RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 MRGBPQ9NV56 204 aa3.31□□□□□ -1.88
DDX42-211ENST00000580108 NKIRAS2Q9NYR9 191 aa3.31□□□□□ -1.88
DDX42-211ENST00000580108 DNAJC27Q9NZQ0 273 aa3.31□□□□□ -1.88
DDX42-211ENST00000580108 ZNF319Q9P2F9 582 aa3.31□□□□□ -1.88
DDX42-211ENST00000580108 DUX4Q9UBX2 424 aa3.31□□□□□ -1.88
DDX42-211ENST00000580108 ZNF69Q9UC07 566 aa3.31□□□□□ -1.88
DDX42-211ENST00000580108 KCNG2Q9UJ96 466 aa3.31□□□□□ -1.88
DDX42-211ENST00000580108 ZNF580Q9UK33 172 aa3.31□□□□□ -1.88
DDX42-211ENST00000580108 NDRG4Q9ULP0 352 aaKnown RBP3.31□□□□□ -1.88
DDX42-211ENST00000580108 TMCC3Q9ULS5 477 aa3.31□□□□□ -1.88
DDX42-211ENST00000580108 KLHDC2Q9Y2U9 406 aa3.31□□□□□ -1.88
DDX42-211ENST00000580108 SAMHD1Q9Y3Z3 626 aaKnown RBP3.31□□□□□ -1.88
DDX42-211ENST00000580108 PPIAL4AQ9Y536 164 aa3.31□□□□□ -1.88
DDX42-211ENST00000580108 NPTNQ9Y639 398 aa3.31□□□□□ -1.88
DDX42-211ENST00000580108 COMMD3-BMI1R4GMX3 469 aa3.31□□□□□ -1.88
DDX42-211ENST00000580108 PKD1L1Q8TDX9 2849 aa3.31□□□□□ -1.88
DDX42-211ENST00000580108 IQCF6A8MYZ5 107 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 PRR32B1ATL7 298 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 F5H0A9 414 aaPredicted RBP3.3□□□□□ -1.88
DDX42-211ENST00000580108 TMEM178BH3BS89 294 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 M0QYG6 137 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 M0R135 149 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 PSMD9O00233 223 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 ZNF593O00488 134 aaPredicted RBP3.3□□□□□ -1.88
DDX42-211ENST00000580108 NDUFAB1O14561 156 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 ACOT8O14734 319 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 ARPC3O15145 178 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 MAGEB4O15481 346 aaPredicted RBP3.3□□□□□ -1.88
DDX42-211ENST00000580108 TCF21O43680 179 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 SELENOFO60613 162 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 ENTPD5O75356 428 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 DCTN3O75935 186 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 MT-ND5P03915 603 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 CD55P08174 381 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 NR2C1P13056 603 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 SELLP14151 372 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 ZNF12P17014 697 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 CA6P23280 308 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 POU1F1P28069 291 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 CRABP1P29762 137 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 NAA10P41227 235 aaPredicted RBP3.3□□□□□ -1.88
DDX42-211ENST00000580108 MAGEA2P43356 314 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 LINC00205P59089 165 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 GMFBP60983 142 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 LSM6P62312 80 aaKnown RBP3.3□□□□□ -1.88
DDX42-211ENST00000580108 BTG1P62324 171 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 CSNK2BP67870 215 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 MRPS11P82912 194 aaKnown RBP3.3□□□□□ -1.88
DDX42-211ENST00000580108 MAB21L1Q13394 359 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 ODF1Q14990 250 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 ZNF260Q3ZCT1 412 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 SLC36A3Q495N2 470 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 KLHL12Q53G59 568 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 LINC01590Q5TEZ4 76 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 DCAF12L2Q5VW00 463 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 RUSC1-AS1Q66K80 236 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 SFRP4Q6FHJ7 346 aaPredicted RBP3.3□□□□□ -1.88
DDX42-211ENST00000580108 OR2T5Q6IEZ7 315 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 LCN8Q6JVE9 175 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 FBXW12Q6X9E4 464 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 BRD3OSQ6XYD6 125 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 DCXRQ7Z4W1 244 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 BCDIN3DQ7Z5W3 292 aaKnown RBP3.3□□□□□ -1.88
DDX42-211ENST00000580108 WDR86Q86TI4 376 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 LRRC28Q86X40 367 aaPredicted RBP3.3□□□□□ -1.88
DDX42-211ENST00000580108 DHFR2Q86XF0 187 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 RFLNBQ8N5W9 214 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 SIGLECL1Q8N7X8 197 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 ZDHHC22Q8N966 263 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 PNLDC1Q8NA58 520 aaKnown RBP3.3□□□□□ -1.88
DDX42-211ENST00000580108 GJC3Q8NFK1 279 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 OR8G5Q8NG78 346 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 OR10G2Q8NGC3 310 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 OR56B2PQ8NGI1 322 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 OR6K6Q8NGW6 343 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 OR6N2Q8NGY6 317 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 OR2AJ1Q8NGZ0 328 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 OR2T29Q8NH02 315 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 FNDC8Q8TC99 324 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 CANT1Q8WVQ1 401 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 RAB1CQ92928 201 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 PTP4A1Q93096 173 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 APOBEC3DQ96AK3 386 aaPredicted RBP3.3□□□□□ -1.88
DDX42-211ENST00000580108 MCUR1Q96AQ8 359 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 RAB39BQ96DA2 213 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 SLAMF6Q96DU3 332 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 ZMYND19Q96E35 227 aaPredicted RBP3.3□□□□□ -1.88
DDX42-211ENST00000580108 ZNF799Q96GE5 643 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 TIMD4Q96H15 378 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 LRGUKQ96M69 825 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 C1orf147Q96MC9 270 aaPredicted RBP3.3□□□□□ -1.88
DDX42-211ENST00000580108 FEVQ99581 238 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 ATF6BQ99941 703 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 SLC30A2Q9BRI3 323 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 TMEM246Q9BRR3 403 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 THTPAQ9BU02 230 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 RBM4Q9BWF3 364 aaKnown RBP3.3□□□□□ -1.88
DDX42-211ENST00000580108 NMNAT2Q9BZQ4 307 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 NDEL1Q9GZM8 345 aa3.3□□□□□ -1.88
DDX42-211ENST00000580108 HDHD2Q9H0R4 259 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms