RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 RPP14O95059 124 aaKnown RBP12.1□□□□□ -0.47
MKS1-207ENST00000578789 ZNF205O95201 554 aa12.1□□□□□ -0.47
MKS1-207ENST00000578789 WNT2P09544 360 aa12.1□□□□□ -0.47
MKS1-207ENST00000578789 GATA3P23771 443 aa12.1□□□□□ -0.47
MKS1-207ENST00000578789 THBS2P35442 1172 aa12.1□□□□□ -0.47
MKS1-207ENST00000578789 CFHR2P36980 270 aa12.1□□□□□ -0.47
MKS1-207ENST00000578789 SEC61A1P61619 476 aaKnown RBP12.1□□□□□ -0.47
MKS1-207ENST00000578789 RIPPLY1Q0D2K3 151 aa12.1□□□□□ -0.47
MKS1-207ENST00000578789 LRRC36Q1X8D7 754 aa12.1□□□□□ -0.47
MKS1-207ENST00000578789 FAM76BQ5HYJ3 339 aa12.1□□□□□ -0.47
MKS1-207ENST00000578789 ZNF826PQ6ZT77 177 aa12.1□□□□□ -0.47
MKS1-207ENST00000578789 FAM220AQ7Z4H9 259 aa12.1□□□□□ -0.47
MKS1-207ENST00000578789 ZDHHC23Q8IYP9 409 aa12.1□□□□□ -0.47
MKS1-207ENST00000578789 GCSAMQ8N6F7 178 aa12.1□□□□□ -0.47
MKS1-207ENST00000578789 PIGCQ92535 297 aa12.1□□□□□ -0.47
MKS1-207ENST00000578789 RORBQ92753 470 aa12.1□□□□□ -0.47
MKS1-207ENST00000578789 RNF166Q96A37 237 aaPredicted RBP12.1□□□□□ -0.47
MKS1-207ENST00000578789 ACOXLQ9NUZ1 547 aa12.1□□□□□ -0.47
MKS1-207ENST00000578789 MRPS18AQ9NVS2 196 aaKnown RBP12.1□□□□□ -0.47
MKS1-207ENST00000578789 MIOXQ9UGB7 285 aa12.1□□□□□ -0.47
MKS1-207ENST00000578789 SLC22A13Q9Y226 551 aa12.1□□□□□ -0.47
MKS1-207ENST00000578789 LRCH1Q9Y2L9 728 aa12.1□□□□□ -0.47
MKS1-207ENST00000578789 V9GYS6 101 aa12.1□□□□□ -0.47
MKS1-207ENST00000578789 A0A0G2JMP0 313 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 A0A0X1KG70 313 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 DAPL1A0PJW8 107 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 KIAA1324LA8MWY0 1029 aaPredicted RBP12.09□□□□□ -0.47
MKS1-207ENST00000578789 WBP4O75554 376 aaKnown RBP12.09□□□□□ -0.47
MKS1-207ENST00000578789 LHBP01229 141 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 IGHA1P01876 353 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 RPS2P15880 293 aaKnown RBP12.09□□□□□ -0.47
MKS1-207ENST00000578789 FAHP16930 419 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 SRD5A1P18405 259 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 ZFP36P26651 326 aaKnown RBP12.09□□□□□ -0.47
MKS1-207ENST00000578789 CSNK2BP67870 215 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 ELF3P78545 371 aaPredicted RBP12.09□□□□□ -0.47
MKS1-207ENST00000578789 LCN2P80188 198 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 TP53I3Q53FA7 332 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 WDR38Q5JTN6 314 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 ZNF691Q5VV52 312 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 TEX36Q5VZQ5 186 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 TTC23Q5W5X9 447 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 TMEM42Q69YG0 159 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 WDR82Q6UXN9 313 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 DCDC5Q6ZRR9 648 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 DOK3Q7L591 496 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 THAP5Q7Z6K1 395 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 ACBD7Q8N6N7 88 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 OR4M2Q8NGB6 313 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 OR14K1Q8NGZ2 314 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 TRIM36Q9NQ86 728 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 ENPP5Q9UJA9 477 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 GNG8Q9UK08 70 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 PIGLQ9Y2B2 252 aa12.09□□□□□ -0.47
MKS1-207ENST00000578789 RPL36Q9Y3U8 105 aaKnown RBP12.09□□□□□ -0.47
MKS1-207ENST00000578789 JMJD1CQ15652 2540 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 hCG_1807616A0A1W2PRN6 198 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 OOEPA6NGQ2 149 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 J3QLI3 93 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 P2RY10O00398 339 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 EGR1P18146 543 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 CD80P33681 288 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 ACTA2P62736 377 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 ACTG2P63267 376 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 ADARB1P78563 741 aaKnown RBP12.08□□□□□ -0.48
MKS1-207ENST00000578789 HOXA4Q00056 320 aaPredicted RBP12.08□□□□□ -0.48
MKS1-207ENST00000578789 RAB40BQ12829 278 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 KCNJ8Q15842 424 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 CEACAM21Q3KPI0 293 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 ESCO2Q56NI9 601 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 FDX2Q6P4F2 183 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 KCTD20Q7Z5Y7 419 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 EGFL6Q8IUX8 553 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 C19orf18Q8NEA5 215 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 CCDC54Q8NEL0 328 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 OR10Z1Q8NGY1 313 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 LRRC29Q8WV35 223 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 NEIL1Q96FI4 390 aaPredicted RBP12.08□□□□□ -0.48
MKS1-207ENST00000578789 RNF170Q96K19 258 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 ZNF649Q9BS31 505 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 TMPRSS13Q9BYE2 586 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 DCLRE1BQ9H816 532 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 INPP5EQ9NRR6 644 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 BOLA1Q9Y3E2 137 aa12.08□□□□□ -0.48
MKS1-207ENST00000578789 ARHGAP32A7KAX9 2087 aa12.07□□□□□ -0.48
MKS1-207ENST00000578789 TRAV38-1A0A0B4J264 116 aa12.07□□□□□ -0.48
MKS1-207ENST00000578789 A0A1B0GVI7 797 aa12.07□□□□□ -0.48
MKS1-207ENST00000578789 OR5B21A6NL26 309 aa12.07□□□□□ -0.48
MKS1-207ENST00000578789 SRRM5B3KS81 715 aa12.07□□□□□ -0.48
MKS1-207ENST00000578789 TNFRSF13BO14836 293 aaPredicted RBP12.07□□□□□ -0.48
MKS1-207ENST00000578789 CLIC3O95833 236 aa12.07□□□□□ -0.48
MKS1-207ENST00000578789 FADS2O95864 444 aaKnown RBP12.07□□□□□ -0.48
MKS1-207ENST00000578789 PSMB10P40306 273 aa12.07□□□□□ -0.48
MKS1-207ENST00000578789 KIR3DL2P43630 455 aa12.07□□□□□ -0.48
MKS1-207ENST00000578789 GNG3P63215 75 aa12.07□□□□□ -0.48
MKS1-207ENST00000578789 IL18R1Q13478 541 aa12.07□□□□□ -0.48
MKS1-207ENST00000578789 GALEQ14376 348 aa12.07□□□□□ -0.48
MKS1-207ENST00000578789 DCAF12L2Q5VW00 463 aa12.07□□□□□ -0.48
MKS1-207ENST00000578789 NLRC3Q7RTR2 1065 aa12.07□□□□□ -0.48
MKS1-207ENST00000578789 SYS1Q8N2H4 156 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms