RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 FGF12P61328 243 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 UBA52P62987 128 aaKnown RBP8.45□□□□□ -1.06
SF3A3-204ENST00000462258 ROM1Q03395 351 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 MFGE8Q08431 387 aaPredicted RBP8.45□□□□□ -1.06
SF3A3-204ENST00000462258 MICBQ29980 383 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 TUSC1Q2TAM9 212 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 AADACL4Q5VUY2 407 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 CD276Q5ZPR3 534 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 ZNF322Q6U7Q0 402 aaPredicted RBP8.45□□□□□ -1.06
SF3A3-204ENST00000462258 C12orf54Q6X4T0 127 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 KCTD8Q6ZWB6 473 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 MEPCEQ7L2J0 689 aaKnown RBP8.45□□□□□ -1.06
SF3A3-204ENST00000462258 C11orf53Q8IXP5 236 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 SLC35F2Q8IXU6 374 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 ZNF679Q8IYX0 411 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 BCL6BQ8N143 479 aaPredicted RBP8.45□□□□□ -1.06
SF3A3-204ENST00000462258 GALNT4Q8N4A0 578 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 OR5P3Q8WZ94 311 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 PIGCQ92535 297 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 ZNF48Q96MX3 618 aaPredicted RBP8.45□□□□□ -1.06
SF3A3-204ENST00000462258 IL4I1Q96RQ9 567 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 MNTQ99583 582 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 GABARAPL3Q9BY60 117 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 FGF23Q9GZV9 251 aaPredicted RBP8.45□□□□□ -1.06
SF3A3-204ENST00000462258 MS4A7Q9GZW8 240 aaPredicted RBP8.45□□□□□ -1.06
SF3A3-204ENST00000462258 PBOV1Q9GZY1 135 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 RIBC2Q9H4K1 309 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 MOB1AQ9H8S9 216 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 ADGRL4Q9HBW9 690 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 H2AFY2Q9P0M6 372 aaPredicted RBP8.45□□□□□ -1.06
SF3A3-204ENST00000462258 NUFIP1Q9UHK0 495 aaKnown RBP8.45□□□□□ -1.06
SF3A3-204ENST00000462258 GTF2A1LQ9UNN4 478 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 A0A1B0GW55 424 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 ACOD1A6NK06 481 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 ZNF670-ZNF695F2Z2N8 137 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 DVL1O14640 695 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 TNFRSF13BO14836 293 aaPredicted RBP8.44□□□□□ -1.06
SF3A3-204ENST00000462258 IGLV3-1P01715 115 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 DUX4L2P0CJ85 424 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 DUX4L3P0CJ86 424 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 DUX4L4P0CJ87 422 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 DUX4L5P0CJ88 424 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 DUX4L6P0CJ89 424 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 DUX4L7P0CJ90 424 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 MUC1P15941 1255 aaPredicted RBP8.44□□□□□ -1.06
SF3A3-204ENST00000462258 CFHR2P36980 270 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 MAP2K3P46734 347 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 GMFBP60983 142 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 CXCR4P61073 352 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 POU4F2Q12837 409 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 WDR38Q5JTN6 314 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 DUX4L9Q6RFH8 374 aaPredicted RBP8.44□□□□□ -1.06
SF3A3-204ENST00000462258 PLEKHG7Q6ZR37 379 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 C9orf139Q6ZV77 190 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 ASRGL1Q7L266 308 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 FAM216BQ8N7L0 139 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 OR51G2Q8NGK0 314 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 OR51E1Q8TCB6 317 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 PYDC1Q8WXC3 89 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 ST8SIA4Q92187 359 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 RPL3LQ92901 407 aaKnown RBP8.44□□□□□ -1.06
SF3A3-204ENST00000462258 C12orf43Q96C57 262 aaKnown RBP8.44□□□□□ -1.06
SF3A3-204ENST00000462258 CENPNQ96H22 339 aaPredicted RBP8.44□□□□□ -1.06
SF3A3-204ENST00000462258 FAM71F1Q96KD3 344 aaPredicted RBP8.44□□□□□ -1.06
SF3A3-204ENST00000462258 PCGF1Q9BSM1 259 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 ZMAT3Q9HA38 289 aaKnown RBP8.44□□□□□ -1.06
SF3A3-204ENST00000462258 GPR84Q9NQS5 396 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 CLN6Q9NWW5 311 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 KAAG1Q9UBP8 84 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 DUX4Q9UBX2 424 aa8.44□□□□□ -1.06
SF3A3-204ENST00000462258 TMEM89A2RUT3 159 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 NKX6-3A6NJ46 265 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 ZNF879B4DU55 563 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 LOC110117498-PIK3R3F6TDL0 507 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 SRSF10O75494 262 aaKnown RBP8.43□□□□□ -1.06
SF3A3-204ENST00000462258 FCN3O75636 299 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 DHRS3O75911 302 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 TTRP02766 147 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 SFTPBP07988 381 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 ATP6V1B1P15313 513 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 FAHP16930 419 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 MTNR1AP48039 350 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 COMPP49747 757 aaPredicted RBP8.43□□□□□ -1.06
SF3A3-204ENST00000462258 GPM6AP51674 278 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 ELF3P78545 371 aaPredicted RBP8.43□□□□□ -1.06
SF3A3-204ENST00000462258 EFNB1P98172 346 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 EGR3Q06889 387 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 BAMBIQ13145 260 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 CEP78Q5JTW2 689 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 BCL2L15Q5TBC7 163 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 GPR157Q5UAW9 335 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 METTL11BQ5VVY1 283 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 PLCXD3Q63HM9 321 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 STUMQ69YW2 141 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 BRD3OSQ6XYD6 125 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 CCDC121Q6ZUS5 278 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 BTN2A1Q7KYR7 527 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 SLC36A1Q7Z2H8 476 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 THAP5Q7Z6K1 395 aa8.43□□□□□ -1.06
SF3A3-204ENST00000462258 PNLDC1Q8NA58 520 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms