RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 RRP8O43159 456 aaKnown RBP2.89□□□□□ -1.95
SYNE2-210ENST00000553455 PLIN3O60664 434 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 RCBTB2O95199 551 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 PLEKHA8P1O95397 391 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 CSTAP01040 98 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 PTHP01270 115 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 APLNRP35414 380 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 PCK1P35558 622 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 HCCSP53701 268 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 ZNF616Q08AN1 781 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 INCA1Q0VD86 236 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 NAB1Q13506 487 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 PIGHQ14442 188 aaPredicted RBP2.89□□□□□ -1.95
SYNE2-210ENST00000553455 YIF1BQ5BJH7 314 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 UNQ9165/PRO28630Q6UXU0 137 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 HMGN2P46Q86SG4 172 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 ARHGAP18Q8N392 663 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 OR9A2Q8NGT5 310 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 OR13G1Q8NGZ3 307 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 MITD1Q8WV92 249 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 DCAKDQ8WVC6 231 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 DEDD2Q8WXF8 326 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 ZNF75CPQ92670 426 aaPredicted RBP2.89□□□□□ -1.95
SYNE2-210ENST00000553455 SMARCD1Q96GM5 515 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 LINC00477Q96M19 166 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 TMEM175Q9BSA9 504 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 SFXN3Q9BWM7 321 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 GAL3ST2Q9H3Q3 398 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 HEBP1Q9NRV9 189 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 C21orf62Q9NYP8 219 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 FARSAQ9Y285 508 aaKnown RBP2.89□□□□□ -1.95
SYNE2-210ENST00000553455 LRRC42Q9Y546 428 aa2.89□□□□□ -1.95
SYNE2-210ENST00000553455 IGLV3-12A0A075B6K2 115 aa2.88□□□□□ -1.95
SYNE2-210ENST00000553455 A8MUU9 505 aa2.88□□□□□ -1.95
SYNE2-210ENST00000553455 RPL36A-HNRNPH2H7BZ11 118 aa2.88□□□□□ -1.95
SYNE2-210ENST00000553455 MANBAO00462 879 aa2.88□□□□□ -1.95
SYNE2-210ENST00000553455 CHMP2AO43633 222 aa2.88□□□□□ -1.95
SYNE2-210ENST00000553455 TRAPPC6AO75865 159 aa2.88□□□□□ -1.95
SYNE2-210ENST00000553455 SMC2O95347 1197 aa2.88□□□□□ -1.95
SYNE2-210ENST00000553455 TTC4O95801 387 aa2.88□□□□□ -1.95
SYNE2-210ENST00000553455 PTTG1O95997 202 aa2.88□□□□□ -1.95
SYNE2-210ENST00000553455 ARL2P36404 184 aa2.88□□□□□ -1.95
SYNE2-210ENST00000553455 KRTAP5-2Q701N4 177 aa2.88□□□□□ -1.95
SYNE2-210ENST00000553455 GATSQ8NAP1 163 aa2.88□□□□□ -1.95
SYNE2-210ENST00000553455 S100PBPQ96BU1 408 aa2.88□□□□□ -1.95
SYNE2-210ENST00000553455 SULT4A1Q9BR01 284 aa2.88□□□□□ -1.95
SYNE2-210ENST00000553455 TMEM100Q9NV29 134 aa2.88□□□□□ -1.95
SYNE2-210ENST00000553455 IFNKQ9P0W0 207 aa2.88□□□□□ -1.95
SYNE2-210ENST00000553455 NDRG2Q9UN36 371 aaKnown RBP2.88□□□□□ -1.95
SYNE2-210ENST00000553455 UPK1BO75841 260 aa2.87□□□□□ -1.95
SYNE2-210ENST00000553455 CYB5R3P00387 301 aaPredicted RBP2.87□□□□□ -1.95
SYNE2-210ENST00000553455 GNRHRP30968 328 aa2.87□□□□□ -1.95
SYNE2-210ENST00000553455 CMC4P56277 68 aaPredicted RBP2.87□□□□□ -1.95
SYNE2-210ENST00000553455 PSMC5P62195 406 aa2.87□□□□□ -1.95
SYNE2-210ENST00000553455 SLC35A1P78382 337 aa2.87□□□□□ -1.95
SYNE2-210ENST00000553455 SLC35B1P78383 322 aa2.87□□□□□ -1.95
SYNE2-210ENST00000553455 HSP90AA4PQ58FG1 418 aa2.87□□□□□ -1.95
SYNE2-210ENST00000553455 CPTPQ5TA50 214 aa2.87□□□□□ -1.95
SYNE2-210ENST00000553455 SLC25A25Q6KCM7 469 aa2.87□□□□□ -1.95
SYNE2-210ENST00000553455 Q6ZSR6 202 aa2.87□□□□□ -1.95
SYNE2-210ENST00000553455 NEGR1Q7Z3B1 354 aa2.87□□□□□ -1.95
SYNE2-210ENST00000553455 ERO1BQ86YB8 467 aa2.87□□□□□ -1.95
SYNE2-210ENST00000553455 ZNF561Q8N587 486 aa2.87□□□□□ -1.95
SYNE2-210ENST00000553455 OR6K6Q8NGW6 343 aa2.87□□□□□ -1.95
SYNE2-210ENST00000553455 OR10Z1Q8NGY1 313 aa2.87□□□□□ -1.95
SYNE2-210ENST00000553455 CACNG8Q8WXS5 425 aa2.87□□□□□ -1.95
SYNE2-210ENST00000553455 FAM131CQ96AQ9 280 aa2.87□□□□□ -1.95
SYNE2-210ENST00000553455 ZNF2Q9BSG1 426 aaPredicted RBP2.87□□□□□ -1.95
SYNE2-210ENST00000553455 IGHV1-3A0A0C4DH29 117 aa2.86□□□□□ -1.95
SYNE2-210ENST00000553455 GOLGA8JA6NMD2 632 aa2.86□□□□□ -1.95
SYNE2-210ENST00000553455 BOLA2-SMG1P6H3BVE0 249 aa2.86□□□□□ -1.95
SYNE2-210ENST00000553455 K7EM74 188 aa2.86□□□□□ -1.95
SYNE2-210ENST00000553455 GATBO75879 557 aaKnown RBP2.86□□□□□ -1.95
SYNE2-210ENST00000553455 RBBP9O75884 186 aa2.86□□□□□ -1.95
SYNE2-210ENST00000553455 IL4P05112 153 aa2.86□□□□□ -1.95
SYNE2-210ENST00000553455 GOLGA8HP0CJ92 632 aa2.86□□□□□ -1.95
SYNE2-210ENST00000553455 HSPD1P10809 573 aaKnown RBP2.86□□□□□ -1.95
SYNE2-210ENST00000553455 HOXB8P17481 243 aaPredicted RBP2.86□□□□□ -1.95
SYNE2-210ENST00000553455 PRSS8Q16651 343 aa2.86□□□□□ -1.95
SYNE2-210ENST00000553455 ATP6V1FQ16864 119 aa2.86□□□□□ -1.95
SYNE2-210ENST00000553455 KRTAP13-2Q52LG2 175 aa2.86□□□□□ -1.95
SYNE2-210ENST00000553455 FAM222AQ5U5X8 452 aa2.86□□□□□ -1.95
SYNE2-210ENST00000553455 MFSD14CQ5VZR4 134 aa2.86□□□□□ -1.95
SYNE2-210ENST00000553455 EPGNQ6UW88 154 aa2.86□□□□□ -1.95
SYNE2-210ENST00000553455 RNF182Q8N6D2 247 aa2.86□□□□□ -1.95
SYNE2-210ENST00000553455 SLC35G3Q8N808 338 aa2.86□□□□□ -1.95
SYNE2-210ENST00000553455 OR13C9Q8NGT0 318 aa2.86□□□□□ -1.95
SYNE2-210ENST00000553455 RTN4IP1Q8WWV3 396 aaPredicted RBP2.86□□□□□ -1.95
SYNE2-210ENST00000553455 TMEM159Q96B96 161 aa2.86□□□□□ -1.95
SYNE2-210ENST00000553455 ZNF717Q9BY31 904 aaPredicted RBP2.86□□□□□ -1.95
SYNE2-210ENST00000553455 ZSCAN16Q9H4T2 348 aaPredicted RBP2.86□□□□□ -1.95
SYNE2-210ENST00000553455 FLVCR2Q9UPI3 526 aa2.86□□□□□ -1.95
SYNE2-210ENST00000553455 PPIL1Q9Y3C6 166 aa2.86□□□□□ -1.95
SYNE2-210ENST00000553455 WIF1Q9Y5W5 379 aa2.86□□□□□ -1.95
SYNE2-210ENST00000553455 ZNF608Q9ULD9 1512 aaPredicted RBP2.86□□□□□ -1.95
SYNE2-210ENST00000553455 COL27A1Q8IZC6 1860 aaPredicted RBP2.86□□□□□ -1.95
SYNE2-210ENST00000553455 IGLV2-18A0A075B6J9 118 aa2.85□□□□□ -1.95
SYNE2-210ENST00000553455 IGHV6-1A0A0B4J1U7 121 aa2.85□□□□□ -1.95
SYNE2-210ENST00000553455 IGHV2OR16-5A0A0B4J2B6 119 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms