RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 CMC2Q9NRP2 79 aa11.23□□□□□ -0.61
CXCL12-202ENST00000374426 NLKQ9UBE8 527 aa11.23□□□□□ -0.61
CXCL12-202ENST00000374426 SF3B6Q9Y3B4 125 aaKnown RBP11.23□□□□□ -0.61
CXCL12-202ENST00000374426 IGKV1D-17A0A075B6S4 117 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 FAM183AA6NL82 134 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 OR2AT4A6NND4 320 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 RIIAD1A6NNX1 92 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 RHBDL1O75783 438 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 IFNGP01579 166 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 PAX6P26367 422 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 POU1F1P28069 291 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 GSTT1P30711 240 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 MAGEA2P43356 314 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 BLMHQ13867 455 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 SNCBQ16143 134 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 C11orf88Q6PI97 169 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 KCTD8Q6ZWB6 473 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 TIGD4Q8IY51 512 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 ZNRF1Q8ND25 227 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 OR5D13Q8NGL4 314 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 OR4C13Q8NGP0 309 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 PIGCQ92535 297 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 RNF170Q96K19 258 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 LYZL4Q96KX0 146 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 FAM234AQ9H0X4 552 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 MEGF9Q9H1U4 602 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 ABCB9Q9NP78 766 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 VNN3Q9NY84 501 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 ZNF222Q9UK12 451 aa11.22□□□□□ -0.61
CXCL12-202ENST00000374426 H0YAE9 185 aa11.21□□□□□ -0.61
CXCL12-202ENST00000374426 ANGPTL7O43827 346 aa11.21□□□□□ -0.61
CXCL12-202ENST00000374426 H2BFMP0C1H6 154 aa11.21□□□□□ -0.61
CXCL12-202ENST00000374426 PSG2P11465 335 aa11.21□□□□□ -0.61
CXCL12-202ENST00000374426 ZNF3P17036 446 aa11.21□□□□□ -0.61
CXCL12-202ENST00000374426 GABRA2P47869 451 aa11.21□□□□□ -0.61
CXCL12-202ENST00000374426 FAM189A2Q15884 450 aa11.21□□□□□ -0.61
CXCL12-202ENST00000374426 LRRC75BQ2VPJ9 315 aa11.21□□□□□ -0.61
CXCL12-202ENST00000374426 CYP2R1Q6VVX0 501 aa11.21□□□□□ -0.61
CXCL12-202ENST00000374426 SHFQ7M4L6 423 aa11.21□□□□□ -0.61
CXCL12-202ENST00000374426 OR2T6Q8NHC8 308 aa11.21□□□□□ -0.61
CXCL12-202ENST00000374426 DGCR6LQ9BY27 220 aa11.21□□□□□ -0.61
CXCL12-202ENST00000374426 RANBP3Q9H6Z4 567 aaPredicted RBP11.21□□□□□ -0.61
CXCL12-202ENST00000374426 TRBV23-1A0A0A0MS06 115 aa11.2□□□□□ -0.62
CXCL12-202ENST00000374426 PIN1P1O15428 100 aa11.2□□□□□ -0.62
CXCL12-202ENST00000374426 CHST1O43916 411 aa11.2□□□□□ -0.62
CXCL12-202ENST00000374426 GLCEO94923 617 aa11.2□□□□□ -0.62
CXCL12-202ENST00000374426 ATP6V1B2P21281 511 aa11.2□□□□□ -0.62
CXCL12-202ENST00000374426 GLRA1P23415 457 aa11.2□□□□□ -0.62
CXCL12-202ENST00000374426 GPM6AP51674 278 aa11.2□□□□□ -0.62
CXCL12-202ENST00000374426 AANATQ16613 207 aa11.2□□□□□ -0.62
CXCL12-202ENST00000374426 MICAQ29983 383 aa11.2□□□□□ -0.62
CXCL12-202ENST00000374426 CPLX4Q7Z7G2 160 aa11.2□□□□□ -0.62
CXCL12-202ENST00000374426 MKXQ8IYA7 352 aa11.2□□□□□ -0.62
CXCL12-202ENST00000374426 ZDHHC23Q8IYP9 409 aa11.2□□□□□ -0.62
CXCL12-202ENST00000374426 FAM185AQ8N0U4 392 aa11.2□□□□□ -0.62
CXCL12-202ENST00000374426 IQCF1Q8N6M8 205 aa11.2□□□□□ -0.62
CXCL12-202ENST00000374426 TMEM185AQ8NFB2 350 aa11.2□□□□□ -0.62
CXCL12-202ENST00000374426 OR8B12Q8NGG6 310 aa11.2□□□□□ -0.62
CXCL12-202ENST00000374426 OTOSQ8NHW6 89 aa11.2□□□□□ -0.62
CXCL12-202ENST00000374426 PIFOQ8TCI5 191 aa11.2□□□□□ -0.62
CXCL12-202ENST00000374426 OR51I2Q9H344 312 aa11.2□□□□□ -0.62
CXCL12-202ENST00000374426 RAB18Q9NP72 206 aa11.2□□□□□ -0.62
CXCL12-202ENST00000374426 C19orf12Q9NSK7 152 aa11.2□□□□□ -0.62
CXCL12-202ENST00000374426 U3KQV3 271 aa11.2□□□□□ -0.62
CXCL12-202ENST00000374426 LYNP07948 512 aa11.19□□□□□ -0.62
CXCL12-202ENST00000374426 VSIG10L2P0DP72 767 aa11.19□□□□□ -0.62
CXCL12-202ENST00000374426 SPATS1Q496A3 300 aa11.19□□□□□ -0.62
CXCL12-202ENST00000374426 KRT74Q7RTS7 529 aa11.19□□□□□ -0.62
CXCL12-202ENST00000374426 REC114Q7Z4M0 266 aa11.19□□□□□ -0.62
CXCL12-202ENST00000374426 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.19□□□□□ -0.62
CXCL12-202ENST00000374426 LYG1Q8N1E2 194 aa11.19□□□□□ -0.62
CXCL12-202ENST00000374426 C11orf42Q8N5U0 333 aa11.19□□□□□ -0.62
CXCL12-202ENST00000374426 PAPD5Q8NDF8 572 aaKnown RBP11.19□□□□□ -0.62
CXCL12-202ENST00000374426 OTULINQ96BN8 352 aa11.19□□□□□ -0.62
CXCL12-202ENST00000374426 SDSLQ96GA7 329 aa11.19□□□□□ -0.62
CXCL12-202ENST00000374426 CLPTM1LQ96KA5 538 aa11.19□□□□□ -0.62
CXCL12-202ENST00000374426 NIPSNAP1Q9BPW8 284 aa11.19□□□□□ -0.62
CXCL12-202ENST00000374426 NPFFR1Q9GZQ6 430 aa11.19□□□□□ -0.62
CXCL12-202ENST00000374426 OR51V1Q9H2C8 321 aa11.19□□□□□ -0.62
CXCL12-202ENST00000374426 YY1AP1Q9H869 796 aa11.19□□□□□ -0.62
CXCL12-202ENST00000374426 ACTR3BQ9P1U1 418 aa11.19□□□□□ -0.62
CXCL12-202ENST00000374426 KLHDC2Q9Y2U9 406 aa11.19□□□□□ -0.62
CXCL12-202ENST00000374426 SAMHD1Q9Y3Z3 626 aaKnown RBP11.19□□□□□ -0.62
CXCL12-202ENST00000374426 TCRBV5S2A0A599 114 aa11.18□□□□□ -0.62
CXCL12-202ENST00000374426 ZNF732B4DXR9 585 aa11.18□□□□□ -0.62
CXCL12-202ENST00000374426 SNX3O60493 162 aa11.18□□□□□ -0.62
CXCL12-202ENST00000374426 SELENOFO60613 162 aa11.18□□□□□ -0.62
CXCL12-202ENST00000374426 ALX3O95076 343 aa11.18□□□□□ -0.62
CXCL12-202ENST00000374426 BMXP51813 675 aa11.18□□□□□ -0.62
CXCL12-202ENST00000374426 PSMA6P60900 246 aaKnown RBP11.18□□□□□ -0.62
CXCL12-202ENST00000374426 GNG3P63215 75 aa11.18□□□□□ -0.62
CXCL12-202ENST00000374426 CEACAM21Q3KPI0 293 aa11.18□□□□□ -0.62
CXCL12-202ENST00000374426 HSP90B2PQ58FF3 399 aa11.18□□□□□ -0.62
CXCL12-202ENST00000374426 OXLD1Q5BKU9 147 aa11.18□□□□□ -0.62
CXCL12-202ENST00000374426 DMRTC1Q5HYR2 192 aa11.18□□□□□ -0.62
CXCL12-202ENST00000374426 CD300LDQ6UXZ3 194 aa11.18□□□□□ -0.62
CXCL12-202ENST00000374426 DEFB107AQ8IZN7 70 aa11.18□□□□□ -0.62
CXCL12-202ENST00000374426 ZNF454Q8N9F8 522 aa11.18□□□□□ -0.62
CXCL12-202ENST00000374426 OR5K1Q8NHB7 308 aa11.18□□□□□ -0.62
CXCL12-202ENST00000374426 TEX47Q8TBZ9 253 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms