RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 PPP1R3EQ9H7J1 279 aa17.44■□□□□ 0.38
PDGFA-204ENST00000405692 ERVK13-1Q9NX77 482 aa17.44■□□□□ 0.38
PDGFA-204ENST00000405692 NKX1-2Q9UD57 310 aaPredicted RBP17.44■□□□□ 0.38
PDGFA-204ENST00000405692 MYRFQ9Y2G1 1151 aa17.44■□□□□ 0.38
PDGFA-204ENST00000405692 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.43■□□□□ 0.38
PDGFA-204ENST00000405692 A8MXK9 166 aa17.43■□□□□ 0.38
PDGFA-204ENST00000405692 J3QLI3 93 aa17.43■□□□□ 0.38
PDGFA-204ENST00000405692 CDIPTO14735 213 aa17.43■□□□□ 0.38
PDGFA-204ENST00000405692 LHBP01229 141 aa17.43■□□□□ 0.38
PDGFA-204ENST00000405692 SRD5A1P18405 259 aa17.43■□□□□ 0.38
PDGFA-204ENST00000405692 THBS2P35442 1172 aa17.43■□□□□ 0.38
PDGFA-204ENST00000405692 GPM6AP51674 278 aa17.43■□□□□ 0.38
PDGFA-204ENST00000405692 CCR9P51686 369 aa17.43■□□□□ 0.38
PDGFA-204ENST00000405692 LCN2P80188 198 aa17.43■□□□□ 0.38
PDGFA-204ENST00000405692 MED21Q13503 144 aa17.43■□□□□ 0.38
PDGFA-204ENST00000405692 ODF4Q2M2E3 257 aa17.43■□□□□ 0.38
PDGFA-204ENST00000405692 CEP78Q5JTW2 689 aa17.43■□□□□ 0.38
PDGFA-204ENST00000405692 DCAF12L2Q5VW00 463 aa17.43■□□□□ 0.38
PDGFA-204ENST00000405692 FAHD2BQ6P2I3 314 aaPredicted RBP17.43■□□□□ 0.38
PDGFA-204ENST00000405692 WDR82Q6UXN9 313 aa17.43■□□□□ 0.38
PDGFA-204ENST00000405692 C11orf53Q8IXP5 236 aa17.43■□□□□ 0.38
PDGFA-204ENST00000405692 PRSS35Q8N3Z0 413 aa17.43■□□□□ 0.38
PDGFA-204ENST00000405692 GCSAMQ8N6F7 178 aa17.43■□□□□ 0.38
PDGFA-204ENST00000405692 DEFB108BQ8NET1 73 aa17.43■□□□□ 0.38
PDGFA-204ENST00000405692 CNIH3Q8TBE1 160 aa17.43■□□□□ 0.38
PDGFA-204ENST00000405692 HPSE2Q8WWQ2 592 aa17.43■□□□□ 0.38
PDGFA-204ENST00000405692 FAHD2AQ96GK7 314 aa17.43■□□□□ 0.38
PDGFA-204ENST00000405692 JAM3Q9BX67 310 aa17.43■□□□□ 0.38
PDGFA-204ENST00000405692 FGF20Q9NP95 211 aaPredicted RBP17.43■□□□□ 0.38
PDGFA-204ENST00000405692 POLR3KQ9Y2Y1 108 aaPredicted RBP17.43■□□□□ 0.38
PDGFA-204ENST00000405692 ZNF732B4DXR9 585 aa17.42■□□□□ 0.38
PDGFA-204ENST00000405692 H0YJX3 145 aa17.42■□□□□ 0.38
PDGFA-204ENST00000405692 SERPINA3P01011 423 aa17.42■□□□□ 0.38
PDGFA-204ENST00000405692 MUC1P15941 1255 aaPredicted RBP17.42■□□□□ 0.38
PDGFA-204ENST00000405692 CD80P33681 288 aa17.42■□□□□ 0.38
PDGFA-204ENST00000405692 SRP14P37108 136 aaKnown RBP17.42■□□□□ 0.38
PDGFA-204ENST00000405692 GNB2P62879 340 aa17.42■□□□□ 0.38
PDGFA-204ENST00000405692 CSNK2BP67870 215 aa17.42■□□□□ 0.38
PDGFA-204ENST00000405692 SMN1Q16637 294 aaKnown RBP17.42■□□□□ 0.38
PDGFA-204ENST00000405692 MICBQ29980 383 aa17.42■□□□□ 0.38
PDGFA-204ENST00000405692 KRTAP21-3Q3LHN1 58 aa17.42■□□□□ 0.38
PDGFA-204ENST00000405692 TMEM42Q69YG0 159 aa17.42■□□□□ 0.38
PDGFA-204ENST00000405692 SFRP4Q6FHJ7 346 aaPredicted RBP17.42■□□□□ 0.38
PDGFA-204ENST00000405692 SCCPDHQ8NBX0 429 aa17.42■□□□□ 0.38
PDGFA-204ENST00000405692 PELI1Q96FA3 418 aa17.42■□□□□ 0.38
PDGFA-204ENST00000405692 TECTBQ96PL2 329 aa17.42■□□□□ 0.38
PDGFA-204ENST00000405692 SSBP3Q9BWW4 388 aaPredicted RBP17.42■□□□□ 0.38
PDGFA-204ENST00000405692 OR5V1Q9UGF6 321 aa17.42■□□□□ 0.38
PDGFA-204ENST00000405692 MALRD1Q5VYJ5 2156 aa17.41■□□□□ 0.38
PDGFA-204ENST00000405692 LOC107986453A0A1B0GWG9 222 aa17.41■□□□□ 0.38
PDGFA-204ENST00000405692 C3orf80F5H4A9 247 aa17.41■□□□□ 0.38
PDGFA-204ENST00000405692 GATBO75879 557 aaKnown RBP17.41■□□□□ 0.38
PDGFA-204ENST00000405692 ISG15P05161 165 aa17.41■□□□□ 0.38
PDGFA-204ENST00000405692 NPY4RP50391 375 aa17.41■□□□□ 0.38
PDGFA-204ENST00000405692 GBX2P52951 348 aaPredicted RBP17.41■□□□□ 0.38
PDGFA-204ENST00000405692 TEX36Q5VZQ5 186 aa17.41■□□□□ 0.38
PDGFA-204ENST00000405692 ZNF671Q8TAW3 534 aa17.41■□□□□ 0.38
PDGFA-204ENST00000405692 RPL3LQ92901 407 aaKnown RBP17.41■□□□□ 0.38
PDGFA-204ENST00000405692 METTL17Q9H7H0 456 aaPredicted RBP17.41■□□□□ 0.38
PDGFA-204ENST00000405692 CHCHD3Q9NX63 227 aaKnown RBP17.41■□□□□ 0.38
PDGFA-204ENST00000405692 FRRS1LQ9P0K9 344 aa17.41■□□□□ 0.38
PDGFA-204ENST00000405692 ERVK-18Q9QC07 812 aa17.41■□□□□ 0.38
PDGFA-204ENST00000405692 CLN8Q9UBY8 286 aa17.41■□□□□ 0.38
PDGFA-204ENST00000405692 SLC7A11Q9UPY5 501 aa17.41■□□□□ 0.38
PDGFA-204ENST00000405692 NF1P21359 2839 aa17.4■□□□□ 0.38
PDGFA-204ENST00000405692 NIPBLQ6KC79 2804 aaeCLIP17.4■□□□□ 0.38
PDGFA-204ENST00000405692 ANKRD61A6NGH8 418 aa17.4■□□□□ 0.38
PDGFA-204ENST00000405692 SRRM5B3KS81 715 aa17.4■□□□□ 0.38
PDGFA-204ENST00000405692 MYL12AP19105 171 aa17.4■□□□□ 0.38
PDGFA-204ENST00000405692 KIR3DL2P43630 455 aa17.4■□□□□ 0.38
PDGFA-204ENST00000405692 PITPNBP48739 271 aa17.4■□□□□ 0.38
PDGFA-204ENST00000405692 SCGB2A2Q13296 93 aa17.4■□□□□ 0.38
PDGFA-204ENST00000405692 ALKBH1Q13686 389 aaKnown RBP17.4■□□□□ 0.38
PDGFA-204ENST00000405692 TMPRSS11AQ6ZMR5 421 aa17.4■□□□□ 0.38
PDGFA-204ENST00000405692 ZNF573Q86YE8 665 aa17.4■□□□□ 0.38
PDGFA-204ENST00000405692 C19orf18Q8NEA5 215 aa17.4■□□□□ 0.38
PDGFA-204ENST00000405692 PP6455Q8WZ26 134 aa17.4■□□□□ 0.38
PDGFA-204ENST00000405692 C12orf43Q96C57 262 aaKnown RBP17.4■□□□□ 0.38
PDGFA-204ENST00000405692 OR51I2Q9H344 312 aa17.4■□□□□ 0.38
PDGFA-204ENST00000405692 EXOSC1Q9Y3B2 195 aaKnown RBP17.4■□□□□ 0.38
PDGFA-204ENST00000405692 ZFHX3Q15911 3703 aa17.39■□□□□ 0.37
PDGFA-204ENST00000405692 CCDC159P0C7I6 412 aa17.39■□□□□ 0.37
PDGFA-204ENST00000405692 ZFP36P26651 326 aaKnown RBP17.39■□□□□ 0.37
PDGFA-204ENST00000405692 SEC61A1P61619 476 aaKnown RBP17.39■□□□□ 0.37
PDGFA-204ENST00000405692 ZNF676Q8N7Q3 588 aa17.39■□□□□ 0.37
PDGFA-204ENST00000405692 TFAP2CQ92754 450 aa17.39■□□□□ 0.37
PDGFA-204ENST00000405692 TMEM80Q96HE8 168 aa17.39■□□□□ 0.37
PDGFA-204ENST00000405692 ISG20L2Q9H9L3 353 aaKnown RBP17.39■□□□□ 0.37
PDGFA-204ENST00000405692 GPR173Q9NS66 373 aa17.39■□□□□ 0.37
PDGFA-204ENST00000405692 DNAJB11Q9UBS4 358 aa17.39■□□□□ 0.37
PDGFA-204ENST00000405692 HHLA2Q9UM44 414 aa17.39■□□□□ 0.37
PDGFA-204ENST00000405692 DIMT1Q9UNQ2 313 aaKnown RBP17.39■□□□□ 0.37
PDGFA-204ENST00000405692 CAB39Q9Y376 341 aaPredicted RBP17.39■□□□□ 0.37
PDGFA-204ENST00000405692 ABCA2Q9BZC7 2435 aa17.38■□□□□ 0.37
PDGFA-204ENST00000405692 EFCAB10A6NFE3 127 aa17.38■□□□□ 0.37
PDGFA-204ENST00000405692 ADAM20O43506 726 aa17.38■□□□□ 0.37
PDGFA-204ENST00000405692 TGM4P49221 684 aa17.38■□□□□ 0.37
PDGFA-204ENST00000405692 NANOS3P60323 173 aaKnown RBP17.38■□□□□ 0.37
PDGFA-204ENST00000405692 LYPD2Q6UXB3 125 aa17.38■□□□□ 0.37
PDGFA-204ENST00000405692 BTNL3Q6UXE8 466 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms