RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 NDUFB2O95178 105 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 LYPD3O95274 346 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 HMGA1P17096 107 aaKnown RBP6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 THBS4P35443 961 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 CARD18P57730 90 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 FXYD4P59646 89 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 CSNK1G2P78368 415 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 NTHL1P78549 312 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 H3F3AP84243 136 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 ARFRP1Q13795 201 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 EIF5AL1Q6IS14 154 aaKnown RBP6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 COMMD2Q86X83 199 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 OR1N1Q8NGS0 311 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 ZNF417Q8TAU3 575 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 SLC39A7Q92504 469 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 RAB24Q969Q5 203 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 TBX15Q96SF7 602 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 KLF16Q9BXK1 252 aaPredicted RBP6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 FOXQ1Q9C009 403 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 HAO2Q9NYQ3 351 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 MRPS28Q9Y2Q9 187 aaKnown RBP6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 TRPM6Q9BX84 2022 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 A0A1W2PPQ1 181 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 ZNF320A2RRD8 509 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 ANKUB1A6NFN9 424 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 SLC17A2O00624 439 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 HLA-HP01893 362 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 TACSTD2P09758 323 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 CD82P27701 267 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 TACR3P29371 465 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 RAB4BP61018 213 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 HSD11B2P80365 405 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 NAAAQ02083 359 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 MESP2Q0VG99 397 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 CLN3Q13286 438 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 PDCD1Q15116 288 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 PHLDA2Q53GA4 152 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 TMEM31Q5JXX7 168 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 DCST2Q5T1A1 773 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 PRAMEF8Q5VWM4 474 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 PRAMEF7Q5VXH5 474 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 LCN15Q6UWW0 184 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 WFDC8Q8IUA0 241 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 OR2G3Q8NGZ4 309 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 ZNF524Q96C55 264 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 SYT3Q9BQG1 590 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 LMF2Q9BU23 707 aaKnown RBP6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 NMNAT2Q9BZQ4 307 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 ELL3Q9HB65 397 aaPredicted RBP6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 APOBEC3BQ9UH17 382 aaKnown RBP6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 ICAM5Q9UMF0 924 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 SLC7A11Q9UPY5 501 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 POLR3KQ9Y2Y1 108 aaPredicted RBP6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 OR1A2Q9Y585 309 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 SSC5DA1L4H1 1573 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 A0A0A6YYD5 115 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 A0A0U1RQK1 487 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 GRIFINA4D1Z8 144 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 FAM24AA6NFZ4 105 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 H3BP45 60 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 MKRN2OSH3BPM6 223 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 RAD51DO75771 328 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 HPRT1P00492 218 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 POU2F2P09086 479 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 CT62P0C5K7 136 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 CTSAP10619 480 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 TOMM20LQ6UXN7 152 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 DGAT2L6Q6ZPD8 337 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 TMPRSS11FQ6ZWK6 438 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 OR56A1Q8NGH5 318 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 OR13C3Q8NGS6 347 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 TERB2Q8NHR7 220 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 MALSU1Q96EH3 234 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 VPS25Q9BRG1 176 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 RTBDNQ9BSG5 229 aaPredicted RBP6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 HDHD3Q9BSH5 251 aaPredicted RBP6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 PCGF1Q9BSM1 259 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 ZNF701Q9NV72 531 aaPredicted RBP6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 LUZP4Q9P127 313 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 MYOTQ9UBF9 498 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 TP73-AS1Q9UF72 201 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 RNF150Q9ULK6 438 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 RPH3ALQ9UNE2 315 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 RHBDD3Q9Y3P4 386 aa6.44□□□□□ -1.38
LIMCH1-207ENST00000508466 ZNF407Q9C0G0 2248 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 SLC35G6P0C7Q6 338 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 OR3A2P47893 321 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 ARRB1P49407 418 aaPredicted RBP6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 PRLHRP49683 370 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 FAM3BP58499 235 aaPredicted RBP6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 RPL23AP62750 156 aaKnown RBP6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 UNC119Q13432 240 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 ADIRFQ15847 76 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 PNLIPRP3Q17RR3 467 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 PRR31Q5SQ13 230 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 ARMC6Q6NXE6 501 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 DNM1P46Q6ZS02 220 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 SLC16A9Q7RTY1 509 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 NUP54Q7Z3B4 507 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 RD3Q7Z3Z2 195 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms