RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 MELTFP08582 738 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 NAT2P11245 290 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 MECP2P51608 486 aaKnown RBP13.07□□□□□ -0.32
SCAF11-204ENST00000395454 ACTBP60709 375 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 ACTG1P63261 375 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 TBRG1Q3YBR2 411 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 ATAD3CQ5T2N8 411 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 Q6ZT83 130 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 BEND4Q6ZU67 534 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 DPPA2Q7Z7J5 298 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 MRGPRGQ86SM5 289 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 ITFG2Q969R8 447 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 SEH1LQ96EE3 360 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 C1QTNF5Q9BXJ0 243 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 B3GNT2Q9NY97 397 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 ZNF221Q9UK13 617 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 CNOT4O95628 575 aaKnown RBP13.07□□□□□ -0.32
SCAF11-204ENST00000395454 PATE4P0C8F1 98 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 PSMB1P20618 241 aaKnown RBP13.07□□□□□ -0.32
SCAF11-204ENST00000395454 CCR6P51684 374 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 RRAS2P62070 204 aaPredicted RBP13.07□□□□□ -0.32
SCAF11-204ENST00000395454 OR8B8Q15620 311 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 UBE2V2Q15819 145 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 GFOD2Q3B7J2 385 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 MOGAT2Q3SYC2 334 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 PABPC1L2AQ5JQF8 200 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 AWAT2Q6E213 333 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 OR10K2Q6IF99 312 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 RNF144BQ7Z419 303 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 ANGPTL5Q86XS5 388 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 REEP6Q96HR9 211 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 TRAF4Q9BUZ4 470 aaPredicted RBP13.07□□□□□ -0.32
SCAF11-204ENST00000395454 MRPS28Q9Y2Q9 187 aaKnown RBP13.07□□□□□ -0.32
SCAF11-204ENST00000395454 USP9XQ93008 2570 aaPredicted RBP13.07□□□□□ -0.32
SCAF11-204ENST00000395454 A8MXE2 369 aa13.06□□□□□ -0.32
SCAF11-204ENST00000395454 J3QKU1 62 aa13.06□□□□□ -0.32
SCAF11-204ENST00000395454 FAHP16930 419 aa13.06□□□□□ -0.32
SCAF11-204ENST00000395454 ACKR3P25106 362 aa13.06□□□□□ -0.32
SCAF11-204ENST00000395454 FAUP35544 74 aaKnown RBP13.06□□□□□ -0.32
SCAF11-204ENST00000395454 TNK1Q13470 666 aa13.06□□□□□ -0.32
SCAF11-204ENST00000395454 CDSNQ15517 529 aa13.06□□□□□ -0.32
SCAF11-204ENST00000395454 KISS1Q15726 138 aa13.06□□□□□ -0.32
SCAF11-204ENST00000395454 FAM189A2Q15884 450 aa13.06□□□□□ -0.32
SCAF11-204ENST00000395454 ZNF260Q3ZCT1 412 aa13.06□□□□□ -0.32
SCAF11-204ENST00000395454 ZNF474Q6S9Z5 364 aaPredicted RBP13.06□□□□□ -0.32
SCAF11-204ENST00000395454 TCTE3Q8IZS6 198 aa13.06□□□□□ -0.32
SCAF11-204ENST00000395454 CPEB3Q8NE35 698 aaKnown RBP13.06□□□□□ -0.32
SCAF11-204ENST00000395454 SEMA6DQ8NFY4 1073 aa13.06□□□□□ -0.32
SCAF11-204ENST00000395454 KCNG3Q8TAE7 436 aa13.06□□□□□ -0.32
SCAF11-204ENST00000395454 UBASH3BQ8TF42 649 aa13.06□□□□□ -0.32
SCAF11-204ENST00000395454 FAM46BQ96A09 425 aa13.06□□□□□ -0.32
SCAF11-204ENST00000395454 SPSB1Q96BD6 273 aa13.06□□□□□ -0.32
SCAF11-204ENST00000395454 C20orf85Q9H1P6 137 aa13.06□□□□□ -0.32
SCAF11-204ENST00000395454 PIGLQ9Y2B2 252 aa13.06□□□□□ -0.32
SCAF11-204ENST00000395454 hCG_38984A0A1B0GV85 526 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 XRCC2O43543 280 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 AGFG2O95081 481 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 CHRM2P08172 466 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 H2AFB2P0C5Z0 115 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 OR3A4PP47883 348 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 FOXG1P55316 489 aaPredicted RBP13.05□□□□□ -0.32
SCAF11-204ENST00000395454 GUCA2AQ02747 115 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 GSG1Q2KHT4 349 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 ZBTB37Q5TC79 503 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 GABRG1Q8N1C3 465 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 LILRB4Q8NHJ6 448 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 LPAR5Q9H1C0 372 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 A0A0A6YYJ9 748 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 NKX2-6A6NCS4 301 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 PEX14O75381 377 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 LYZL6O75951 148 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 NDUFB6O95139 128 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 LCATP04180 440 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 HCKP08631 526 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 IGHV1-2P23083 117 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 MPGP29372 298 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 RIPPLY1Q0D2K3 151 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 PCGF3Q3KNV8 242 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 GLIPR1L1Q6UWM5 242 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 TMEM229BQ8NBD8 167 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 ITLN2Q8WWU7 325 aaPredicted RBP13.05□□□□□ -0.32
SCAF11-204ENST00000395454 AKAP1Q92667 903 aaKnown RBP eCLIP13.05□□□□□ -0.32
SCAF11-204ENST00000395454 MRPL15Q9P015 296 aaKnown RBP13.05□□□□□ -0.32
SCAF11-204ENST00000395454 JKAMPQ9P055 326 aa13.05□□□□□ -0.32
SCAF11-204ENST00000395454 TRAV6A0A075B6T7 132 aa13.04□□□□□ -0.32
SCAF11-204ENST00000395454 ZNF503-AS2A6NEH8 195 aa13.04□□□□□ -0.32
SCAF11-204ENST00000395454 PRAF2O60831 178 aa13.04□□□□□ -0.32
SCAF11-204ENST00000395454 ARR3P36575 388 aa13.04□□□□□ -0.32
SCAF11-204ENST00000395454 PTGFRP43088 359 aa13.04□□□□□ -0.32
SCAF11-204ENST00000395454 CXorf67Q86X51 503 aaPredicted RBP13.04□□□□□ -0.32
SCAF11-204ENST00000395454 ZNF808Q8N4W9 903 aaPredicted RBP13.04□□□□□ -0.32
SCAF11-204ENST00000395454 FAM89BQ8N5H3 189 aa13.04□□□□□ -0.32
SCAF11-204ENST00000395454 PNLDC1Q8NA58 520 aaKnown RBP13.04□□□□□ -0.32
SCAF11-204ENST00000395454 OR4C16Q8NGL9 310 aa13.04□□□□□ -0.32
SCAF11-204ENST00000395454 OR2AE1Q8NHA4 323 aa13.04□□□□□ -0.32
SCAF11-204ENST00000395454 SPACA5Q96QH8 159 aa13.04□□□□□ -0.32
SCAF11-204ENST00000395454 KCNJ16Q9NPI9 418 aa13.04□□□□□ -0.32
SCAF11-204ENST00000395454 LOC100509620A0A075B734 347 aa13.03□□□□□ -0.32
SCAF11-204ENST00000395454 FOXI3A8MTJ6 420 aaPredicted RBP13.03□□□□□ -0.32
SCAF11-204ENST00000395454 CDC14BO60729 498 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms