RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 CMTM3Q96MX0 182 aa10.36□□□□□ -0.75
LAMA4-201ENST00000230538 IL21Q9HBE4 155 aa10.36□□□□□ -0.75
LAMA4-201ENST00000230538 CST7O76096 145 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 ONECUT2O95948 504 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 SDHBP21912 280 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 FPR2P25090 351 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 Q56UQ5 140 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 OR2T2Q6IF00 324 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 CALHM3Q86XJ0 350 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 OCIAD1Q9NX40 245 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 TUBAL3A6NHL2 446 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 POU2F2P09086 479 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 NME1P15531 152 aaKnown RBP10.35□□□□□ -0.75
LAMA4-201ENST00000230538 Q1RN00 199 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 TMEM88Q6PEY1 159 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 C11orf42Q8N5U0 333 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 SPSB1Q96BD6 273 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 LSM2Q9Y333 95 aaKnown RBP10.35□□□□□ -0.75
LAMA4-201ENST00000230538 BCORQ6W2J9 1755 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 CEACAM6P40199 344 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 GNG3P63215 75 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 ZNF117Q03924 483 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 INSL4Q14641 139 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 ZNF574Q6ZN55 896 aaPredicted RBP10.35□□□□□ -0.75
LAMA4-201ENST00000230538 AAMDCQ9H7C9 122 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 RHOFQ9HBH0 211 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 DUS4LO95620 317 aaKnown RBP10.35□□□□□ -0.75
LAMA4-201ENST00000230538 S100A8P05109 93 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 S100A4P26447 101 aaKnown RBP10.35□□□□□ -0.75
LAMA4-201ENST00000230538 LIMK1P53667 647 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 PPP1CBP62140 327 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 GLDNQ6ZMI3 551 aaPredicted RBP10.35□□□□□ -0.75
LAMA4-201ENST00000230538 ZNF561Q8N587 486 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 MYOZ1Q9NP98 299 aaPredicted RBP10.35□□□□□ -0.75
LAMA4-201ENST00000230538 SIRT5Q9NXA8 310 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 FZR1Q9UM11 496 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 RNF24Q9Y225 148 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 EVPLQ92817 2033 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 A0A0B4J2E0 115 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 A0A1B0GX12 115 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 TPPP2P59282 170 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 ARRDC1Q8N5I2 433 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 OR2M7Q8NG81 312 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 C12orf10Q9HB07 376 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 TBX21Q9UL17 535 aa10.35□□□□□ -0.75
LAMA4-201ENST00000230538 TMEM272A0A1B0GTI8 110 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 SLC25A1P53007 311 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 PDCD1Q15116 288 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 Q6ZS52 159 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.34□□□□□ -0.75
LAMA4-201ENST00000230538 MISP3Q96FF7 219 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 PLPPR2Q96GM1 343 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 PRDM7Q9NQW5 492 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 CROCCQ5TZA2 2017 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 LRP5O75197 1615 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 GOSR1O95249 250 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 KRASP01116 189 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 SFTA3P0C7M3 94 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 BMI1P35226 326 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 RNPS1Q15287 305 aaKnown RBP10.34□□□□□ -0.75
LAMA4-201ENST00000230538 OR2W3Q7Z3T1 314 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 TCTE3Q8IZS6 198 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 TMEM56Q96MV1 263 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 FXYD1O00168 92 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 AVPR2P30518 371 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 HOXC8P31273 242 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 VAMP3Q15836 100 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 TCTN1Q2MV58 587 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 TP53I13Q8NBR0 393 aaPredicted RBP10.34□□□□□ -0.75
LAMA4-201ENST00000230538 DOK1Q99704 481 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 TAAR3PQ9P1P4 343 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 LOC102723971A0A1B0GUV8 181 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 KCNJ3P48549 501 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 AMTP48728 403 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 ZNF83P51522 516 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 MICBQ29980 383 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 SLC36A1Q7Z2H8 476 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 BTLAQ7Z6A9 289 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 VPS25Q9BRG1 176 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 UCK1Q9HA47 277 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 ZNF230Q9UIE0 474 aaPredicted RBP10.34□□□□□ -0.75
LAMA4-201ENST00000230538 SP6Q3SY56 376 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 FA2HQ7L5A8 372 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 NARFLQ9H6Q4 476 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 MMP25Q9NPA2 562 aa10.34□□□□□ -0.75
LAMA4-201ENST00000230538 TMEFF2Q9UIK5 374 aaPredicted RBP10.34□□□□□ -0.75
LAMA4-201ENST00000230538 KLK10O43240 276 aa10.33□□□□□ -0.76
LAMA4-201ENST00000230538 TOX4O94842 621 aa10.33□□□□□ -0.76
LAMA4-201ENST00000230538 MEOX1P50221 254 aa10.33□□□□□ -0.76
LAMA4-201ENST00000230538 PLA1AQ53H76 456 aa10.33□□□□□ -0.76
LAMA4-201ENST00000230538 WDR38Q5JTN6 314 aa10.33□□□□□ -0.76
LAMA4-201ENST00000230538 FFAR4Q5NUL3 377 aa10.33□□□□□ -0.76
LAMA4-201ENST00000230538 TEX261Q6UWH6 196 aa10.33□□□□□ -0.76
LAMA4-201ENST00000230538 SLC16A12Q6ZSM3 486 aa10.33□□□□□ -0.76
LAMA4-201ENST00000230538 ZNF429Q86V71 674 aa10.33□□□□□ -0.76
LAMA4-201ENST00000230538 BCL2L2Q92843 193 aaPredicted RBP10.33□□□□□ -0.76
LAMA4-201ENST00000230538 U3KQ87 197 aa10.33□□□□□ -0.76
LAMA4-201ENST00000230538 NGFP01138 241 aa10.33□□□□□ -0.76
LAMA4-201ENST00000230538 OPRK1P41145 380 aa10.33□□□□□ -0.76
LAMA4-201ENST00000230538 MNX1P50219 401 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms