RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 CLEC18CQ8NCF0 446 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 WFDC5Q8TCV5 224 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 NXPE3Q969Y0 559 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 AUNIPQ9H7T9 357 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 LAMB4A4D0S4 1761 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 A0A096LPE4 126 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 IGHV3-64DA0A0J9YX35 117 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 A0A1W2PPZ6 126 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 TCRBV5S1A1TA0A578 114 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 TCRBV5S2A0A599 114 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 OR10J1P30954 320 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 PPP1CBP62140 327 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 PPIAP62937 165 aaKnown RBP8.98□□□□□ -0.97
COL4A6-208ENST00000538570 PMP22Q01453 160 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 TMEM229BQ8NBD8 167 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 PPP1R1CQ8WVI7 109 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 SLC25A37Q9NYZ2 338 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 OR6C3Q9NZP0 311 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 SH2D7A6NKC9 451 aaPredicted RBP8.98□□□□□ -0.97
COL4A6-208ENST00000538570 H0YIG0 161 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 CTSLP07711 333 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 LIMS3P0CW19 117 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 LIMS4P0CW20 117 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 PNLIPRP3Q17RR3 467 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 SAMD13Q5VXD3 122 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 CA13Q8N1Q1 262 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 OSR2Q8N2R0 312 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 SIGLEC11Q96RL6 698 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 FGF22Q9HCT0 170 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 LTB4R2Q9NPC1 389 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 FBLL1A6NHQ2 334 aaKnown RBP8.98□□□□□ -0.97
COL4A6-208ENST00000538570 TMPRSS11DO60235 418 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 IL2RAP01589 272 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 CRYAAP02489 173 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 SULT1A3P0DMM9 295 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 SULT1A4P0DMN0 295 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 CD82P27701 267 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 ERVFC1-1P60608 527 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 GPNMBQ14956 572 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 OR4S1Q8NGB4 309 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 EDARADDQ8WWZ3 215 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 DUSP21Q9H596 190 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 SLC22A13Q9Y226 551 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 HRO43593 1189 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 ABLIM3O94929 683 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 FAM157BP0CG42 384 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 FA2HQ7L5A8 372 aa8.98□□□□□ -0.97
COL4A6-208ENST00000538570 BAHD1Q8TBE0 780 aaPredicted RBP8.98□□□□□ -0.97
COL4A6-208ENST00000538570 RTN4IP1Q8WWV3 396 aaPredicted RBP8.98□□□□□ -0.97
COL4A6-208ENST00000538570 FGF20Q9NP95 211 aaPredicted RBP8.98□□□□□ -0.97
COL4A6-208ENST00000538570 CXorf65A6NEN9 183 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 IDSB3KWA1 339 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 TNFSF11O14788 317 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 DPTQ07507 201 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 FZD2Q14332 565 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 HLXQ14774 488 aaPredicted RBP8.97□□□□□ -0.97
COL4A6-208ENST00000538570 PTCRAQ6ISU1 281 aaPredicted RBP8.97□□□□□ -0.97
COL4A6-208ENST00000538570 ARHGEF39Q8N4T4 335 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 OR4C16Q8NGL9 310 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 ATG101Q9BSB4 218 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 ST3GAL6Q9Y274 331 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 M0QZ24 198 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 DCTDP32321 178 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 CTF1Q16619 201 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 CCDC190Q86UF4 302 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 OR2T6Q8NHC8 308 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 HGDQ93099 445 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 MRGPRX4Q96LA9 322 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 ISG20L2Q9H9L3 353 aaKnown RBP8.97□□□□□ -0.97
COL4A6-208ENST00000538570 BCL2L10Q9HD36 194 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 MICAL3Q7RTP6 2002 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 CCDC187A0A096LP49 1063 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 TRAV1-2A0A0B4J238 106 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 UBE2L5PA0A1B0GUS4 154 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 ZNF195O14628 629 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 BMI1P35226 326 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 RFC3P40938 356 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 INSM1Q01101 510 aaPredicted RBP8.97□□□□□ -0.97
COL4A6-208ENST00000538570 MENTQ9BUN1 341 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 WSB2Q9NYS7 404 aaPredicted RBP8.97□□□□□ -0.97
COL4A6-208ENST00000538570 LRRC3CA6NJW4 275 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 HSBP1O75506 76 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 C5P01031 1676 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 EMDP50402 254 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 NOVA1P51513 510 aaKnown RBP8.97□□□□□ -0.97
COL4A6-208ENST00000538570 ZNF121P58317 390 aaPredicted RBP8.97□□□□□ -0.97
COL4A6-208ENST00000538570 ZNF816Q0VGE8 651 aaPredicted RBP8.97□□□□□ -0.97
COL4A6-208ENST00000538570 ELFN2Q5R3F8 820 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 STUMQ69YW2 141 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 SLC16A12Q6ZSM3 486 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 OR2W3Q7Z3T1 314 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 RIMKLAQ8IXN7 391 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 GALMQ96C23 342 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 SLCO1C1Q9NYB5 712 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 A6NDN8 102 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 KCNJ3P48549 501 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 MMP15P51511 669 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 DUSP2Q05923 314 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 OR2A1Q8NGT9 310 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 POM121L2Q96KW2 1035 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms