RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 SynprQ8BGN8 265 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Tnfsfm13Q8BXS2 410 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Slc38a1Q8K2P7 485 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Slc6a8Q8VBW1 640 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Olfr1100Q8VFM1 321 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Olfr1048Q8VGS2 320 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Defb6Q91VD6 63 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 MrgprdQ91ZB8 321 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Copz2Q9JHH9 205 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Gm21981D3Z6Q6 369 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Gosr2O35166 212 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 RradO88667 308 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Wipf3P0C7L0 485 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Ube2fbQ3UWQ3 185 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Zfp790Q80ZX2 779 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Stfa2l1Q8BWM3 103 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Slc1a7Q8JZR4 559 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Tor2aQ8R1J9 321 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Olfr1254Q8VFB1 314 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Raf1Q99N57 648 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Mrpl15Q9CPR5 295 aaKnown RBP13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Tm7sf3Q9CRG1 565 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Cmss1Q9CZT6 276 aaKnown RBP13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 1700034E13RikQ9D2T6 108 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 OxsmQ9D404 459 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Adamdec1Q9R0X2 467 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Olfr485A0A140LJF5 317 aa13.04□□□□□ -0.32
Nup88-202ENSMUST00000108530 Gm20219A0A1B0GRQ3 87 aa13.04□□□□□ -0.32
Nup88-202ENSMUST00000108530 Vmn1r68E9Q0V3 319 aa13.04□□□□□ -0.32
Nup88-202ENSMUST00000108530 Vmn1r7E9Q8T0 311 aa13.04□□□□□ -0.32
Nup88-202ENSMUST00000108530 D430019H16RikJ3QPM6 83 aa13.04□□□□□ -0.32
Nup88-202ENSMUST00000108530 DhfrP00375 187 aa13.04□□□□□ -0.32
Nup88-202ENSMUST00000108530 Zfp2P08043 459 aa13.04□□□□□ -0.32
Nup88-202ENSMUST00000108530 Il7rP16872 459 aa13.04□□□□□ -0.32
Nup88-202ENSMUST00000108530 Vipr2P41588 437 aa13.04□□□□□ -0.32
Nup88-202ENSMUST00000108530 Olfr1428Q0VDY1 314 aa13.04□□□□□ -0.32
Nup88-202ENSMUST00000108530 Arhgap9Q1HDU4 648 aa13.04□□□□□ -0.32
Nup88-202ENSMUST00000108530 Rnf224Q3UIW8 156 aa13.04□□□□□ -0.32
Nup88-202ENSMUST00000108530 Klk1b21Q61759 261 aa13.04□□□□□ -0.32
Nup88-202ENSMUST00000108530 Mfsd6lQ8R3N2 586 aa13.04□□□□□ -0.32
Nup88-202ENSMUST00000108530 Olfr1447Q8VFX3 309 aa13.04□□□□□ -0.32
Nup88-202ENSMUST00000108530 Vmn1r51Q8VIC6 319 aa13.04□□□□□ -0.32
Nup88-202ENSMUST00000108530 TsfmQ9CZR8 324 aa13.04□□□□□ -0.32
Nup88-202ENSMUST00000108530 Nova1Q9JKN6 507 aaKnown RBP13.04□□□□□ -0.32
Nup88-202ENSMUST00000108530 Htr6Q9R1C8 440 aa13.04□□□□□ -0.32
Nup88-202ENSMUST00000108530 Mmp16Q9WTR0 607 aa13.04□□□□□ -0.32
Nup88-202ENSMUST00000108530 Dmxl2Q8BPN8 3032 aa13.04□□□□□ -0.32
Nup88-202ENSMUST00000108530 Zfp141G3UY09 685 aa13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 Rln1P47932 185 aa13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 Snrpd2P62317 118 aaKnown RBP13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 Map2k6P70236 334 aaKnown RBP13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 PilraQ2YFS3 302 aa13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 Adam20Q7M763 760 aa13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 Olfr1101Q7TR59 310 aa13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 Olfr524Q7TRU0 318 aa13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 Prrg4Q8BGN6 226 aa13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 Cggbp1Q8BHG9 167 aaKnown RBP13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 Chrdl2Q8VEA6 426 aa13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 Olfr969Q8VG89 311 aa13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 Olfr131Q8VGC8 314 aa13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 Adarb1Q91ZS8 711 aaKnown RBP13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 GnmtQ9QXF8 293 aa13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 Gm3543D3Z235 184 aa13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 S1pr1O08530 382 aa13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 CebpbP28033 296 aa13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 RpiaP47968 303 aa13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 Fam57bQ7TNV1 275 aa13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 GnalQ8CGK7 381 aa13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 Rasgef1bQ8JZL7 473 aa13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 Olfr780Q8VEU0 312 aa13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 Olfr186Q8VEX5 309 aa13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 Olfr1504Q8VFQ4 315 aa13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 Itfg2Q91WI7 443 aa13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 Rpl14Q9CR57 217 aaKnown RBP13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 Lhx2Q9Z0S2 406 aa13.03□□□□□ -0.32
Nup88-202ENSMUST00000108530 Slc25a25A2ASZ8 469 aa13.02□□□□□ -0.32
Nup88-202ENSMUST00000108530 Xlr4aA2BI40 215 aa13.02□□□□□ -0.32
Nup88-202ENSMUST00000108530 Stpg3A2RSX4 306 aa13.02□□□□□ -0.32
Nup88-202ENSMUST00000108530 MsmpB1AWI6 139 aa13.02□□□□□ -0.32
Nup88-202ENSMUST00000108530 Gm20834J3QM72 227 aa13.02□□□□□ -0.32
Nup88-202ENSMUST00000108530 Gm2035J3QP87 144 aa13.02□□□□□ -0.32
Nup88-202ENSMUST00000108530 Ccl20O89093 97 aa13.02□□□□□ -0.32
Nup88-202ENSMUST00000108530 HckP08103 524 aa13.02□□□□□ -0.32
Nup88-202ENSMUST00000108530 Bmi1P25916 324 aa13.02□□□□□ -0.32
Nup88-202ENSMUST00000108530 Fam219bQ14DQ1 197 aa13.02□□□□□ -0.32
Nup88-202ENSMUST00000108530 Spc25Q3UA16 226 aa13.02□□□□□ -0.32
Nup88-202ENSMUST00000108530 Zfp974Q3UVF6 752 aa13.02□□□□□ -0.32
Nup88-202ENSMUST00000108530 Gm10912Q3UXH0 145 aa13.02□□□□□ -0.32
Nup88-202ENSMUST00000108530 Yipf6Q8BR70 236 aa13.02□□□□□ -0.32
Nup88-202ENSMUST00000108530 Lrtm1Q8BXQ3 356 aa13.02□□□□□ -0.32
Nup88-202ENSMUST00000108530 Rnf121Q8R1Z9 327 aa13.02□□□□□ -0.32
Nup88-202ENSMUST00000108530 Or51e2Q8VBV9 320 aa13.02□□□□□ -0.32
Nup88-202ENSMUST00000108530 Olfr434Q8VF17 321 aa13.02□□□□□ -0.32
Nup88-202ENSMUST00000108530 Chmp1b2Q9CQD4 199 aa13.02□□□□□ -0.32
Nup88-202ENSMUST00000108530 Reg4Q9D8G5 157 aa13.02□□□□□ -0.32
Nup88-202ENSMUST00000108530 AspdhQ9DCQ2 287 aa13.02□□□□□ -0.32
Nup88-202ENSMUST00000108530 P2ry14Q9ESG6 338 aa13.02□□□□□ -0.32
Nup88-202ENSMUST00000108530 Mlf1Q9QWV4 267 aa13.02□□□□□ -0.32
Nup88-202ENSMUST00000108530 Bpnt1Q9Z0S1 308 aa13.02□□□□□ -0.32
Nup88-202ENSMUST00000108530 Trav8n-2A0A075B633 112 aa13.02□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 58.6 ms