RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 LNX2Q8N448 690 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 IQCF1Q8N6M8 205 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 ZNF614Q8N883 585 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 SAMD12Q8N8I0 201 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 ZDHHC22Q8N966 263 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 OR4M2Q8NGB6 313 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 OR4M1Q8NGD0 313 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 OR5T2Q8NGG2 359 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 OR4D11Q8NGI4 311 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 CLDND2Q8NHS1 167 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 ZNF563Q8TA94 476 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 OIT3Q8WWZ8 545 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 RAB40AQ8WXH6 277 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 NSMAFQ92636 917 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 THRSPQ92748 146 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 CDS1Q92903 461 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 RBPMSQ93062 196 aaKnown RBP5.12□□□□□ -1.59
CPSF7-219ENST00000539952 TMEM45BQ96B21 275 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 SLC41A3Q96GZ6 507 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 MAP6Q96JE9 813 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 MCHR1Q99705 422 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 ZNF649Q9BS31 505 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 ALG8Q9BVK2 526 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 DPCDQ9BVM2 203 aaPredicted RBP5.12□□□□□ -1.59
CPSF7-219ENST00000539952 SF3B5Q9BWJ5 86 aaKnown RBP5.12□□□□□ -1.59
CPSF7-219ENST00000539952 SLITRK2Q9H156 845 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 RERGLQ9H628 205 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 EGLN3Q9H6Z9 239 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 SRA1Q9HD15 236 aaKnown RBP5.12□□□□□ -1.59
CPSF7-219ENST00000539952 DYNLRB1Q9NP97 96 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 ZC4H2Q9NQZ6 224 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 POLE3Q9NRF9 147 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 TAS2R8Q9NYW2 309 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 CHRNA9Q9UGM1 479 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 PFDN2Q9UHV9 154 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 FBXL3Q9UKT7 428 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 FLVCR1Q9Y5Y0 555 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 ANK2Q01484 3957 aa5.12□□□□□ -1.59
CPSF7-219ENST00000539952 A0A1W2PRG6 482 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 TRAPPC13A5PLN9 417 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 CDHR4A6H8M9 788 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 NPIPB9F8W1W9 429 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 LYNX1G3V0Z9 82 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 GABARAPH6UMI1 98 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 M0R3H8 397 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 OGG1O15527 345 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 ZNF208O43345 1280 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 SYNGR3O43761 229 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 VAMP5O95183 116 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 CSTAP01040 98 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 DBIP07108 87 aaKnown RBP5.11□□□□□ -1.59
CPSF7-219ENST00000539952 GUSBP08236 651 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 GIPP09681 153 aaPredicted RBP5.11□□□□□ -1.59
CPSF7-219ENST00000539952 OR2T7P0C7T2 308 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 LYNX1P0DP58 116 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 CALCBP10092 127 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 PRG2P13727 222 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 CBR1P16152 277 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 ZP3P21754 424 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 NFYAP23511 347 aaPredicted RBP5.11□□□□□ -1.59
CPSF7-219ENST00000539952 GATA3P23771 443 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 PRTN3P24158 256 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 COL8A2P25067 703 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 RBMXP38159 391 aaKnown RBP5.11□□□□□ -1.59
CPSF7-219ENST00000539952 MNDAP41218 407 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 TGM4P49221 684 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 MECP2P51608 486 aaKnown RBP5.11□□□□□ -1.59
CPSF7-219ENST00000539952 CCR4P51679 360 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 CCR9P51686 369 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 CAV3P56539 151 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 RGS8P57771 180 aaPredicted RBP5.11□□□□□ -1.59
CPSF7-219ENST00000539952 UBA52P62987 128 aaKnown RBP5.11□□□□□ -1.59
CPSF7-219ENST00000539952 IL13RA1P78552 427 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 MRPS11P82912 194 aaKnown RBP5.11□□□□□ -1.59
CPSF7-219ENST00000539952 SSBP1Q04837 148 aaKnown RBP5.11□□□□□ -1.59
CPSF7-219ENST00000539952 PUDPQ08623 228 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 EXOSC2Q13868 293 aaKnown RBP5.11□□□□□ -1.59
CPSF7-219ENST00000539952 DOC2BQ14184 412 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 SLC17A1Q14916 467 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 OPCMLQ14982 345 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 MFSD13AQ14CX5 517 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 ZNF141Q15928 474 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 ARHGAP11BQ3KRB8 267 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 LGALSLQ3ZCW2 172 aaPredicted RBP5.11□□□□□ -1.59
CPSF7-219ENST00000539952 ACSM3Q53FZ2 586 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 UBE2NLQ5JXB2 153 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 BCL2L15Q5TBC7 163 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 UNQ9370/PRO34162Q6UXP9 181 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 ZNF620Q6ZNG0 422 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 TMPRSS11FQ6ZWK6 438 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 GRINAQ7Z429 371 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 C1QL2Q7Z5L3 287 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 BCDIN3DQ7Z5W3 292 aaKnown RBP5.11□□□□□ -1.59
CPSF7-219ENST00000539952 BPIFB2Q8N4F0 458 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 EIF4E3Q8N5X7 224 aaKnown RBP5.11□□□□□ -1.59
CPSF7-219ENST00000539952 OR1K1Q8NGR3 316 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 OR2T27Q8NH04 317 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 TRMT10AQ8TBZ6 339 aaKnown RBP5.11□□□□□ -1.59
CPSF7-219ENST00000539952 SMIM4Q8WVI0 70 aa5.11□□□□□ -1.59
CPSF7-219ENST00000539952 FCAMRQ8WWV6 532 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms