RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 SLC23A1Q9UHI7 598 aa14.54□□□□□ -0.08
SAMM50-201ENST00000350028 AHCTF1Q8WYP5 2266 aa14.53□□□□□ -0.08
SAMM50-201ENST00000350028 TSC22D2O75157 780 aa14.53□□□□□ -0.08
SAMM50-201ENST00000350028 CA11O75493 328 aa14.53□□□□□ -0.08
SAMM50-201ENST00000350028 RGS11O94810 467 aa14.53□□□□□ -0.08
SAMM50-201ENST00000350028 IGHV3-9P01782 118 aa14.53□□□□□ -0.08
SAMM50-201ENST00000350028 C4BPBP20851 252 aa14.53□□□□□ -0.08
SAMM50-201ENST00000350028 CPT2P23786 658 aa14.53□□□□□ -0.08
SAMM50-201ENST00000350028 HRH1P35367 487 aa14.53□□□□□ -0.08
SAMM50-201ENST00000350028 MTCP1P56278 107 aa14.53□□□□□ -0.08
SAMM50-201ENST00000350028 PER3P56645 1201 aa14.53□□□□□ -0.08
SAMM50-201ENST00000350028 ARG2P78540 354 aa14.53□□□□□ -0.08
SAMM50-201ENST00000350028 TGIF1Q15583 401 aa14.53□□□□□ -0.08
SAMM50-201ENST00000350028 ZNF766Q5HY98 468 aa14.53□□□□□ -0.08
SAMM50-201ENST00000350028 DMRTC1Q5HYR2 192 aa14.53□□□□□ -0.08
SAMM50-201ENST00000350028 TMEM42Q69YG0 159 aa14.53□□□□□ -0.08
SAMM50-201ENST00000350028 RTL6Q6ICC9 239 aa14.53□□□□□ -0.08
SAMM50-201ENST00000350028 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.53□□□□□ -0.08
SAMM50-201ENST00000350028 MCEMP1Q8IX19 187 aa14.53□□□□□ -0.08
SAMM50-201ENST00000350028 FTMTQ8N4E7 242 aa14.53□□□□□ -0.08
SAMM50-201ENST00000350028 TMEM178AQ8NBL3 297 aa14.53□□□□□ -0.08
SAMM50-201ENST00000350028 UXS1Q8NBZ7 420 aa14.53□□□□□ -0.08
SAMM50-201ENST00000350028 SNAPC3Q92966 411 aa14.53□□□□□ -0.08
SAMM50-201ENST00000350028 C1QTNF5Q9BXJ0 243 aa14.53□□□□□ -0.08
SAMM50-201ENST00000350028 PRDM14Q9GZV8 571 aa14.53□□□□□ -0.08
SAMM50-201ENST00000350028 DCHS1Q96JQ0 3298 aa14.53□□□□□ -0.08
SAMM50-201ENST00000350028 F5H5P2 479 aa14.52□□□□□ -0.08
SAMM50-201ENST00000350028 GOSR2O14653 212 aa14.52□□□□□ -0.08
SAMM50-201ENST00000350028 TOXO94900 526 aa14.52□□□□□ -0.08
SAMM50-201ENST00000350028 COX5BP10606 129 aa14.52□□□□□ -0.08
SAMM50-201ENST00000350028 SERPINA2P20848 420 aa14.52□□□□□ -0.08
SAMM50-201ENST00000350028 ARFRP1Q13795 201 aa14.52□□□□□ -0.08
SAMM50-201ENST00000350028 GK2Q14410 553 aaPredicted RBP14.52□□□□□ -0.08
SAMM50-201ENST00000350028 PPA1Q15181 289 aa14.52□□□□□ -0.08
SAMM50-201ENST00000350028 VAX1Q5SQQ9 334 aa14.52□□□□□ -0.08
SAMM50-201ENST00000350028 LHFPL2Q6ZUX7 228 aa14.52□□□□□ -0.08
SAMM50-201ENST00000350028 RTN4RL2Q86UN3 420 aa14.52□□□□□ -0.08
SAMM50-201ENST00000350028 SLC25A42Q86VD7 318 aa14.52□□□□□ -0.08
SAMM50-201ENST00000350028 OR8H1Q8NGG4 311 aa14.52□□□□□ -0.08
SAMM50-201ENST00000350028 APH1AQ96BI3 265 aa14.52□□□□□ -0.08
SAMM50-201ENST00000350028 METTL9Q9H1A3 318 aa14.52□□□□□ -0.08
SAMM50-201ENST00000350028 VSIG4Q9Y279 399 aa14.52□□□□□ -0.08
SAMM50-201ENST00000350028 MED13Q9UHV7 2174 aa14.52□□□□□ -0.08
SAMM50-201ENST00000350028 CEP250Q9BV73 2442 aa14.52□□□□□ -0.09
SAMM50-201ENST00000350028 hCG_38984A0A1B0GV85 526 aa14.52□□□□□ -0.09
SAMM50-201ENST00000350028 SPAARA0A1B0GVQ0 90 aa14.52□□□□□ -0.09
SAMM50-201ENST00000350028 RAD51DO75771 328 aa14.52□□□□□ -0.09
SAMM50-201ENST00000350028 SLC22A5O76082 557 aa14.52□□□□□ -0.09
SAMM50-201ENST00000350028 NRASP01111 189 aa14.52□□□□□ -0.09
SAMM50-201ENST00000350028 TMEM225BP0DP42 221 aa14.52□□□□□ -0.09
SAMM50-201ENST00000350028 BLVRBP30043 206 aaPredicted RBP14.52□□□□□ -0.09
SAMM50-201ENST00000350028 ZNF81P51508 661 aa14.52□□□□□ -0.09
SAMM50-201ENST00000350028 FAM3AP98173 230 aa14.52□□□□□ -0.09
SAMM50-201ENST00000350028 C2orf68Q2NKX9 166 aa14.52□□□□□ -0.09
SAMM50-201ENST00000350028 ZBTB37Q5TC79 503 aa14.52□□□□□ -0.09
SAMM50-201ENST00000350028 SPSB4Q96A44 273 aa14.52□□□□□ -0.09
SAMM50-201ENST00000350028 TECTBQ96PL2 329 aa14.52□□□□□ -0.09
SAMM50-201ENST00000350028 PECRQ9BY49 303 aa14.52□□□□□ -0.09
SAMM50-201ENST00000350028 LDAHQ9H6V9 325 aa14.52□□□□□ -0.09
SAMM50-201ENST00000350028 ELL3Q9HB65 397 aaPredicted RBP14.52□□□□□ -0.09
SAMM50-201ENST00000350028 B3GNT2Q9NY97 397 aa14.52□□□□□ -0.09
SAMM50-201ENST00000350028 OPN4Q9UHM6 478 aa14.52□□□□□ -0.09
SAMM50-201ENST00000350028 PLSCR5A0PG75 271 aa14.51□□□□□ -0.09
SAMM50-201ENST00000350028 SERPINE3A8MV23 424 aa14.51□□□□□ -0.09
SAMM50-201ENST00000350028 PMP2P02689 132 aa14.51□□□□□ -0.09
SAMM50-201ENST00000350028 HTR2BP41595 481 aa14.51□□□□□ -0.09
SAMM50-201ENST00000350028 RBP2P50120 134 aa14.51□□□□□ -0.09
SAMM50-201ENST00000350028 ZNF92Q03936 586 aa14.51□□□□□ -0.09
SAMM50-201ENST00000350028 OR8B8Q15620 311 aa14.51□□□□□ -0.09
SAMM50-201ENST00000350028 FAHD2BQ6P2I3 314 aaPredicted RBP14.51□□□□□ -0.09
SAMM50-201ENST00000350028 ASCL4Q6XD76 172 aa14.51□□□□□ -0.09
SAMM50-201ENST00000350028 COLCA1Q6ZS62 124 aa14.51□□□□□ -0.09
SAMM50-201ENST00000350028 HOGA1Q86XE5 327 aa14.51□□□□□ -0.09
SAMM50-201ENST00000350028 ARRDC1Q8N5I2 433 aa14.51□□□□□ -0.09
SAMM50-201ENST00000350028 OR10K1Q8NGX5 313 aa14.51□□□□□ -0.09
SAMM50-201ENST00000350028 BORCS8Q96FH0 119 aa14.51□□□□□ -0.09
SAMM50-201ENST00000350028 FAHD2AQ96GK7 314 aa14.51□□□□□ -0.09
SAMM50-201ENST00000350028 ZNF552Q9H707 407 aaPredicted RBP14.51□□□□□ -0.09
SAMM50-201ENST00000350028 HEXA-AS1Q9H8Q6 139 aa14.51□□□□□ -0.09
SAMM50-201ENST00000350028 CNTRLQ7Z7A1 2325 aa14.5□□□□□ -0.09
SAMM50-201ENST00000350028 TRGV5A0A0B4J1U4 118 aa14.5□□□□□ -0.09
SAMM50-201ENST00000350028 FAM230AA0A1W2PPH8 454 aa14.5□□□□□ -0.09
SAMM50-201ENST00000350028 SIX6O95475 246 aa14.5□□□□□ -0.09
SAMM50-201ENST00000350028 LIPCP11150 499 aa14.5□□□□□ -0.09
SAMM50-201ENST00000350028 ZNF35P13682 527 aa14.5□□□□□ -0.09
SAMM50-201ENST00000350028 FUT6P51993 359 aa14.5□□□□□ -0.09
SAMM50-201ENST00000350028 H2BFSP57053 126 aa14.5□□□□□ -0.09
SAMM50-201ENST00000350028 UBE2MP61081 183 aaKnown RBP14.5□□□□□ -0.09
SAMM50-201ENST00000350028 MICBQ29980 383 aa14.5□□□□□ -0.09
SAMM50-201ENST00000350028 C11orf88Q6PI97 169 aa14.5□□□□□ -0.09
SAMM50-201ENST00000350028 TEX261Q6UWH6 196 aa14.5□□□□□ -0.09
SAMM50-201ENST00000350028 PLXDC2Q6UX71 529 aa14.5□□□□□ -0.09
SAMM50-201ENST00000350028 CPEB3Q8NE35 698 aaKnown RBP14.5□□□□□ -0.09
SAMM50-201ENST00000350028 ST8SIA4Q92187 359 aa14.5□□□□□ -0.09
SAMM50-201ENST00000350028 MRGPRFQ96AM1 343 aa14.5□□□□□ -0.09
SAMM50-201ENST00000350028 DEFB127Q9H1M4 99 aa14.5□□□□□ -0.09
SAMM50-201ENST00000350028 CLEC4MQ9H2X3 399 aaPredicted RBP14.5□□□□□ -0.09
SAMM50-201ENST00000350028 ASCL3Q9NQ33 180 aa14.5□□□□□ -0.09
SAMM50-201ENST00000350028 SLC7A11Q9UPY5 501 aa14.5□□□□□ -0.09
SAMM50-201ENST00000350028 LIPGQ9Y5X9 500 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms