RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, human

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF540-204	ENST00000586792	TRIP10	Q15642	601 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	TEX30	Q5JUR7	227 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	CLVS2	Q5SYC1	327 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	GPR157	Q5UAW9	335 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	AGAP6	Q5VW22	663 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	TMEM268	Q5VZI3	342 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	REP15	Q6BDI9	236 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	RNASEK	Q6P5S7	137 aa	Known RBP	4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	ULK3	Q6PHR2	472 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	DHRS4L2	Q6PKH6	230 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	PAQR6	Q6TCH4	344 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	PAMR1	Q6UXH9	720 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792		Q6ZT83	130 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	GPR141	Q7Z602	305 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	SERPINA11	Q86U17	422 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	CCDC190	Q86UF4	302 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	CDC20B	Q86Y33	519 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	RBM45	Q8IUH3	476 aa	Known RBP	4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	ZNF680	Q8NEM1	530 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	OR8J3	Q8NGG0	315 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	LHFPL5	Q8TAF8	219 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	FANK1	Q8TC84	345 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	CAPSL	Q8WWF8	208 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	PROX1	Q92786	737 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	GGH	Q92820	318 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	SLC38A4	Q969I6	547 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	RFT1	Q96AA3	541 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	ORAI1	Q96D31	301 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	COQ2	Q96H96	371 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	ZNF570	Q96NI8	536 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	DUX5	Q96PT3	197 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	KLHDC3	Q9BQ90	382 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	PCGF1	Q9BSM1	259 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	CHID1	Q9BWS9	393 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	POTEKP	Q9BYX7	375 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	SP140L	Q9H930	580 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	UBTD1	Q9HAC8	227 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	NTN4	Q9HB63	628 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	TUBG2	Q9NRH3	451 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	RHBDL2	Q9NX52	303 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	SLC25A37	Q9NYZ2	338 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	NLK	Q9UBE8	527 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	RSL24D1	Q9UHA3	163 aa	Known RBP	4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	FOXJ3	Q9UPW0	622 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	TRAPPC4	Q9Y296	219 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	AP3M1	Q9Y2T2	418 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	RHBDD3	Q9Y3P4	386 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	DOCK7	Q96N67	2140 aa		4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	USP9Y	O00507	2555 aa	Predicted RBP	4.04	□□□□□ -1.76
ZNF540-204	ENST00000586792	DNAJC13	O75165	2243 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	CACNA1C	Q13936	2221 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	OBSCN	Q5VST9	7968 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	IGKV3D-15	A0A087WSY6	115 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792		A0A1W2PPQ1	181 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	PLSCR5	A0PG75	271 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	METTL21EP	A6NDL7	271 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	CBY3	A6NI87	242 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	FAM25A	B3EWG3	89 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	FAM25C	B3EWG5	89 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	FAM25G	B3EWG6	89 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	MCIDAS	D6RGH6	385 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	AIM2	O14862	343 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	CLOCK	O15516	846 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	EFNA2	O43921	213 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	UPK3A	O75631	287 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	LYZL6	O75951	148 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	RPP14	O95059	124 aa	Known RBP	4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	IGHV3-9	P01782	118 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	OPN1SW	P03999	348 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	ZNF43	P17038	809 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	GGT1	P19440	569 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	PSMB1	P20618	241 aa	Known RBP	4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	CRYGS	P22914	178 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	DUSP1	P28562	367 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	OTX1	P32242	354 aa	Predicted RBP	4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	CDX1	P47902	265 aa	Predicted RBP	4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	NUDT2	P50583	147 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	CEBPG	P53567	150 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	AP2S1	P53680	142 aa	Predicted RBP	4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	TAS2R41	P59536	307 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	SNRPE	P62304	92 aa	Known RBP	4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	BNIP2	Q12982	314 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	C1D	Q13901	141 aa	Known RBP	4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	MFSD13A	Q14CX5	517 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	GUSBP1	Q15486	140 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	DNAL1	Q4LDG9	190 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	AWAT1	Q58HT5	328 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	C1orf140	Q5VVS0	124 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	FBXW9	Q5XUX1	488 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	ELP2	Q6IA86	826 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	PRR27	Q6MZM9	219 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	NANOGP8	Q6NSW7	305 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	TFAP2E	Q6VUC0	442 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	STAC2	Q6ZMT1	411 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	UTS2B	Q765I0	119 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	AAED1	Q7RTV5	226 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	NUFIP2	Q7Z417	695 aa	Known RBP	4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	HAPLN4	Q86UW8	402 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	P2RY8	Q86VZ1	359 aa		4.03	□□□□□ -1.76

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