RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 ZP4Q12836 540 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 EXOSC2Q13868 293 aaKnown RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 ZNF674Q2M3X9 581 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 MOGAT2Q3SYC2 334 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 C6orf132Q5T0Z8 1188 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 OR4A4PQ8NGN8 299 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 MS4A4AQ96JQ5 239 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 NCOR1P1Q9H4R4 102 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 MRPL42Q9Y6G3 142 aaKnown RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 A6NDN8 102 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 CADM3Q8N126 398 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 OR5AR1Q8NGP9 310 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 LGALS14Q8TCE9 139 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 FRZBQ92765 325 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 BCL2L2Q92843 193 aaPredicted RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 LSM10Q969L4 123 aaKnown RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 OR6C1Q96RD1 312 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 TNFSF18Q9UNG2 199 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 SIT1Q9Y3P8 196 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 IQCF5A8MTL0 148 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 CEBPZOSA8MTT3 80 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 TOR2AQ5JU69 321 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 CCSAPQ6IQ19 270 aaPredicted RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 OSR2Q8N2R0 312 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 RNF175Q8N4F7 328 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 OR2G2Q8NGZ5 317 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 FBXO34Q9NWN3 711 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 ICAM5Q9UMF0 924 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 NCBP2LA6PVI3 153 aaKnown RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 SHC1P29353 583 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 ADIRFQ15847 76 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 ALKBH2Q6NS38 261 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 ZNF740Q8NDX6 193 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 C1QTNF6Q9BXI9 259 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 FGF21Q9NSA1 209 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 C11orf98E9PRG8 122 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 M0QZ24 198 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 HSPB1P04792 205 aaKnown RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 ID4P47928 161 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 AKR1C1Q04828 323 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 Q3ZCU0 254 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 OR9Q2Q8NGE9 314 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 FAM234AQ9H0X4 552 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 IGFLR1Q9H665 355 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 CA5BQ9Y2D0 317 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 DIDO1Q9BTC0 2240 aaKnown RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 NXPH2O95156 264 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 TMEM196Q5HYL7 178 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 DOLPP1Q86YN1 238 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 ARHGDIGQ99819 225 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 PRR14Q9BWN1 585 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 MARCH4Q9P2E8 410 aaPredicted RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 LRRC3CA6NJW4 275 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 K7ERU9 68 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 UCP2P55851 309 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 LRRC75BQ2VPJ9 315 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 ACER2Q5QJU3 275 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 DNLZQ5SXM8 178 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 OR5M9Q8NGP3 310 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 OR5M1Q8NGP8 315 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 SAP30LQ9HAJ7 183 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 TIMM9Q9Y5J7 89 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 MEIKINA0A087WXM9 373 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 TMEM250H0YL14 139 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 TM4SF5O14894 197 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 GJA4P35212 333 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 HERVK_113P61574 105 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 OR2G3Q8NGZ4 309 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 ZNF845Q96IR2 970 aaPredicted RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 CD37P11049 281 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 SRD5A2P31213 254 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 ZNF718Q3SXZ3 478 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 ACSF3Q4G176 576 aaPredicted RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 TMEM97Q5BJF2 176 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 SFRP5Q5T4F7 317 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 ZDHHC23Q8IYP9 409 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 C1orf162Q8NEQ5 155 aaPredicted RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 SFT2D1Q8WV19 159 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 EID2BQ96D98 161 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 PHF7Q9BWX1 381 aaPredicted RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 MAGT1Q9H0U3 335 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 OPN1SWP03999 348 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 TYMSP04818 313 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 SLC37A1P57057 533 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 KRTCAP3Q53RY4 240 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 PQLC2Q6ZP29 291 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 ZNF429Q86V71 674 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 AQP10Q96PS8 301 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 KCNK7Q9Y2U2 307 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 AKR7A3O95154 331 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 ERVFC1P60507 584 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 PDZK1IP1Q13113 114 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 BTN1A1Q13410 526 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 ANKRD55Q3KP44 614 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 OR4F15Q8NGB8 312 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 OR5A2Q8NGI9 324 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 ZNF596Q8TC21 504 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 C20orf27Q9GZN8 174 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 265.6 ms