RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 SGCDQ92629 289 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 DVL3Q92997 716 aaPredicted RBP11.21□□□□□ -0.61
CTSA-213ENST00000606782 MRPL48Q96GC5 212 aaKnown RBP11.21□□□□□ -0.61
CTSA-213ENST00000606782 OR2V2Q96R30 315 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 JMJD8Q96S16 334 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 SLC30A2Q9BRI3 323 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 ALG8Q9BVK2 526 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 CDCA4Q9BXL8 241 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 TTTY10Q9BZA0 68 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 SP140LQ9H930 580 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 ERVK-18Q9QC07 812 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 CLEC2DQ9UHP7 191 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 IKZF2Q9UKS7 526 aa11.21□□□□□ -0.61
CTSA-213ENST00000606782 CAB39Q9Y376 341 aaPredicted RBP11.21□□□□□ -0.61
CTSA-213ENST00000606782 TRAPPC2LH3BP13 241 aa11.2□□□□□ -0.62
CTSA-213ENST00000606782 ZNF12P17014 697 aa11.2□□□□□ -0.62
CTSA-213ENST00000606782 MDH2P40926 338 aaKnown RBP11.2□□□□□ -0.62
CTSA-213ENST00000606782 GATA4P43694 442 aa11.2□□□□□ -0.62
CTSA-213ENST00000606782 CX3CR1P49238 355 aa11.2□□□□□ -0.62
CTSA-213ENST00000606782 ZNF121P58317 390 aaPredicted RBP11.2□□□□□ -0.62
CTSA-213ENST00000606782 ACTA2P62736 377 aa11.2□□□□□ -0.62
CTSA-213ENST00000606782 ACTG2P63267 376 aa11.2□□□□□ -0.62
CTSA-213ENST00000606782 HNRNPA0Q13151 305 aaKnown RBP11.2□□□□□ -0.62
CTSA-213ENST00000606782 IRF3Q14653 427 aa11.2□□□□□ -0.62
CTSA-213ENST00000606782 MUC20Q8N307 709 aaPredicted RBP11.2□□□□□ -0.62
CTSA-213ENST00000606782 NANOGP1Q8N7R0 232 aa11.2□□□□□ -0.62
CTSA-213ENST00000606782 YIPF7Q8N8F6 280 aa11.2□□□□□ -0.62
CTSA-213ENST00000606782 ZNF485Q8NCK3 441 aa11.2□□□□□ -0.62
CTSA-213ENST00000606782 MEGF10Q96KG7 1140 aa11.2□□□□□ -0.62
CTSA-213ENST00000606782 SUCNR1Q9BXA5 334 aa11.2□□□□□ -0.62
CTSA-213ENST00000606782 ISG20L2Q9H9L3 353 aaKnown RBP11.2□□□□□ -0.62
CTSA-213ENST00000606782 MMP26Q9NRE1 261 aa11.2□□□□□ -0.62
CTSA-213ENST00000606782 FAM206AQ9NX38 181 aa11.2□□□□□ -0.62
CTSA-213ENST00000606782 PTTG3PQ9NZH4 202 aa11.2□□□□□ -0.62
CTSA-213ENST00000606782 ZNF319Q9P2F9 582 aa11.2□□□□□ -0.62
CTSA-213ENST00000606782 DOCK11Q5JSL3 2073 aa11.2□□□□□ -0.62
CTSA-213ENST00000606782 TMEM269A0A1B0GVZ9 245 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 TMEM89A2RUT3 159 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 C5orf63A6NC05 138 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 TRIM77I1YAP6 450 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 J3QLW9 94 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 MLNRO43193 412 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 RGS10O43665 173 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 MRPS14O60783 128 aaKnown RBP11.19□□□□□ -0.62
CTSA-213ENST00000606782 WNT2P09544 360 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 SELEP16581 610 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 ZNF19P17023 458 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 MYL12AP19105 171 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 ANOS1P23352 680 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 RBMXP38159 391 aaKnown RBP11.19□□□□□ -0.62
CTSA-213ENST00000606782 SRP9P49458 86 aaKnown RBP11.19□□□□□ -0.62
CTSA-213ENST00000606782 PSMA6P60900 246 aaKnown RBP11.19□□□□□ -0.62
CTSA-213ENST00000606782 PAX2Q02962 417 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 ZNF154Q13106 437 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 SNAI3Q3KNW1 292 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 TP53I3Q53FA7 332 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 FDX2Q6P4F2 183 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 PRSS48Q7RTY5 328 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 OR5AS1Q8N127 324 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 CELF2-AS1Q8N7Q2 184 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 OR52H1Q8NGJ2 320 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 RORBQ92753 470 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 SGK3Q96BR1 496 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 C4orf36Q96KX1 117 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 TMEM165Q9HC07 324 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 CHCHD3Q9NX63 227 aaKnown RBP11.19□□□□□ -0.62
CTSA-213ENST00000606782 BABAM2Q9NXR7 383 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 GNG8Q9UK08 70 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 BLOC1S6Q9UL45 172 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 LRCH1Q9Y2L9 728 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 INSIG2Q9Y5U4 225 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 SNX5Q9Y5X3 404 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 R4GMQ9 66 aa11.19□□□□□ -0.62
CTSA-213ENST00000606782 H0YL77 283 aa11.18□□□□□ -0.62
CTSA-213ENST00000606782 HAX1O00165 279 aa11.18□□□□□ -0.62
CTSA-213ENST00000606782 RPP14O95059 124 aaKnown RBP11.18□□□□□ -0.62
CTSA-213ENST00000606782 ANXA2P07355 339 aaKnown RBP11.18□□□□□ -0.62
CTSA-213ENST00000606782 HTR1AP08908 422 aa11.18□□□□□ -0.62
CTSA-213ENST00000606782 PPIAL4GP0DN37 164 aa11.18□□□□□ -0.62
CTSA-213ENST00000606782 SLC2A1P11166 492 aa11.18□□□□□ -0.62
CTSA-213ENST00000606782 FPR2P25090 351 aa11.18□□□□□ -0.62
CTSA-213ENST00000606782 GABARAPL2P60520 117 aa11.18□□□□□ -0.62
CTSA-213ENST00000606782 PAX8Q06710 450 aa11.18□□□□□ -0.62
CTSA-213ENST00000606782 MRPL28Q13084 256 aaKnown RBP11.18□□□□□ -0.62
CTSA-213ENST00000606782 GK2Q14410 553 aaPredicted RBP11.18□□□□□ -0.62
CTSA-213ENST00000606782 ZNF829Q3KNS6 432 aaPredicted RBP11.18□□□□□ -0.62
CTSA-213ENST00000606782 C12orf54Q6X4T0 127 aa11.18□□□□□ -0.62
CTSA-213ENST00000606782 TMPRSS11AQ6ZMR5 421 aa11.18□□□□□ -0.62
CTSA-213ENST00000606782 FAM57BQ71RH2 274 aa11.18□□□□□ -0.62
CTSA-213ENST00000606782 CATSPERDQ86XM0 798 aa11.18□□□□□ -0.62
CTSA-213ENST00000606782 ZDHHC22Q8N966 263 aa11.18□□□□□ -0.62
CTSA-213ENST00000606782 OR52N1Q8NH53 320 aa11.18□□□□□ -0.62
CTSA-213ENST00000606782 ERGIC1Q969X5 290 aa11.18□□□□□ -0.62
CTSA-213ENST00000606782 PPP1R14AQ96A00 147 aa11.18□□□□□ -0.62
CTSA-213ENST00000606782 SPSB4Q96A44 273 aa11.18□□□□□ -0.62
CTSA-213ENST00000606782 DACT3Q96B18 629 aaPredicted RBP11.18□□□□□ -0.62
CTSA-213ENST00000606782 PELI1Q96FA3 418 aa11.18□□□□□ -0.62
CTSA-213ENST00000606782 SLC6A7Q99884 636 aa11.18□□□□□ -0.62
CTSA-213ENST00000606782 TMEM100Q9NV29 134 aa11.18□□□□□ -0.62
CTSA-213ENST00000606782 OR52A1Q9UKL2 312 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 177 ms