RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 IGKV1-27A0A075B6S5 117 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 IGKV3D-15A0A087WSY6 115 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 ANKRD20A5PA0PJZ0 165 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 OR6C6A6NF89 314 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 HMX3A6NHT5 357 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 H7C417 338 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 PYCARD-AS1I3L0S3 204 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 MTRF1O75570 445 aaKnown RBP2.98□□□□□ -1.93
LIG4-205ENST00000614526 DHFRP00374 187 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 NRASP01111 189 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 AMY2AP04746 511 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 SELEP16581 610 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 PSMB1P20618 241 aaKnown RBP2.98□□□□□ -1.93
LIG4-205ENST00000614526 DUSP1P28562 367 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 BLVRBP30043 206 aaPredicted RBP2.98□□□□□ -1.93
LIG4-205ENST00000614526 OTX1P32242 354 aaPredicted RBP2.98□□□□□ -1.93
LIG4-205ENST00000614526 PTGFRP43088 359 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 PCBD1P61457 104 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 ERVS71-1P61550 626 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 FAM3AP98173 230 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 NHLH1Q02575 133 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 PLP2Q04941 152 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 RIPPLY1Q0D2K3 151 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 ARFRP1Q13795 201 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 ZNF169Q14929 603 aaPredicted RBP2.98□□□□□ -1.93
LIG4-205ENST00000614526 RTP5Q14D33 572 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 RNPS1Q15287 305 aaKnown RBP2.98□□□□□ -1.93
LIG4-205ENST00000614526 ST3GAL2Q16842 350 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 ZFP69Q49AA0 526 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 PLAC9Q5JTB6 97 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 FBXW9Q5XUX1 488 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 PLCXD3Q63HM9 321 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 PGAP1Q75T13 922 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 RHOUQ7L0Q8 258 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 TRAPPC6BQ86SZ2 158 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 MDP1Q86V88 176 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 LYPD6Q86Y78 171 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 CISD2Q8N5K1 135 aaKnown RBP2.98□□□□□ -1.93
LIG4-205ENST00000614526 NKAIN3Q8N8D7 197 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 PNLDC1Q8NA58 520 aaKnown RBP2.98□□□□□ -1.93
LIG4-205ENST00000614526 OR56B2PQ8NGI1 322 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 OR52H1Q8NGJ2 320 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 WDR89Q96FK6 387 aaPredicted RBP2.98□□□□□ -1.93
LIG4-205ENST00000614526 ABHD17AQ96GS6 310 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 PRRX2Q99811 253 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 GINS4Q9BRT9 223 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 HDHD3Q9BSH5 251 aaPredicted RBP2.98□□□□□ -1.93
LIG4-205ENST00000614526 TMEM59Q9BXS4 323 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 LPAR5Q9H1C0 372 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 C20orf85Q9H1P6 137 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 OPN3Q9H1Y3 402 aaPredicted RBP2.98□□□□□ -1.93
LIG4-205ENST00000614526 MED28Q9H204 178 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 BCO1Q9HAY6 547 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 MTFP1Q9UDX5 166 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 RAB22AQ9UL26 194 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 PIEZO1Q92508 2521 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 BSNQ9UPA5 3926 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 SDCBPO00560 298 aaPredicted RBP2.98□□□□□ -1.93
LIG4-205ENST00000614526 HSPB6O14558 160 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 GSTZ1O43708 216 aaPredicted RBP2.98□□□□□ -1.93
LIG4-205ENST00000614526 CDC14BO60729 498 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 SIX6O95475 246 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 RAB3DO95716 219 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 CYB5AP00167 134 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 PMP2P02689 132 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 ERCC1P07992 297 aaPredicted RBP2.98□□□□□ -1.93
LIG4-205ENST00000614526 CPN1P15169 458 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 MGMTP16455 207 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 CTSSP25774 331 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 TMEM50BP56557 158 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 HOXA4Q00056 320 aaPredicted RBP2.98□□□□□ -1.93
LIG4-205ENST00000614526 ECH1Q13011 328 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 GK2Q14410 553 aaPredicted RBP2.98□□□□□ -1.93
LIG4-205ENST00000614526 OR2T2Q6IF00 324 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 STEAP1BQ6NZ63 245 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 CRIP3Q6Q6R5 217 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 BAIAP2L2Q6UXY1 529 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 C6orf201Q7Z4U5 140 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 C5orf24Q7Z6I8 188 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 ZNF584Q8IVC4 421 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 TMEM45BQ96B21 275 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 FOXRED1Q96CU9 486 aaPredicted RBP2.98□□□□□ -1.93
LIG4-205ENST00000614526 BORCS8Q96FH0 119 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 ZC3HAV1LQ96H79 300 aaKnown RBP2.98□□□□□ -1.93
LIG4-205ENST00000614526 MRI1Q9BV20 369 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 ZNF69Q9UC07 566 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 KCNK7Q9Y2U2 307 aa2.98□□□□□ -1.93
LIG4-205ENST00000614526 A0A0U1RQV5 110 aa2.97□□□□□ -1.93
LIG4-205ENST00000614526 LOC390937A0A1W2PQ73 354 aa2.97□□□□□ -1.93
LIG4-205ENST00000614526 LDLRAD4O15165 306 aa2.97□□□□□ -1.93
LIG4-205ENST00000614526 CTDSPLO15194 276 aa2.97□□□□□ -1.93
LIG4-205ENST00000614526 TSC22D2O75157 780 aa2.97□□□□□ -1.93
LIG4-205ENST00000614526 APOC1P02654 83 aa2.97□□□□□ -1.93
LIG4-205ENST00000614526 CSTBP04080 98 aaKnown RBP2.97□□□□□ -1.93
LIG4-205ENST00000614526 FAM87AP0C7U9 286 aa2.97□□□□□ -1.93
LIG4-205ENST00000614526 GSTT2BP0CG30 244 aa2.97□□□□□ -1.93
LIG4-205ENST00000614526 GABRA1P14867 456 aa2.97□□□□□ -1.93
LIG4-205ENST00000614526 PI3P19957 117 aa2.97□□□□□ -1.93
LIG4-205ENST00000614526 IGHV1-2P23083 117 aa2.97□□□□□ -1.93
LIG4-205ENST00000614526 APLNRP35414 380 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms