RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 NFYBP25208 207 aa11.88□□□□□ -0.51
GPC1-209ENST00000495100 GNRHRP30968 328 aa11.88□□□□□ -0.51
GPC1-209ENST00000495100 TGIF1Q15583 401 aa11.88□□□□□ -0.51
GPC1-209ENST00000495100 GUCA2BQ16661 112 aa11.88□□□□□ -0.51
GPC1-209ENST00000495100 CLPPQ16740 277 aaPredicted RBP11.88□□□□□ -0.51
GPC1-209ENST00000495100 PLEKHN1Q494U1 663 aaPredicted RBP11.88□□□□□ -0.51
GPC1-209ENST00000495100 PLCXD3Q63HM9 321 aa11.88□□□□□ -0.51
GPC1-209ENST00000495100 RPS19BP1Q86WX3 136 aaKnown RBP11.88□□□□□ -0.51
GPC1-209ENST00000495100 KCNRGQ8N5I3 272 aa11.88□□□□□ -0.51
GPC1-209ENST00000495100 KCNG3Q8TAE7 436 aa11.88□□□□□ -0.51
GPC1-209ENST00000495100 STOML3Q8TAV4 291 aa11.88□□□□□ -0.51
GPC1-209ENST00000495100 SGCZQ96LD1 299 aa11.88□□□□□ -0.51
GPC1-209ENST00000495100 NECAB3Q96P71 396 aaPredicted RBP11.88□□□□□ -0.51
GPC1-209ENST00000495100 MRI1Q9BV20 369 aa11.88□□□□□ -0.51
GPC1-209ENST00000495100 CHRDQ9H2X0 955 aa11.88□□□□□ -0.51
GPC1-209ENST00000495100 G6PC2Q9NQR9 355 aa11.88□□□□□ -0.51
GPC1-209ENST00000495100 C19orf25Q9UFG5 118 aaPredicted RBP11.88□□□□□ -0.51
GPC1-209ENST00000495100 LHFPL6Q9Y693 200 aa11.88□□□□□ -0.51
GPC1-209ENST00000495100 IFNA21P01568 189 aa11.88□□□□□ -0.51
GPC1-209ENST00000495100 MEF2DQ14814 521 aa11.88□□□□□ -0.51
GPC1-209ENST00000495100 DRAM2Q6UX65 266 aa11.88□□□□□ -0.51
GPC1-209ENST00000495100 ESX1Q8N693 406 aa11.88□□□□□ -0.51
GPC1-209ENST00000495100 OR5AC2Q9NZP5 309 aa11.88□□□□□ -0.51
GPC1-209ENST00000495100 A0A1W2PR77 199 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 ZNF806P0C7X5 589 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 RGS19P49795 217 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 FGL1Q08830 312 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 ZNF468Q5VIY5 522 aaPredicted RBP11.87□□□□□ -0.51
GPC1-209ENST00000495100 SLC36A1Q7Z2H8 476 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 OR5AS1Q8N127 324 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 EXD3Q8N9H8 876 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 ZNF519Q8TB69 540 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 IFI44Q8TCB0 444 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 SPACA9Q96E40 222 aaPredicted RBP11.87□□□□□ -0.51
GPC1-209ENST00000495100 RCL1Q9Y2P8 373 aaKnown RBP11.87□□□□□ -0.51
GPC1-209ENST00000495100 MED13Q9UHV7 2174 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 BLACEA4D250 179 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 WRBO00258 174 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 P04436 131 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 IL5P05113 134 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 CASRP41180 1078 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 CSRP2Q16527 193 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 FNDC7Q5VTL7 733 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 RPL7L1Q6DKI1 246 aaKnown RBP11.87□□□□□ -0.51
GPC1-209ENST00000495100 SLC16A14Q7RTX9 510 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 TERB2Q8NHR7 220 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 ST7LQ8TDW4 575 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 RHBDD1Q8TEB9 315 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 RNF166Q96A37 237 aaPredicted RBP11.87□□□□□ -0.51
GPC1-209ENST00000495100 GPX7Q96SL4 187 aaPredicted RBP11.87□□□□□ -0.51
GPC1-209ENST00000495100 RPS10P5Q9NQ39 176 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 PTTG3PQ9NZH4 202 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 B3GALT5Q9Y2C3 310 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 DENND4AQ7Z401 1863 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 PTPRSQ13332 1948 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 RAD51DO75771 328 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 S100A6P06703 90 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 ZNF84P51523 738 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 SRSF3P84103 164 aaKnown RBP11.87□□□□□ -0.51
GPC1-209ENST00000495100 PLGLB1Q02325 96 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 PIGYQ3MUY2 71 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 NHLRC3Q5JS37 347 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 CLEC18BQ6UXF7 455 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 D2HGDHQ8N465 521 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 SPICQ8N5J4 248 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 LRFN5Q96NI6 719 aa11.87□□□□□ -0.51
GPC1-209ENST00000495100 OR2M5A3KFT3 312 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 ANKUB1A6NFN9 424 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 OR6C76A6NM76 312 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 SPINK14Q6IE38 97 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 ETV3LQ6ZN32 361 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 AAED1Q7RTV5 226 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 CCDC36Q8IYA8 594 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 SPAG16Q8N0X2 631 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 MFSD8Q8NHS3 518 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 FNDC9Q8TBE3 224 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 SGK3Q96BR1 496 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 PCDHB16Q9NRJ7 776 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 P4HTMQ9NXG6 502 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 ZNF629Q9UEG4 869 aaPredicted RBP11.86□□□□□ -0.51
GPC1-209ENST00000495100 URGCP-MRPS24S4R325 110 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 TRAV14DV4A0A0A6YYC5 116 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 HS3ST1O14792 307 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 HSPA12AO43301 675 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 PLAC9Q5JTB6 97 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 OR2A2Q6IF42 318 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 ACOT7LQ6ZUV0 252 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 FBXL14Q8N1E6 418 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 NOXO1Q8NFA2 376 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 OR5M8Q8NGP6 311 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 OR1S1Q8NH92 325 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 HLA-CQ95604 372 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 ISOC2Q96AB3 205 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 ARPC5LQ9BPX5 153 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 EML5Q05BV3 1969 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 WNK2Q9Y3S1 2297 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 IGHV5-10-1A0A0J9YXX1 117 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 E9PLN8 166 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 CDK2AP1O14519 115 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 PHF1O43189 567 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms