RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 TMEM42Q69YG0 159 aa16.42■□□□□ 0.22
DDX55-207ENST00000540763 RPL22L1Q6P5R6 122 aaKnown RBP16.42■□□□□ 0.22
DDX55-207ENST00000540763 ZDHHC23Q8IYP9 409 aa16.42■□□□□ 0.22
DDX55-207ENST00000540763 C18orf12Q96KH6 178 aa16.42■□□□□ 0.22
DDX55-207ENST00000540763 RTL8AQ9BWD3 113 aa16.42■□□□□ 0.22
DDX55-207ENST00000540763 COMMD4Q9H0A8 199 aa16.42■□□□□ 0.22
DDX55-207ENST00000540763 TRIM36Q9NQ86 728 aa16.42■□□□□ 0.22
DDX55-207ENST00000540763 TMEM106BQ9NUM4 274 aa16.42■□□□□ 0.22
DDX55-207ENST00000540763 BABAM2Q9NXR7 383 aa16.42■□□□□ 0.22
DDX55-207ENST00000540763 CLEC2DQ9UHP7 191 aa16.42■□□□□ 0.22
DDX55-207ENST00000540763 HHLA2Q9UM44 414 aa16.42■□□□□ 0.22
DDX55-207ENST00000540763 ERGIC3Q9Y282 383 aa16.42■□□□□ 0.22
DDX55-207ENST00000540763 PIGLQ9Y2B2 252 aa16.42■□□□□ 0.22
DDX55-207ENST00000540763 PCDHGB5Q9Y5G0 923 aa16.42■□□□□ 0.22
DDX55-207ENST00000540763 TMEM210A6NLX4 147 aa16.41■□□□□ 0.22
DDX55-207ENST00000540763 H7C1Q1 480 aa16.41■□□□□ 0.22
DDX55-207ENST00000540763 FSTL3O95633 263 aa16.41■□□□□ 0.22
DDX55-207ENST00000540763 FAHP16930 419 aa16.41■□□□□ 0.22
DDX55-207ENST00000540763 C21orf33P30042 268 aaPredicted RBP16.41■□□□□ 0.22
DDX55-207ENST00000540763 WNT4P56705 351 aa16.41■□□□□ 0.22
DDX55-207ENST00000540763 TAS2R43P59537 309 aa16.41■□□□□ 0.22
DDX55-207ENST00000540763 CDK5R1Q15078 307 aa16.41■□□□□ 0.22
DDX55-207ENST00000540763 CLVS2Q5SYC1 327 aa16.41■□□□□ 0.22
DDX55-207ENST00000540763 OR5P3Q8WZ94 311 aa16.41■□□□□ 0.22
DDX55-207ENST00000540763 PIGCQ92535 297 aa16.41■□□□□ 0.22
DDX55-207ENST00000540763 CCL17Q92583 94 aa16.41■□□□□ 0.22
DDX55-207ENST00000540763 HPS1Q92902 700 aa16.41■□□□□ 0.22
DDX55-207ENST00000540763 TIMD4Q96H15 378 aa16.41■□□□□ 0.22
DDX55-207ENST00000540763 MICU1Q9BPX6 476 aa16.41■□□□□ 0.22
DDX55-207ENST00000540763 PLEKHA1Q9HB21 404 aa16.41■□□□□ 0.22
DDX55-207ENST00000540763 PAK1IP1Q9NWT1 392 aaPredicted RBP16.41■□□□□ 0.22
DDX55-207ENST00000540763 FLNAP21333 2647 aaKnown RBP16.4■□□□□ 0.22
DDX55-207ENST00000540763 LOC100289279A0A1B0GTE1 492 aa16.4■□□□□ 0.22
DDX55-207ENST00000540763 ZNF850A8MQ14 1090 aa16.4■□□□□ 0.22
DDX55-207ENST00000540763 RNF223E7ERA6 249 aa16.4■□□□□ 0.22
DDX55-207ENST00000540763 PTGES3LE9PB15 166 aa16.4■□□□□ 0.22
DDX55-207ENST00000540763 E9PI62 339 aa16.4■□□□□ 0.22
DDX55-207ENST00000540763 USF1P22415 310 aaPredicted RBP16.4■□□□□ 0.22
DDX55-207ENST00000540763 BDH1Q02338 343 aa16.4■□□□□ 0.22
DDX55-207ENST00000540763 ODF4Q2M2E3 257 aa16.4■□□□□ 0.22
DDX55-207ENST00000540763 CEACAM21Q3KPI0 293 aa16.4■□□□□ 0.22
DDX55-207ENST00000540763 PEG10Q86TG7 708 aaKnown RBP16.4■□□□□ 0.22
DDX55-207ENST00000540763 C1orf87Q8N0U7 546 aa16.4■□□□□ 0.22
DDX55-207ENST00000540763 ZNF676Q8N7Q3 588 aa16.4■□□□□ 0.22
DDX55-207ENST00000540763 NANOGP1Q8N7R0 232 aa16.4■□□□□ 0.22
DDX55-207ENST00000540763 OR5AK2Q8NH90 309 aa16.4■□□□□ 0.22
DDX55-207ENST00000540763 HPSE2Q8WWQ2 592 aa16.4■□□□□ 0.22
DDX55-207ENST00000540763 PP6455Q8WZ26 134 aa16.4■□□□□ 0.22
DDX55-207ENST00000540763 RAB1CQ92928 201 aa16.4■□□□□ 0.22
DDX55-207ENST00000540763 DVL3Q92997 716 aaPredicted RBP16.4■□□□□ 0.22
DDX55-207ENST00000540763 TECTBQ96PL2 329 aa16.4■□□□□ 0.22
DDX55-207ENST00000540763 MND1Q9BWT6 205 aa16.4■□□□□ 0.22
DDX55-207ENST00000540763 FN3KRPQ9HA64 309 aa16.4■□□□□ 0.22
DDX55-207ENST00000540763 CACNG2Q9Y698 323 aa16.4■□□□□ 0.22
DDX55-207ENST00000540763 ZNF469Q96JG9 3925 aaPredicted RBP16.4■□□□□ 0.22
DDX55-207ENST00000540763 NIPBLQ6KC79 2804 aaeCLIP16.4■□□□□ 0.22
DDX55-207ENST00000540763 TRBV2A0A0J9YWF9 115 aa16.39■□□□□ 0.21
DDX55-207ENST00000540763 OR5B21A6NL26 309 aa16.39■□□□□ 0.21
DDX55-207ENST00000540763 LRRC30A6NM36 301 aa16.39■□□□□ 0.21
DDX55-207ENST00000540763 OGG1O15527 345 aa16.39■□□□□ 0.21
DDX55-207ENST00000540763 PPIHO43447 177 aaKnown RBP16.39■□□□□ 0.21
DDX55-207ENST00000540763 ZFPL1O95159 310 aa16.39■□□□□ 0.21
DDX55-207ENST00000540763 NRASP01111 189 aa16.39■□□□□ 0.21
DDX55-207ENST00000540763 FAM76BQ5HYJ3 339 aa16.39■□□□□ 0.21
DDX55-207ENST00000540763 MOGAT3Q86VF5 341 aa16.39■□□□□ 0.21
DDX55-207ENST00000540763 OR5A2Q8NGI9 324 aa16.39■□□□□ 0.21
DDX55-207ENST00000540763 OR11L1Q8NGX0 322 aa16.39■□□□□ 0.21
DDX55-207ENST00000540763 SMIM19Q96E16 107 aa16.39■□□□□ 0.21
DDX55-207ENST00000540763 HIST1H2AAQ96QV6 131 aa16.39■□□□□ 0.21
DDX55-207ENST00000540763 CHST5Q9GZS9 411 aa16.39■□□□□ 0.21
DDX55-207ENST00000540763 TLNRD1Q9H1K6 362 aa16.39■□□□□ 0.21
DDX55-207ENST00000540763 TMEM178BH3BS89 294 aa16.38■□□□□ 0.21
DDX55-207ENST00000540763 RGS10O43665 173 aa16.38■□□□□ 0.21
DDX55-207ENST00000540763 INHBBP09529 407 aa16.38■□□□□ 0.21
DDX55-207ENST00000540763 CHN2P52757 468 aa16.38■□□□□ 0.21
DDX55-207ENST00000540763 GABARAPL2P60520 117 aa16.38■□□□□ 0.21
DDX55-207ENST00000540763 ACSM1Q08AH1 577 aa16.38■□□□□ 0.21
DDX55-207ENST00000540763 ZNF154Q13106 437 aa16.38■□□□□ 0.21
DDX55-207ENST00000540763 IRF3Q14653 427 aa16.38■□□□□ 0.21
DDX55-207ENST00000540763 PRSS48Q7RTY5 328 aa16.38■□□□□ 0.21
DDX55-207ENST00000540763 OR1M1Q8NGA1 313 aa16.38■□□□□ 0.21
DDX55-207ENST00000540763 GATAD2BQ8WXI9 593 aa16.38■□□□□ 0.21
DDX55-207ENST00000540763 YTHDF1Q9BYJ9 559 aaKnown RBP16.38■□□□□ 0.21
DDX55-207ENST00000540763 WIPI2Q9Y4P8 454 aa16.38■□□□□ 0.21
DDX55-207ENST00000540763 NPTNQ9Y639 398 aa16.38■□□□□ 0.21
DDX55-207ENST00000540763 ABCA2Q9BZC7 2435 aa16.38■□□□□ 0.21
DDX55-207ENST00000540763 ANKRD61A6NGH8 418 aa16.37■□□□□ 0.21
DDX55-207ENST00000540763 MRPS14O60783 128 aaKnown RBP16.37■□□□□ 0.21
DDX55-207ENST00000540763 GATBO75879 557 aaKnown RBP16.37■□□□□ 0.21
DDX55-207ENST00000540763 CD1AP06126 327 aa16.37■□□□□ 0.21
DDX55-207ENST00000540763 IRF2P14316 349 aa16.37■□□□□ 0.21
DDX55-207ENST00000540763 HOXB4P17483 251 aaPredicted RBP16.37■□□□□ 0.21
DDX55-207ENST00000540763 CFHR2P36980 270 aa16.37■□□□□ 0.21
DDX55-207ENST00000540763 GTF2A1P52655 376 aaPredicted RBP16.37■□□□□ 0.21
DDX55-207ENST00000540763 GNG3P63215 75 aa16.37■□□□□ 0.21
DDX55-207ENST00000540763 PRAMEF6Q5VXH4 476 aa16.37■□□□□ 0.21
DDX55-207ENST00000540763 PLCXD3Q63HM9 321 aa16.37■□□□□ 0.21
DDX55-207ENST00000540763 DMKNQ6E0U4 476 aaPredicted RBP16.37■□□□□ 0.21
DDX55-207ENST00000540763 XAF1Q6GPH4 301 aa16.37■□□□□ 0.21
DDX55-207ENST00000540763 WDR86Q86TI4 376 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms