RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 FAM131CQ96AQ9 280 aa3.62□□□□□ -1.83
LEMD3-206ENST00000545026 SULT4A1Q9BR01 284 aa3.62□□□□□ -1.83
LEMD3-206ENST00000545026 SFXN3Q9BWM7 321 aa3.62□□□□□ -1.83
LEMD3-206ENST00000545026 VAX2Q9UIW0 290 aa3.62□□□□□ -1.83
LEMD3-206ENST00000545026 IGHV3-49A0A0A0MS15 119 aa3.61□□□□□ -1.83
LEMD3-206ENST00000545026 GOLGA8JA6NMD2 632 aa3.61□□□□□ -1.83
LEMD3-206ENST00000545026 M0R1X1 148 aa3.61□□□□□ -1.83
LEMD3-206ENST00000545026 PLIN3O60664 434 aa3.61□□□□□ -1.83
LEMD3-206ENST00000545026 TRAPPC6AO75865 159 aa3.61□□□□□ -1.83
LEMD3-206ENST00000545026 SMC2O95347 1197 aa3.61□□□□□ -1.83
LEMD3-206ENST00000545026 GOLGA8HP0CJ92 632 aa3.61□□□□□ -1.83
LEMD3-206ENST00000545026 PTNP21246 168 aa3.61□□□□□ -1.83
LEMD3-206ENST00000545026 PRLHRP49683 370 aa3.61□□□□□ -1.83
LEMD3-206ENST00000545026 HCCSP53701 268 aa3.61□□□□□ -1.83
LEMD3-206ENST00000545026 INCA1Q0VD86 236 aa3.61□□□□□ -1.83
LEMD3-206ENST00000545026 PIGHQ14442 188 aaPredicted RBP3.61□□□□□ -1.83
LEMD3-206ENST00000545026 ATP6V1FQ16864 119 aa3.61□□□□□ -1.83
LEMD3-206ENST00000545026 SLC25A25Q6KCM7 469 aa3.61□□□□□ -1.83
LEMD3-206ENST00000545026 ZNF615Q8N8J6 731 aa3.61□□□□□ -1.83
LEMD3-206ENST00000545026 ASCC1Q8N9N2 400 aaKnown RBP3.61□□□□□ -1.83
LEMD3-206ENST00000545026 OR13C9Q8NGT0 318 aa3.61□□□□□ -1.83
LEMD3-206ENST00000545026 OR13G1Q8NGZ3 307 aa3.61□□□□□ -1.83
LEMD3-206ENST00000545026 SMARCD1Q96GM5 515 aa3.61□□□□□ -1.83
LEMD3-206ENST00000545026 PLEKHF2Q9H8W4 249 aa3.61□□□□□ -1.83
LEMD3-206ENST00000545026 FBXO6Q9NRD1 293 aaPredicted RBP3.61□□□□□ -1.83
LEMD3-206ENST00000545026 HEBP1Q9NRV9 189 aa3.61□□□□□ -1.83
LEMD3-206ENST00000545026 C21orf62Q9NYP8 219 aa3.61□□□□□ -1.83
LEMD3-206ENST00000545026 NDRG2Q9UN36 371 aaKnown RBP3.61□□□□□ -1.83
LEMD3-206ENST00000545026 FARSAQ9Y285 508 aaKnown RBP3.61□□□□□ -1.83
LEMD3-206ENST00000545026 CBY1Q9Y3M2 126 aa3.61□□□□□ -1.83
LEMD3-206ENST00000545026 SLC35A1P78382 337 aa3.6□□□□□ -1.83
LEMD3-206ENST00000545026 CPTPQ5TA50 214 aa3.6□□□□□ -1.83
LEMD3-206ENST00000545026 MFSD14CQ5VZR4 134 aa3.6□□□□□ -1.83
LEMD3-206ENST00000545026 Q6ZSR6 202 aa3.6□□□□□ -1.83
LEMD3-206ENST00000545026 ERO1BQ86YB8 467 aa3.6□□□□□ -1.83
LEMD3-206ENST00000545026 FAM58AQ8N1B3 248 aa3.6□□□□□ -1.83
LEMD3-206ENST00000545026 GATSQ8NAP1 163 aa3.6□□□□□ -1.83
LEMD3-206ENST00000545026 LINC00477Q96M19 166 aa3.6□□□□□ -1.83
LEMD3-206ENST00000545026 CHCHD7Q9BUK0 85 aa3.6□□□□□ -1.83
LEMD3-206ENST00000545026 NUDT9Q9BW91 350 aa3.6□□□□□ -1.83
LEMD3-206ENST00000545026 RSPO3Q9BXY4 272 aaPredicted RBP3.6□□□□□ -1.83
LEMD3-206ENST00000545026 TM6SF2Q9BZW4 377 aa3.6□□□□□ -1.83
LEMD3-206ENST00000545026 LZTFL1Q9NQ48 299 aa3.6□□□□□ -1.83
LEMD3-206ENST00000545026 LRRC42Q9Y546 428 aa3.6□□□□□ -1.83
LEMD3-206ENST00000545026 BZW2Q9Y6E2 419 aaKnown RBP3.6□□□□□ -1.83
LEMD3-206ENST00000545026 S4R3C0 116 aa3.6□□□□□ -1.83
LEMD3-206ENST00000545026 ZNF608Q9ULD9 1512 aaPredicted RBP3.6□□□□□ -1.83
LEMD3-206ENST00000545026 ANKRD12Q6UB98 2062 aa3.59□□□□□ -1.83
LEMD3-206ENST00000545026 TRAV40A0A0B4J280 105 aa3.59□□□□□ -1.83
LEMD3-206ENST00000545026 IGHV2OR16-5A0A0B4J2B6 119 aa3.59□□□□□ -1.83
LEMD3-206ENST00000545026 CCL15-CCL14A0A0B4J2E2 113 aa3.59□□□□□ -1.83
LEMD3-206ENST00000545026 IGKV6-21A0A0C4DH24 114 aa3.59□□□□□ -1.83
LEMD3-206ENST00000545026 GSTTP1A0A1W2PQM5 241 aa3.59□□□□□ -1.83
LEMD3-206ENST00000545026 RRP8O43159 456 aaKnown RBP3.59□□□□□ -1.83
LEMD3-206ENST00000545026 RCBTB2O95199 551 aa3.59□□□□□ -1.83
LEMD3-206ENST00000545026 GNRHRP30968 328 aa3.59□□□□□ -1.83
LEMD3-206ENST00000545026 ST3GAL4Q11206 333 aa3.59□□□□□ -1.83
LEMD3-206ENST00000545026 CCL15Q16663 113 aa3.59□□□□□ -1.83
LEMD3-206ENST00000545026 UNQ9165/PRO28630Q6UXU0 137 aa3.59□□□□□ -1.83
LEMD3-206ENST00000545026 OR51A7Q8NH64 312 aa3.59□□□□□ -1.83
LEMD3-206ENST00000545026 CACNG8Q8WXS5 425 aa3.59□□□□□ -1.83
LEMD3-206ENST00000545026 CPNE4Q96A23 557 aaPredicted RBP3.59□□□□□ -1.83
LEMD3-206ENST00000545026 CIDECQ96AQ7 238 aaPredicted RBP3.59□□□□□ -1.83
LEMD3-206ENST00000545026 CENPNQ96H22 339 aaPredicted RBP3.59□□□□□ -1.83
LEMD3-206ENST00000545026 NAPGQ99747 312 aaPredicted RBP3.59□□□□□ -1.83
LEMD3-206ENST00000545026 TMEM100Q9NV29 134 aa3.59□□□□□ -1.83
LEMD3-206ENST00000545026 AQRO60306 1485 aaKnown RBP eCLIP3.59□□□□□ -1.84
LEMD3-206ENST00000545026 GATBO75879 557 aaKnown RBP3.58□□□□□ -1.84
LEMD3-206ENST00000545026 IL4P05112 153 aa3.58□□□□□ -1.84
LEMD3-206ENST00000545026 SLC35G6P0C7Q6 338 aa3.58□□□□□ -1.84
LEMD3-206ENST00000545026 HSPD1P10809 573 aaKnown RBP3.58□□□□□ -1.84
LEMD3-206ENST00000545026 C2orf54Q08AI8 447 aa3.58□□□□□ -1.84
LEMD3-206ENST00000545026 ZNF616Q08AN1 781 aa3.58□□□□□ -1.84
LEMD3-206ENST00000545026 LY6EQ16553 131 aa3.58□□□□□ -1.84
LEMD3-206ENST00000545026 FAM222AQ5U5X8 452 aa3.58□□□□□ -1.84
LEMD3-206ENST00000545026 ZNF101Q8IZC7 436 aa3.58□□□□□ -1.84
LEMD3-206ENST00000545026 SLC7A5P1Q8MH63 180 aa3.58□□□□□ -1.84
LEMD3-206ENST00000545026 LINC00469Q8N7U9 141 aa3.58□□□□□ -1.84
LEMD3-206ENST00000545026 SPANXA2-OT1Q8N9U9 137 aa3.58□□□□□ -1.84
LEMD3-206ENST00000545026 DEDD2Q8WXF8 326 aa3.58□□□□□ -1.84
LEMD3-206ENST00000545026 RNF170Q96K19 258 aa3.58□□□□□ -1.84
LEMD3-206ENST00000545026 MAP1LC3CQ9BXW4 147 aa3.58□□□□□ -1.84
LEMD3-206ENST00000545026 IGLV3-12A0A075B6K2 115 aa3.57□□□□□ -1.84
LEMD3-206ENST00000545026 RPL36A-HNRNPH2H7BZ11 118 aa3.57□□□□□ -1.84
LEMD3-206ENST00000545026 MYL12BO14950 172 aa3.57□□□□□ -1.84
LEMD3-206ENST00000545026 CCDC22O60826 627 aa3.57□□□□□ -1.84
LEMD3-206ENST00000545026 CYB5R3P00387 301 aaPredicted RBP3.57□□□□□ -1.84
LEMD3-206ENST00000545026 NUP62P37198 522 aaPredicted RBP3.57□□□□□ -1.84
LEMD3-206ENST00000545026 ATP5J2P56134 94 aa3.57□□□□□ -1.84
LEMD3-206ENST00000545026 MLF1P58340 268 aa3.57□□□□□ -1.84
LEMD3-206ENST00000545026 MTPNP58546 118 aa3.57□□□□□ -1.84
LEMD3-206ENST00000545026 TAS2R60P59551 318 aa3.57□□□□□ -1.84
LEMD3-206ENST00000545026 RPL31P62899 125 aaKnown RBP3.57□□□□□ -1.84
LEMD3-206ENST00000545026 XIAPP98170 497 aa3.57□□□□□ -1.84
LEMD3-206ENST00000545026 KRTAP13-3Q3SY46 172 aa3.57□□□□□ -1.84
LEMD3-206ENST00000545026 C6orf183Q5T699 404 aa3.57□□□□□ -1.84
LEMD3-206ENST00000545026 DUPD1Q68J44 220 aa3.57□□□□□ -1.84
LEMD3-206ENST00000545026 EPGNQ6UW88 154 aa3.57□□□□□ -1.84
LEMD3-206ENST00000545026 HMGN2P46Q86SG4 172 aa3.57□□□□□ -1.84
LEMD3-206ENST00000545026 OR1S1Q8NH92 325 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms