RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 NDUFA2O43678 99 aa11.27□□□□□ -0.61
VPS52-218ENST00000482399 ZNF217O75362 1048 aa11.27□□□□□ -0.61
VPS52-218ENST00000482399 CCNOP22674 350 aa11.27□□□□□ -0.61
VPS52-218ENST00000482399 CAPZBP47756 277 aa11.27□□□□□ -0.61
VPS52-218ENST00000482399 TLE1Q04724 770 aa11.27□□□□□ -0.61
VPS52-218ENST00000482399 AQP3Q92482 292 aa11.27□□□□□ -0.61
VPS52-218ENST00000482399 DYRK2Q92630 601 aa11.27□□□□□ -0.61
VPS52-218ENST00000482399 ZDHHC12Q96GR4 267 aa11.27□□□□□ -0.61
VPS52-218ENST00000482399 PFDN5Q99471 154 aa11.27□□□□□ -0.61
VPS52-218ENST00000482399 SEC11CQ9BY50 192 aa11.27□□□□□ -0.61
VPS52-218ENST00000482399 CNTNAP3Q9BZ76 1288 aa11.27□□□□□ -0.61
VPS52-218ENST00000482399 PLEK2Q9NYT0 353 aa11.27□□□□□ -0.61
VPS52-218ENST00000482399 SHANK1Q9Y566 2161 aa11.27□□□□□ -0.61
VPS52-218ENST00000482399 H7C1Q1 480 aa11.27□□□□□ -0.61
VPS52-218ENST00000482399 HSPB6O14558 160 aa11.27□□□□□ -0.61
VPS52-218ENST00000482399 LY86O95711 162 aa11.27□□□□□ -0.61
VPS52-218ENST00000482399 BPNT1O95861 308 aa11.27□□□□□ -0.61
VPS52-218ENST00000482399 CD74P04233 296 aa11.27□□□□□ -0.61
VPS52-218ENST00000482399 TEX30Q5JUR7 227 aa11.27□□□□□ -0.61
VPS52-218ENST00000482399 AKR7LQ8NHP1 331 aa11.27□□□□□ -0.61
VPS52-218ENST00000482399 TCTEX1D2Q8WW35 142 aa11.27□□□□□ -0.61
VPS52-218ENST00000482399 C7orf77A4D0Y5 90 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 WRBO00258 174 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 GPR37O15354 613 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 IFNA2P01563 188 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 CHRM2P08172 466 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 S100A2P29034 98 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 HAGHQ16775 308 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 PLAC9Q5JTB6 97 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 DDIT4LQ96D03 193 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 MAGT1Q9H0U3 335 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 LPAR5Q9H1C0 372 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 SERINC1Q9NRX5 453 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 RCC2Q9P258 522 aaKnown RBP11.26□□□□□ -0.61
VPS52-218ENST00000482399 MEX3AA1L020 520 aaKnown RBP11.26□□□□□ -0.61
VPS52-218ENST00000482399 ZNHIT1O43257 154 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 CDC14BO60729 498 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 RAD51DO75771 328 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 HEXBP07686 556 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 ACAA1P09110 424 aaPredicted RBP11.26□□□□□ -0.61
VPS52-218ENST00000482399 QDPRP09417 244 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 LAP3P28838 519 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 B2MP61769 119 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 ROM1Q03395 351 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 DLX2Q07687 328 aaPredicted RBP11.26□□□□□ -0.61
VPS52-218ENST00000482399 FBXW12Q6X9E4 464 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 ZNF813Q6ZN06 617 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 RPS4Y2Q8TD47 263 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 MRPL24Q96A35 216 aaKnown RBP11.26□□□□□ -0.61
VPS52-218ENST00000482399 ADAM19Q9H013 955 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 FAM212BQ9NTI7 297 aaPredicted RBP11.26□□□□□ -0.61
VPS52-218ENST00000482399 DOCK8Q8NF50 2099 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 DOCK7Q96N67 2140 aa11.26□□□□□ -0.61
VPS52-218ENST00000482399 C9JQL5 133 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 MTCP1P56278 107 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 CLDN17P56750 224 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 RAB2AP61019 212 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 RSU1Q15404 277 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 C4orf17Q53FE4 359 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 OR8B12Q8NGG6 310 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 STT3BQ8TCJ2 826 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 ASB13Q8WXK3 278 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 SCARF2Q96GP6 870 aaPredicted RBP11.25□□□□□ -0.61
VPS52-218ENST00000482399 NKX2-4Q9H2Z4 354 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 GPR173Q9NS66 373 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 C1orf123Q9NWV4 160 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 RALGAPA1Q6GYQ0 2036 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 TICRRQ7Z2Z1 1910 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 TRBV11-1A0A0K0K1C0 115 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 PRR19A6NJB7 356 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 ALG1L2C9J202 215 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 SPRY1O43609 319 aaPredicted RBP11.25□□□□□ -0.61
VPS52-218ENST00000482399 IGHG1P01857 330 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 CSNK1EP49674 416 aaKnown RBP11.25□□□□□ -0.61
VPS52-218ENST00000482399 KIAA0141Q14154 515 aaPredicted RBP11.25□□□□□ -0.61
VPS52-218ENST00000482399 GUK1Q16774 197 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 SOHLH1Q5JUK2 328 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 PLXDC2Q6UX71 529 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 IL34Q6ZMJ4 242 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 APCDD1LQ8NCL9 501 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 TSTD1Q8NFU3 115 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 OR13G1Q8NGZ3 307 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 CHST11Q9NPF2 352 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 NUP210Q8TEM1 1887 aaPredicted RBP11.25□□□□□ -0.61
VPS52-218ENST00000482399 PIGPP57054 158 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 PCK2Q16822 640 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 C1QL2Q7Z5L3 287 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 HOGA1Q86XE5 327 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 GKN2Q86XP6 184 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 DTWD2Q8NBA8 298 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 SUMF2Q8NBJ7 301 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 SLC30A7Q8NEW0 376 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 ZNF519Q8TB69 540 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 GPHA2Q96T91 129 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 VN1R1Q9GZP7 353 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 FGF21Q9NSA1 209 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 OBP2AQ9NY56 170 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 LUZP4Q9P127 313 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 KIAA1549LQ6ZVL6 1849 aa11.25□□□□□ -0.61
VPS52-218ENST00000482399 A0A1W2PPE3 182 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms