RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 A8MVM7 634 aa12.96□□□□□ -0.33
COL6A2-201ENST00000300527 ANOS1P23352 680 aa12.96□□□□□ -0.33
COL6A2-201ENST00000300527 CHATP28329 748 aa12.96□□□□□ -0.33
COL6A2-201ENST00000300527 AADACL3Q5VUY0 350 aa12.96□□□□□ -0.33
COL6A2-201ENST00000300527 OPN5Q6U736 354 aa12.96□□□□□ -0.33
COL6A2-201ENST00000300527 MEX3BQ6ZN04 569 aaKnown RBP12.96□□□□□ -0.33
COL6A2-201ENST00000300527 C1QL2Q7Z5L3 287 aa12.96□□□□□ -0.33
COL6A2-201ENST00000300527 PIGTQ969N2 578 aa12.96□□□□□ -0.33
COL6A2-201ENST00000300527 GPR61Q9BZJ8 451 aa12.96□□□□□ -0.33
COL6A2-201ENST00000300527 EGLN1Q9GZT9 426 aa12.96□□□□□ -0.33
COL6A2-201ENST00000300527 ADAM19Q9H013 955 aa12.96□□□□□ -0.33
COL6A2-201ENST00000300527 OR10A2Q9H208 303 aa12.96□□□□□ -0.33
COL6A2-201ENST00000300527 GFOD1Q9NXC2 390 aa12.96□□□□□ -0.33
COL6A2-201ENST00000300527 NXT1Q9UKK6 140 aaKnown RBP12.96□□□□□ -0.33
COL6A2-201ENST00000300527 A6NCN8 305 aa12.96□□□□□ -0.34
COL6A2-201ENST00000300527 ZNF729A6NN14 1252 aaPredicted RBP12.96□□□□□ -0.34
COL6A2-201ENST00000300527 FAM157AC9JC47 383 aa12.96□□□□□ -0.34
COL6A2-201ENST00000300527 CHRM2P08172 466 aa12.96□□□□□ -0.34
COL6A2-201ENST00000300527 TBPP20226 339 aa12.96□□□□□ -0.34
COL6A2-201ENST00000300527 CFPP27918 469 aa12.96□□□□□ -0.34
COL6A2-201ENST00000300527 SLC37A1P57057 533 aa12.96□□□□□ -0.34
COL6A2-201ENST00000300527 UBE2KP61086 200 aa12.96□□□□□ -0.34
COL6A2-201ENST00000300527 RPS23P62266 143 aaKnown RBP12.96□□□□□ -0.34
COL6A2-201ENST00000300527 ABCA11PQ4W5N1 156 aa12.96□□□□□ -0.34
COL6A2-201ENST00000300527 OGFOD3Q6PK18 319 aa12.96□□□□□ -0.34
COL6A2-201ENST00000300527 C6orf201Q7Z4U5 140 aa12.96□□□□□ -0.34
COL6A2-201ENST00000300527 OR2AJ1Q8NGZ0 328 aa12.96□□□□□ -0.34
COL6A2-201ENST00000300527 PTPMT1Q8WUK0 201 aaPredicted RBP12.96□□□□□ -0.34
COL6A2-201ENST00000300527 MARS2Q96GW9 593 aaKnown RBP12.96□□□□□ -0.34
COL6A2-201ENST00000300527 CLDN16Q9Y5I7 305 aa12.96□□□□□ -0.34
COL6A2-201ENST00000300527 IGKV1D-8A0A087WSZ0 117 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 IGHV3-20A0A0C4DH32 117 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 STMND1H3BQB6 276 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 TMEM225BP0DP42 221 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 FOSL1P15407 271 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 HNRNPA2B1P22626 353 aaKnown RBP12.95□□□□□ -0.34
COL6A2-201ENST00000300527 NTSR1P30989 418 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 SLC6A8P48029 635 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 RRADP55042 308 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 QRFPP83859 136 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 SPNS3Q6ZMD2 512 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 BATF2Q8N1L9 274 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 UBAC2Q8NBM4 344 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 OR5L1Q8NGL2 311 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 PTX4Q96A99 478 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 OR5B2Q96R09 309 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 ABHD14AQ9BUJ0 271 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 SLC35B3Q9H1N7 401 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 PARPBPQ9NWS1 579 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 NOSIPQ9Y314 301 aaKnown RBP12.95□□□□□ -0.34
COL6A2-201ENST00000300527 LOC390937A0A1W2PQ73 354 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 ZNF850A8MQ14 1090 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 TMEM14DPA8MWL7 114 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 QDPRP09417 244 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 FABP4P15090 132 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 GABRA4P48169 554 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 POLR2HP52434 150 aaKnown RBP12.95□□□□□ -0.34
COL6A2-201ENST00000300527 FOXK1P85037 733 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 C1orf189Q5VU69 101 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 C20orf196Q8IYI0 205 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 SCARF2Q96GP6 870 aaPredicted RBP12.95□□□□□ -0.34
COL6A2-201ENST00000300527 PBDC1Q9BVG4 233 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 WFDC1Q9HC57 220 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 DMRT1Q9Y5R6 373 aa12.95□□□□□ -0.34
COL6A2-201ENST00000300527 H0YL77 283 aa12.94□□□□□ -0.34
COL6A2-201ENST00000300527 CYB5BO43169 146 aa12.94□□□□□ -0.34
COL6A2-201ENST00000300527 TNFP01375 233 aa12.94□□□□□ -0.34
COL6A2-201ENST00000300527 SLC35A1P78382 337 aa12.94□□□□□ -0.34
COL6A2-201ENST00000300527 UFSP2Q9NUQ7 469 aa12.94□□□□□ -0.34
COL6A2-201ENST00000300527 PHF3Q92576 2039 aaKnown RBP12.94□□□□□ -0.34
COL6A2-201ENST00000300527 ADAM10O14672 748 aa12.94□□□□□ -0.34
COL6A2-201ENST00000300527 RER1O15258 196 aa12.94□□□□□ -0.34
COL6A2-201ENST00000300527 HTR5AP47898 357 aa12.94□□□□□ -0.34
COL6A2-201ENST00000300527 ZNF121P58317 390 aaPredicted RBP12.94□□□□□ -0.34
COL6A2-201ENST00000300527 TMEM156Q8N614 296 aa12.94□□□□□ -0.34
COL6A2-201ENST00000300527 FAM206AQ9NX38 181 aa12.94□□□□□ -0.34
COL6A2-201ENST00000300527 PPIHO43447 177 aaKnown RBP12.94□□□□□ -0.34
COL6A2-201ENST00000300527 SLC34A2O95436 690 aa12.94□□□□□ -0.34
COL6A2-201ENST00000300527 GSTP1P09211 210 aaKnown RBP12.94□□□□□ -0.34
COL6A2-201ENST00000300527 NOVA1P51513 510 aaKnown RBP12.94□□□□□ -0.34
COL6A2-201ENST00000300527 CCL20P78556 96 aa12.94□□□□□ -0.34
COL6A2-201ENST00000300527 GAMTQ14353 236 aa12.94□□□□□ -0.34
COL6A2-201ENST00000300527 NSDHLQ15738 373 aa12.94□□□□□ -0.34
COL6A2-201ENST00000300527 UNQ6494/PRO21346Q6UXR6 183 aa12.94□□□□□ -0.34
COL6A2-201ENST00000300527 LYZL2Q7Z4W2 148 aa12.94□□□□□ -0.34
COL6A2-201ENST00000300527 CCDC54Q8NEL0 328 aa12.94□□□□□ -0.34
COL6A2-201ENST00000300527 TOX2Q96NM4 488 aa12.94□□□□□ -0.34
COL6A2-201ENST00000300527 CCNL2Q96S94 520 aaPredicted RBP12.94□□□□□ -0.34
COL6A2-201ENST00000300527 DUSP15Q9H1R2 295 aaPredicted RBP12.94□□□□□ -0.34
COL6A2-201ENST00000300527 F5H5K5 113 aa12.93□□□□□ -0.34
COL6A2-201ENST00000300527 SRSF10O75494 262 aaKnown RBP12.93□□□□□ -0.34
COL6A2-201ENST00000300527 MT-ATP6P00846 226 aa12.93□□□□□ -0.34
COL6A2-201ENST00000300527 GFERP55789 205 aa12.93□□□□□ -0.34
COL6A2-201ENST00000300527 NKX6-1P78426 367 aaPredicted RBP12.93□□□□□ -0.34
COL6A2-201ENST00000300527 SURF2Q15527 256 aaPredicted RBP12.93□□□□□ -0.34
COL6A2-201ENST00000300527 VAX1Q5SQQ9 334 aa12.93□□□□□ -0.34
COL6A2-201ENST00000300527 DYRK2Q92630 601 aa12.93□□□□□ -0.34
COL6A2-201ENST00000300527 EMG1Q92979 244 aaKnown RBP12.93□□□□□ -0.34
COL6A2-201ENST00000300527 PLEKHJ1Q9NW61 149 aa12.93□□□□□ -0.34
COL6A2-201ENST00000300527 TGIF2-C20orf24A0A0A6YYL0 155 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms