RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 OR8U8P0C7N1 319 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 SMIM15Q7Z3B0 74 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 WDR5BQ86VZ2 330 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 ZNF547Q8IVP9 402 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 OR4C3Q8NH37 302 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 TVP23CQ96ET8 276 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 NOL4LQ96MY1 436 aaPredicted RBP14.41□□□□□ -0.1
NPHP3-201ENST00000337331 CALHM2Q9HA72 323 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 CHST11Q9NPF2 352 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 C20orf141Q9NUB4 165 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 NXT1Q9UKK6 140 aaKnown RBP14.41□□□□□ -0.1
NPHP3-201ENST00000337331 PIGLQ9Y2B2 252 aa14.41□□□□□ -0.1
NPHP3-201ENST00000337331 SDCBPO00560 298 aaPredicted RBP14.4□□□□□ -0.1
NPHP3-201ENST00000337331 NRG2O14511 850 aaPredicted RBP14.4□□□□□ -0.1
NPHP3-201ENST00000337331 GUSBP08236 651 aa14.4□□□□□ -0.1
NPHP3-201ENST00000337331 TAF9Q16594 264 aa14.4□□□□□ -0.1
NPHP3-201ENST00000337331 TMEM217Q8N7C4 229 aa14.4□□□□□ -0.1
NPHP3-201ENST00000337331 SLC25A43Q8WUT9 341 aaPredicted RBP14.4□□□□□ -0.1
NPHP3-201ENST00000337331 ARHGDIGQ99819 225 aa14.4□□□□□ -0.1
NPHP3-201ENST00000337331 PARD6AQ9NPB6 346 aa14.4□□□□□ -0.1
NPHP3-201ENST00000337331 XKRY2A2RUG3 117 aa14.4□□□□□ -0.1
NPHP3-201ENST00000337331 PRSS37A4D1T9 235 aa14.4□□□□□ -0.1
NPHP3-201ENST00000337331 WNT11O96014 354 aa14.4□□□□□ -0.1
NPHP3-201ENST00000337331 SERPINA7P05543 415 aa14.4□□□□□ -0.1
NPHP3-201ENST00000337331 THSD4Q6ZMP0 1018 aa14.4□□□□□ -0.1
NPHP3-201ENST00000337331 MRGPRX3Q96LB0 322 aa14.4□□□□□ -0.1
NPHP3-201ENST00000337331 ABHD6Q9BV23 337 aa14.4□□□□□ -0.1
NPHP3-201ENST00000337331 WDR13Q9H1Z4 485 aa14.4□□□□□ -0.1
NPHP3-201ENST00000337331 PADI1Q9ULC6 663 aa14.4□□□□□ -0.1
NPHP3-201ENST00000337331 CXorf51AA0A1B0GTR3 108 aa14.4□□□□□ -0.1
NPHP3-201ENST00000337331 HOXC8P31273 242 aa14.4□□□□□ -0.1
NPHP3-201ENST00000337331 FAM53BQ14153 422 aa14.4□□□□□ -0.1
NPHP3-201ENST00000337331 VAMP3Q15836 100 aa14.4□□□□□ -0.1
NPHP3-201ENST00000337331 LTC4SQ16873 150 aa14.4□□□□□ -0.1
NPHP3-201ENST00000337331 CPEB2Q7Z5Q1 589 aaKnown RBP14.4□□□□□ -0.1
NPHP3-201ENST00000337331 BATF2Q8N1L9 274 aa14.4□□□□□ -0.1
NPHP3-201ENST00000337331 TMEM229BQ8NBD8 167 aa14.4□□□□□ -0.1
NPHP3-201ENST00000337331 C8orf44Q96CB5 159 aa14.4□□□□□ -0.1
NPHP3-201ENST00000337331 LANCL2Q9NS86 450 aa14.4□□□□□ -0.1
NPHP3-201ENST00000337331 XRCC2O43543 280 aa14.39□□□□□ -0.11
NPHP3-201ENST00000337331 SLC25A4P12235 298 aa14.39□□□□□ -0.11
NPHP3-201ENST00000337331 LPAR6P43657 344 aa14.39□□□□□ -0.11
NPHP3-201ENST00000337331 SLC17A1Q14916 467 aa14.39□□□□□ -0.11
NPHP3-201ENST00000337331 TOMM20LQ6UXN7 152 aa14.39□□□□□ -0.11
NPHP3-201ENST00000337331 C2orf50Q96LR7 162 aa14.39□□□□□ -0.11
NPHP3-201ENST00000337331 AP1S3Q96PC3 154 aa14.39□□□□□ -0.11
NPHP3-201ENST00000337331 B3GALT5Q9Y2C3 310 aa14.39□□□□□ -0.11
NPHP3-201ENST00000337331 ADAMTSL1Q8N6G6 1762 aa14.39□□□□□ -0.11
NPHP3-201ENST00000337331 OTOL1A6NHN0 477 aaPredicted RBP14.39□□□□□ -0.11
NPHP3-201ENST00000337331 MT-CO2P00403 227 aa14.39□□□□□ -0.11
NPHP3-201ENST00000337331 HOXA5P20719 270 aa14.39□□□□□ -0.11
NPHP3-201ENST00000337331 CAPZBP47756 277 aa14.39□□□□□ -0.11
NPHP3-201ENST00000337331 GRB2P62993 217 aaKnown RBP14.39□□□□□ -0.11
NPHP3-201ENST00000337331 MSMO1Q15800 293 aa14.39□□□□□ -0.11
NPHP3-201ENST00000337331 ANKRD16Q6P6B7 361 aa14.39□□□□□ -0.11
NPHP3-201ENST00000337331 FAM199XQ6PEV8 388 aaPredicted RBP14.39□□□□□ -0.11
NPHP3-201ENST00000337331 LINC00696Q6ZRV3 163 aa14.39□□□□□ -0.11
NPHP3-201ENST00000337331 BHLHE23Q8NDY6 225 aa14.39□□□□□ -0.11
NPHP3-201ENST00000337331 OR4C5Q8NGB2 326 aa14.39□□□□□ -0.11
NPHP3-201ENST00000337331 RAB24Q969Q5 203 aa14.39□□□□□ -0.11
NPHP3-201ENST00000337331 SLC5A6Q9Y289 635 aa14.39□□□□□ -0.11
NPHP3-201ENST00000337331 A0A1W2PPQ1 181 aa14.39□□□□□ -0.11
NPHP3-201ENST00000337331 CD81P60033 236 aa14.39□□□□□ -0.11
NPHP3-201ENST00000337331 DMRTC1Q5HYR2 192 aa14.39□□□□□ -0.11
NPHP3-201ENST00000337331 SLC25A38Q96DW6 304 aa14.39□□□□□ -0.11
NPHP3-201ENST00000337331 TBX19O60806 448 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 MLF1P58340 268 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 TMPRSS11FQ6ZWK6 438 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 DOK3Q7L591 496 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 GNG13Q9P2W3 67 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 FBXL17Q9UF56 701 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 AK3Q9UIJ7 227 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 UNC13CQ8NB66 2214 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 CTSVO60911 334 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 FOLR1P15328 257 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 CD96P40200 585 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 ASCL1P50553 236 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 EGR3Q06889 387 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 WDR88Q6ZMY6 472 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 TXNIPQ9H3M7 391 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 GPR84Q9NQS5 396 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 HSF4Q9ULV5 492 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 SIT1Q9Y3P8 196 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 H0YIG0 161 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 MSR1P21757 451 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 DCAF12Q5T6F0 453 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 NCR3LG1Q68D85 454 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 LGI3Q8N145 548 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 POMT1Q9Y6A1 747 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 CER1O95813 267 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 TCN2P20062 427 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 KHDC3LQ587J8 217 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 RABEPKQ7Z6M1 372 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 OR52N5Q8NH56 324 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 SEH1LQ96EE3 360 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 NRTNQ99748 197 aa14.38□□□□□ -0.11
NPHP3-201ENST00000337331 ZNF318Q5VUA4 2279 aa14.37□□□□□ -0.11
NPHP3-201ENST00000337331 PDLIM3Q53GG5 364 aaPredicted RBP14.37□□□□□ -0.11
NPHP3-201ENST00000337331 WDR34Q96EX3 536 aa14.37□□□□□ -0.11
NPHP3-201ENST00000337331 WSB1Q9Y6I7 421 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 1327 ms