RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 OR2C1O95371 312 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 WISP1O95388 367 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 PGCP20142 388 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 FOXL2P58012 376 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 GUK1Q16774 197 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 ACTBL2Q562R1 376 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 C1QL3Q5VWW1 255 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 RHBDD2Q6NTF9 364 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 POMZP3Q6PJE2 187 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 OPN5Q6U736 354 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 DCXRQ7Z4W1 244 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 MDGA2Q7Z553 956 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 OR10D4PQ8NGN7 298 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 OR13D1Q8NGV5 346 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 OR6X1Q8NH79 312 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 PIGQQ9BRB3 760 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 TGIF2Q9GZN2 237 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 FAM212BQ9NTI7 297 aaPredicted RBP12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 DOK5Q9P104 306 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 LAMP5Q9UJQ1 280 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 IKZF2Q9UKS7 526 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 SRPK3Q9UPE1 567 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 KLHDC2Q9Y2U9 406 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 MEMO1Q9Y316 297 aa12.38□□□□□ -0.43
RABGGTA-220ENST00000560998 CACNA1EQ15878 2313 aa12.37□□□□□ -0.43
RABGGTA-220ENST00000560998 A0A1W2PPE2 198 aa12.37□□□□□ -0.43
RABGGTA-220ENST00000560998 H7C1C5 153 aa12.37□□□□□ -0.43
RABGGTA-220ENST00000560998 TOX3O15405 576 aaPredicted RBP12.37□□□□□ -0.43
RABGGTA-220ENST00000560998 ADAP1O75689 374 aa12.37□□□□□ -0.43
RABGGTA-220ENST00000560998 NUDT14O95848 222 aa12.37□□□□□ -0.43
RABGGTA-220ENST00000560998 AKR1C4P17516 323 aa12.37□□□□□ -0.43
RABGGTA-220ENST00000560998 NDUFA6P56556 154 aa12.37□□□□□ -0.43
RABGGTA-220ENST00000560998 LCN6P62502 163 aa12.37□□□□□ -0.43
RABGGTA-220ENST00000560998 TMEM128Q5BJH2 165 aa12.37□□□□□ -0.43
RABGGTA-220ENST00000560998 RPL7L1Q6DKI1 246 aaKnown RBP12.37□□□□□ -0.43
RABGGTA-220ENST00000560998 OR9K2Q8NGE7 335 aa12.37□□□□□ -0.43
RABGGTA-220ENST00000560998 OR10AC1Q8NH08 325 aa12.37□□□□□ -0.43
RABGGTA-220ENST00000560998 PBDC1Q9BVG4 233 aa12.37□□□□□ -0.43
RABGGTA-220ENST00000560998 KCNK15Q9H427 330 aa12.37□□□□□ -0.43
RABGGTA-220ENST00000560998 WDR76Q9H967 626 aa12.37□□□□□ -0.43
RABGGTA-220ENST00000560998 SRA1Q9HD15 236 aaKnown RBP12.37□□□□□ -0.43
RABGGTA-220ENST00000560998 OR5AC2Q9NZP5 309 aa12.37□□□□□ -0.43
RABGGTA-220ENST00000560998 IGHV3-20A0A0C4DH32 117 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 A0A1B0GW64 132 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 MEGF11A6BM72 1044 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 CXorf65A6NEN9 183 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 RAB27BO00194 218 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 PPP1R2P9O14990 202 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 SCGNO76038 276 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 RENP00797 406 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 CSN2P05814 226 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 RPS10P46783 165 aaKnown RBP12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 POLR2HP52434 150 aaKnown RBP12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 RPS23P62266 143 aaKnown RBP12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 RABEPKQ7Z6M1 372 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 PRSS35Q8N3Z0 413 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 DTWD2Q8NBA8 298 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 ADAD2Q8NCV1 583 aaKnown RBP12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 OR51A4Q8NGJ6 313 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 STT3BQ8TCJ2 826 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 C2orf50Q96LR7 162 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 NOL4LQ96MY1 436 aaPredicted RBP12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 SLC35B3Q9H1N7 401 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 KCNIP3Q9Y2W7 256 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 CBY1Q9Y3M2 126 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 SIT1Q9Y3P8 196 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 IGLV3-12A0A075B6K2 115 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 TMED7-TICAM2A0A0A6YYA0 188 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 SFT2D2O95562 160 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 IFNA6P05013 189 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 ARG1P05089 322 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 PNLIPP16233 465 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 CHATP28329 748 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 EPHA8P29322 1005 aaPredicted RBP12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 CCKBRP32239 447 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 KIR3DL2P43630 455 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 GAMTQ14353 236 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 CLINT1Q14677 625 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 CDPF1Q6NVV7 123 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 TRAPPC6BQ86SZ2 158 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 FJX1Q86VR8 437 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 HOGA1Q86XE5 327 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 BEND2Q8NDZ0 799 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 GPR119Q8TDV5 335 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 SCRT1Q9BWW7 348 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 KCNJ16Q9NPI9 418 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 GTF2A1LQ9UNN4 478 aa12.36□□□□□ -0.43
RABGGTA-220ENST00000560998 EXPH5Q8NEV8 1989 aa12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 SOX1O00570 391 aaPredicted RBP12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 SYT7O43581 403 aa12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 NPIPB7O75200 414 aa12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 PTBP3O95758 552 aaKnown RBP12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 GPANK1O95872 356 aa12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 MT-ATP6P00846 226 aa12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 DAOP14920 347 aa12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 SUCLG1P53597 346 aaKnown RBP12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 NUTF2P61970 127 aaKnown RBP12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 LSM6P62312 80 aaKnown RBP12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 ACY1Q03154 408 aa12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 SQSTM1Q13501 440 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms