RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 PIGGQ5H8A4 983 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 TCEAL5Q5H9L2 206 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 KHDRBS2Q5VWX1 349 aaKnown RBP1.54□□□□□ -2.16
LMNB1-207ENST00000494185 METTL21CQ5VZV1 264 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 STEAP4Q687X5 459 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 PLET1Q6UQ28 207 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 IGFL2Q6UWQ7 119 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 RTL4Q6ZR62 310 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 SSX7Q7RTT5 188 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 MRPL52Q86TS9 123 aaKnown RBP1.54□□□□□ -2.16
LMNB1-207ENST00000494185 ZNF429Q86V71 674 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 NELFCDQ8IXH7 590 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 PRSS58Q8IYP2 241 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 SLC7A5P1Q8MH63 180 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 NECAP1Q8NC96 275 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 ZNF738Q8NE65 137 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 OR2L8Q8NGY9 312 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 OR51Q1Q8NH59 317 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 UBA3Q8TBC4 463 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 NT5CQ8TCD5 201 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 PIFOQ8TCI5 191 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.54□□□□□ -2.16
LMNB1-207ENST00000494185 TCEAL3Q969E4 200 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 ADTRPQ96IZ2 230 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 ZNF75AQ96N20 296 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 ZNF285Q96NJ3 590 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 CATSPER2Q96P56 530 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 HBEGFQ99075 208 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 ZNF251Q9BRH9 671 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 BBS2Q9BXC9 721 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 SAMD10Q9BYL1 202 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 NDEL1Q9GZM8 345 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 COA1Q9GZY4 146 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 SPNS1Q9H2V7 528 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 CDC42EP4Q9H3Q1 356 aaKnown RBP1.54□□□□□ -2.16
LMNB1-207ENST00000494185 EDA2RQ9HAV5 297 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 TMEM27Q9HBJ8 222 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 ZDHHC4Q9NPG8 344 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 FBXO8Q9NRD0 319 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 VAX2Q9UIW0 290 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 ZNF223Q9UK11 482 aaPredicted RBP1.54□□□□□ -2.16
LMNB1-207ENST00000494185 HES2Q9Y543 173 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 ATP6V1DQ9Y5K8 247 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 UBIAD1Q9Y5Z9 338 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 PUS1Q9Y606 427 aaKnown RBP eCLIP1.54□□□□□ -2.16
LMNB1-207ENST00000494185 URGCP-MRPS24S4R325 110 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 LRPPRCP42704 1394 aaKnown RBP1.54□□□□□ -2.16
LMNB1-207ENST00000494185 CAMTA1Q9Y6Y1 1673 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 DENND4AQ7Z401 1863 aa1.54□□□□□ -2.16
LMNB1-207ENST00000494185 HMCN1Q96RW7 5635 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 IGLV4-69A0A075B6H9 119 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 IGLV1-50A0A075B6I6 118 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 IGKV1-8A0A0C4DH67 115 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 FAM240AA0A1B0GVK7 77 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 INS-IGF2F8WCM5 200 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 GOLGA8RI6L899 631 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 TNFRSF11BO00300 401 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 CDIPTO14735 213 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 PSPHP1O15172 72 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 CRXO43186 299 aaPredicted RBP1.53□□□□□ -2.16
LMNB1-207ENST00000494185 CD5LO43866 347 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 MEGF6O75095 1541 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 NIPSNAP2O75323 286 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 NDUFS6O75380 124 aaKnown RBP1.53□□□□□ -2.16
LMNB1-207ENST00000494185 SPAG7O75391 227 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 GABARAPO95166 117 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 BCHEP06276 602 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 GP1BAP07359 652 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 MMP7P09237 267 aaPredicted RBP1.53□□□□□ -2.16
LMNB1-207ENST00000494185 LIPCP11150 499 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 TCN2P20062 427 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 SYT1P21579 422 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 TEAD1P28347 426 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 GTF2H1P32780 548 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 CD70P32970 193 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 KDELR2P33947 212 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 SSTR5P35346 364 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 GALR1P47211 349 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 UBE2AP49459 152 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 NDUFA8P51970 172 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 ZNF136P52737 540 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 EMP2P54851 167 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 SKP1P63208 163 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 UBE2IP63279 158 aaKnown RBP1.53□□□□□ -2.16
LMNB1-207ENST00000494185 IFITM3Q01628 133 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 MN1Q10571 1320 aaPredicted RBP1.53□□□□□ -2.16
LMNB1-207ENST00000494185 MAPRE2Q15555 327 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 UBE2SQ16763 222 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 RBM48Q5RL73 367 aaKnown RBP1.53□□□□□ -2.16
LMNB1-207ENST00000494185 IDNKQ5T6J7 187 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 SYT6Q5T7P8 510 aaPredicted RBP1.53□□□□□ -2.16
LMNB1-207ENST00000494185 LCE3AQ5TA76 89 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 ZCCHC6Q5VYS8 1495 aaKnown RBP1.53□□□□□ -2.16
LMNB1-207ENST00000494185 THOC7Q6I9Y2 204 aaKnown RBP1.53□□□□□ -2.16
LMNB1-207ENST00000494185 FAM71E1Q6IPT2 247 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 Q6P435 159 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 EPGNQ6UW88 154 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 Q6ZT83 130 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 AHSA2Q719I0 299 aa1.53□□□□□ -2.16
LMNB1-207ENST00000494185 CYP4Z1Q86W10 505 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms