RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 NDUFAF6Q330K2 333 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 COQ5Q5HYK3 327 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 UTF1Q5T230 341 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 IDNKQ5T6J7 187 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 HHATQ5VTY9 493 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 C1orf146Q5VVC0 180 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 UNQ9370/PRO34162Q6UXP9 181 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 ZNF497Q6ZNH5 498 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 Q6ZSR3 168 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 AHSA2Q719I0 299 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 HSD17B13Q7Z5P4 300 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 ZNF440Q8IYI8 595 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 PIANPQ8IYJ0 282 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 KIF2BQ8N4N8 673 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 CCDC71LQ8N9Z2 235 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 ZNF740Q8NDX6 193 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 TMEM161BQ8NDZ6 487 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 NOXO1Q8NFA2 376 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 OR8K1Q8NGG5 319 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 OR9G1Q8NH87 305 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 OR5AK3PQ8NH89 298 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 OR5K2Q8NHB8 316 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 DOK4Q8TEW6 326 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 TFGQ92734 400 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 MYDGFQ969H8 173 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 MARC2Q969Z3 335 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 ZNF689Q96CS4 500 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 CENPNQ96H22 339 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 SMIM10Q96HG1 83 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 CCDC42Q96M95 316 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 RANBP9Q96S59 729 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 CWH43Q9H720 699 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 ASB8Q9H765 288 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 PATZ1Q9HBE1 687 aaKnown RBP2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 C8orf4Q9NR00 106 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 EXD2Q9NVH0 621 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 C1orf109Q9NX04 203 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 VAPAQ9P0L0 249 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 ZNF581Q9P0T4 197 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 APOBEC3BQ9UH17 382 aaKnown RBP2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 RAB23Q9ULC3 237 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 SCML1Q9UN30 329 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 ING4Q9UNL4 249 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 PLXNA4Q9HCM2 1894 aa2.86□□□□□ -1.95
HMGB1P25-201ENST00000468402 MYO9BQ13459 2157 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 MTCL1Q9Y4B5 1905 aaKnown RBP2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 CHD5Q8TDI0 1954 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 SCN10AQ9Y5Y9 1956 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 IGHV3-35A0A0C4DH35 117 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 GLYATL1P3A0A0U1RQE8 302 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 A0A1B0GU03 582 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 FAM231BA6NCW3 169 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 LYRM9A8MSI8 78 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 F8VP50 259 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 H7C2Y5 167 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 I3L4J1 428 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 CDX4O14627 284 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 AGPAT2O15120 278 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 AQP9O43315 295 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 UTS2O95399 124 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 SNAP29O95721 258 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 LSM8O95777 96 aaKnown RBP2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 ASS1P00966 412 aaKnown RBP2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 HBE1P02100 147 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 SMIM10L2AP0DMW4 78 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 SMIM10L2BP0DMW5 78 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 UCHL3P15374 230 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 NQO1P15559 274 aaKnown RBP2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 PVALBP20472 110 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 MDH2P40926 338 aaKnown RBP2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 KIR2DS4P43632 304 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 CSNK1A1P48729 337 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 MARCKSL1P49006 195 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 SERPINB9P50453 376 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 SSR4P51571 173 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 XKP51811 444 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 SUB1P53999 127 aaKnown RBP eCLIP2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 CRISP1P54107 249 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 STXBP1P61764 594 aaKnown RBP2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 POLR2GP62487 172 aaKnown RBP eCLIP2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 ACVR1Q04771 509 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 SLAMF1Q13291 335 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 SNRNP35Q16560 246 aaKnown RBP2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 POU2AF1Q16633 256 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 TRMT5Q32P41 509 aaKnown RBP2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 RFX4Q33E94 735 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 HIGD2BQ4VC39 106 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 C14orf177Q52M58 125 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 PDZD11Q5EBL8 140 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 RBM48Q5RL73 367 aaKnown RBP2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 OGFRL1Q5TC84 451 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 DUPD1Q68J44 220 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 C11orf71Q6IPW1 123 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 FAHD1Q6P587 224 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 ZNF620Q6ZNG0 422 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 FAM220AQ7Z4H9 259 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 C17orf82Q86X59 251 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 CDC20BQ86Y33 519 aa2.85□□□□□ -1.95
HMGB1P25-201ENST00000468402 GPD1LQ8N335 351 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms