RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 TSPAN31Q12999 210 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 PLA2G7Q13093 441 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 EXOSC7Q15024 291 aaKnown RBP3.98□□□□□ -1.77
SF3B1-202ENST00000409915 INPP5JQ15735 1006 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-202ENST00000409915 USF2Q15853 346 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-202ENST00000409915 EXT1Q16394 746 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 NNATQ16517 81 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 TIMM50Q3ZCQ8 353 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 RFTN2Q52LD8 501 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-202ENST00000409915 ZNF385BQ569K4 471 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 SPIN4Q56A73 249 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 ABHD17BQ5VST6 288 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 HACD4Q5VWC8 232 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 FBXW9Q5XUX1 488 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 NOXRED1Q6NXP6 359 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 HAGHLQ6PII5 290 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-202ENST00000409915 KCNIP4Q6PIL6 250 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 TBPL2Q6SJ96 375 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 PAMR1Q6UXH9 720 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 TMEM64Q6YI46 380 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 TMPRSS11AQ6ZMR5 421 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 COLCA1Q6ZS62 124 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 BHLHA15Q7RTS1 189 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-202ENST00000409915 TMEM17Q86X19 198 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 C1QL4Q86Z23 238 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 C9orf40Q8IXQ3 194 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 TMEM123Q8N131 208 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 FAM86B1Q8N7N1 296 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 CPEB3Q8NE35 698 aaKnown RBP3.98□□□□□ -1.77
SF3B1-202ENST00000409915 ZNF555Q8NEP9 628 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 B3GNT7Q8NFL0 401 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 OR5M9Q8NGP3 310 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 OR5M8Q8NGP6 311 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 OR9A2Q8NGT5 310 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 OR1S1Q8NH92 325 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 STOML3Q8TAV4 291 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 M1APQ8TC57 530 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 ZNF721Q8TF20 911 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 SPRYD4Q8WW59 207 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-202ENST00000409915 ACOT11Q8WXI4 607 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-202ENST00000409915 C22orf15Q8WYQ4 148 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 ERGIC1Q969X5 290 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 TMEM45BQ96B21 275 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 NOL4LQ96MY1 436 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-202ENST00000409915 WFIKKN1Q96NZ8 548 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 ERMAPQ96PL5 475 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-202ENST00000409915 TSSK3Q96PN8 268 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 BEX2Q9BXY8 128 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 POTEKPQ9BYX7 375 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 BARHL1Q9BZE3 327 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 GABARAPL1Q9H0R8 117 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 TUBA4BQ9H853 241 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 EML4Q9HC35 981 aaKnown RBP3.98□□□□□ -1.77
SF3B1-202ENST00000409915 MIEF1Q9NQG6 463 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 CYSLTR2Q9NS75 346 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 TMEM45AQ9NWC5 275 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 C1orf109Q9NX04 203 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 MS4A12Q9NXJ0 267 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 SCN3BQ9NY72 215 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 ADA2Q9NZK5 511 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 CLEC2DQ9UHP7 191 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 UTS2RQ9UKP6 389 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 PACSIN3Q9UKS6 424 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 CES1P1Q9UKY3 287 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 CNTRLQ7Z7A1 2325 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 A0A0G2JMM0 328 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 A0A1B0GUH1 482 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 LOC100130705A0A1B0GUX0 176 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 A0A1W2PPB8 328 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 A0A1W2PRS3 328 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 PLSCR5A0PG75 271 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 RNF222A6NCQ9 220 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 OR5H15A6NDH6 313 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 ZNF503-AS2A6NEH8 195 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 HMSDA8MTL9 139 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 KIR3DP1A8MWS1 328 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 C1orf196B1AJZ1 125 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 INMT-MINDY4F8WBC2 141 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 G3V3Y1 287 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 RPL36A-HNRNPH2H7BZ11 118 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 SIGLEC5O15389 551 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 CFLARO15519 480 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 OR2J2O76002 312 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 NXPH3O95157 252 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 APOC3P02656 99 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 IGKV3-11P04433 115 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 CRYGBP07316 175 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 OR8U8P0C7N1 319 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 SLC35E2P0CK97 266 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 BCKDHAP12694 445 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 NR2C1P13056 603 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 CPMP14384 443 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 NCK1P16333 377 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 BMP5P22003 454 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 GADD45AP24522 165 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 STOMP27105 288 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 G0S2P27469 103 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 PSMB6P28072 239 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 SLC6A1P30531 599 aa3.97□□□□□ -1.77
SF3B1-202ENST00000409915 DCTDP32321 178 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms