RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.43□□□□□ -1.06
PHGDH-215ENST00000641371 IL36GQ9NZH8 169 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 MTFP1Q9UDX5 166 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 ZNF629Q9UEG4 869 aaPredicted RBP8.43□□□□□ -1.06
PHGDH-215ENST00000641371 MPC1Q9Y5U8 109 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 NUBP2Q9Y5Y2 271 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 FREM2Q5SZK8 3169 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 INTS1Q8N201 2190 aaKnown RBP8.42□□□□□ -1.06
PHGDH-215ENST00000641371 TRAV18A0A075B6X5 111 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 IGKV1-9A0A0C4DH69 117 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 ANKRD20A5PA0PJZ0 165 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 OR5H1A6NKK0 313 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 OR5B21A6NL26 309 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 ANKRD30BLA7E2S9 258 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 E9PLN8 166 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 AKR7A2O43488 359 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 RAD51DO75771 328 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 CYB5AP00167 134 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 DHFRP00374 187 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 VSIG8P0DPA2 414 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 EDN3P14138 238 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 PSMB1P20618 241 aaKnown RBP8.42□□□□□ -1.06
PHGDH-215ENST00000641371 CCNOP22674 350 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 IL32P24001 234 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 SLC6A1P30531 599 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 RCVRNP35243 200 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 RAD52P43351 418 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 RFX2P48378 723 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 CASP6P55212 293 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 MTCP1P56278 107 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 CXADRP78310 365 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 DGCR2P98153 550 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 HGFACQ04756 655 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 KLRB1Q12918 225 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 KLF9Q13886 244 aaPredicted RBP8.42□□□□□ -1.06
PHGDH-215ENST00000641371 ZMYND11Q15326 602 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 UBE2V2Q15819 145 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 HIKESHIQ53FT3 197 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 TIMM23BQ5SRD1 257 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 OLFML2AQ68BL7 652 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 GFRALQ6UXV0 394 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 FBXW12Q6X9E4 464 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 BHLHA15Q7RTS1 189 aaPredicted RBP8.42□□□□□ -1.06
PHGDH-215ENST00000641371 ZDHHC23Q8IYP9 409 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 OR52I2Q8NH67 350 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 UBASH3BQ8TF42 649 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 TNFAIP8L1Q8WVP5 186 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 ZNF75AQ96N20 296 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 MARVELD1Q9BSK0 173 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 TM2D1Q9BX74 207 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 BCL2L14Q9BZR8 327 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 AUNIPQ9H7T9 357 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 ZNF71Q9NQZ8 489 aaPredicted RBP8.42□□□□□ -1.06
PHGDH-215ENST00000641371 ZNF835Q9Y2P0 537 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 RAXQ9Y2V3 346 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 PTPRQQ9UMZ3 2332 aa8.42□□□□□ -1.06
PHGDH-215ENST00000641371 SPTBN2O15020 2390 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 SVILO95425 2214 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 hCG_2014768A0A024R1R8 64 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 SERPINE3A8MV23 424 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 CDC14BO60729 498 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 LYZL6O75951 148 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 CSTBP04080 98 aaKnown RBP8.41□□□□□ -1.06
PHGDH-215ENST00000641371 CD3GP09693 182 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 AKAIN1P0CW23 69 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 RAC2P15153 192 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 ACKR3P25106 362 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 FOXG1P55316 489 aaPredicted RBP8.41□□□□□ -1.06
PHGDH-215ENST00000641371 TAS2R19P59542 299 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 MZT1Q08AG7 82 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 GK2Q14410 553 aaPredicted RBP8.41□□□□□ -1.06
PHGDH-215ENST00000641371 MEF2DQ14814 521 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 CEACAM21Q3KPI0 293 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 ACTBL2Q562R1 376 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 PLCXD3Q63HM9 321 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 VWA1Q6PCB0 445 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 PLXDC2Q6UX71 529 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 ASCL4Q6XD76 172 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 MRGPRGQ86SM5 289 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 ZNF554Q86TJ5 538 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 ZNF584Q8IVC4 421 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 FAM89BQ8N5H3 189 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 Q8NA96 180 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 TMEM229BQ8NBD8 167 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 OR5A2Q8NGI9 324 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 OR10R2Q8NGX6 335 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 OR2AE1Q8NHA4 323 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 GPX8Q8TED1 209 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 AQP3Q92482 292 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 ELOVL5Q9NYP7 299 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 MRPL15Q9P015 296 aaKnown RBP8.41□□□□□ -1.06
PHGDH-215ENST00000641371 SPEF1Q9Y4P9 236 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 FAM215AQ9Y5M1 114 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 RTTNQ86VV8 2226 aa8.41□□□□□ -1.06
PHGDH-215ENST00000641371 LINC00854A0A1B0GVQ3 168 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 FAM90A10PA6NDY2 464 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 FAM90A18PA6NE21 464 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 FAM90A16PA6NEW6 464 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 FAM90A20PA6NIJ5 464 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 A6NIN4 97 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 343.5 ms