q9P2F9 582 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 CAB39Q9Y376 341 aaPredicted RBP5.34□□□□□ -1.55
USP54-202ENST00000413442 N6AMT1Q9Y5N5 214 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 KPTNQ9Y664 436 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 ABCA2Q9BZC7 2435 aa5.34□□□□□ -1.56
USP54-202ENST00000413442 NAV3Q8IVL0 2385 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 A0A1W2PQL4 384 aaPredicted RBP5.33□□□□□ -1.56
USP54-202ENST00000413442 hCG_1807616A0A1W2PRN6 198 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 SAC3D1A6NKF1 404 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 ZNF850A8MQ14 1090 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 KIAA1324LA8MWY0 1029 aaPredicted RBP5.33□□□□□ -1.56
USP54-202ENST00000413442 TRAPPC2LH3BP13 241 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 CLDN34H7C241 214 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 J3QRE1 110 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 CDIPTO14735 213 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 PHF1O43189 567 aaPredicted RBP5.33□□□□□ -1.56
USP54-202ENST00000413442 ADAM20O43506 726 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 SYT7O43581 403 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 CYB5AP00167 134 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 CYB5R3P00387 301 aaPredicted RBP5.33□□□□□ -1.56
USP54-202ENST00000413442 MT-ND2P03891 347 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 CCDC159P0C7I6 412 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 PSKH1P11801 424 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 EPHA1P21709 976 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 GLRA1P23415 457 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 MPZP25189 248 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 ZFP36P26651 326 aaKnown RBP5.33□□□□□ -1.56
USP54-202ENST00000413442 POLR2IP36954 125 aaKnown RBP5.33□□□□□ -1.56
USP54-202ENST00000413442 RANBP1P43487 201 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 BMXP51813 675 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 HCCSP53701 268 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 ATP1B3P54709 279 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 HILS1P60008 231 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 IL13RA1P78552 427 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 IL24Q13007 206 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 BLMHQ13867 455 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 CNN3Q15417 329 aaKnown RBP5.33□□□□□ -1.56
USP54-202ENST00000413442 SPRNQ5BIV9 151 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 ARMCX4Q5H9R4 360 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 ZNF788Q6ZQV5 615 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 MOB3CQ70IA8 216 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 UTS2BQ765I0 119 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 COMMD2Q86X83 199 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 CATSPERDQ86XM0 798 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 MKXQ8IYA7 352 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 BPIFB2Q8N4F0 458 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 ZNF561Q8N587 486 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 DHRSXQ8N5I4 330 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 SCCPDHQ8NBX0 429 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 LY6G5BQ8NDX9 201 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 OR10H4Q8NGA5 316 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 OR5D13Q8NGL4 314 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 OR14K1Q8NGZ2 314 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 C8orf46Q8TAG6 207 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 OR51E1Q8TCB6 317 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 LRRC29Q8WV35 223 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 AQP3Q92482 292 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 DACT3Q96B18 629 aaPredicted RBP5.33□□□□□ -1.56
USP54-202ENST00000413442 SPSB1Q96BD6 273 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 TMIGD2Q96BF3 282 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 FAM71F1Q96KD3 344 aaPredicted RBP5.33□□□□□ -1.56
USP54-202ENST00000413442 LYZL4Q96KX0 146 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 NUDT16L1Q9BRJ7 211 aaKnown RBP5.33□□□□□ -1.56
USP54-202ENST00000413442 FAM234AQ9H0X4 552 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 METTL17Q9H7H0 456 aaPredicted RBP5.33□□□□□ -1.56
USP54-202ENST00000413442 UNKLQ9H9P5 680 aaKnown RBP5.33□□□□□ -1.56
USP54-202ENST00000413442 PLEKHA1Q9HB21 404 aa5.33□□□□□ -1.56
USP54-202ENST00000413442 FGF20Q9NP95 211 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms