RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 DOK3Q7L591 496 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 SATL1Q86VE3 508 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 COMMD2Q86X83 199 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 ZDHHC23Q8IYP9 409 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 SYS1Q8N2H4 156 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 KLHL36Q8N4N3 616 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 SEMA6DQ8NFY4 1073 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 OR51F2Q8NH61 342 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 OR51E1Q8TCB6 317 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 MSI2Q96DH6 328 aaKnown RBP9.99□□□□□ -0.81
VPS52-213ENST00000461743 ITPKCQ96DU7 683 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 MICU1Q9BPX6 476 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 RTL8AQ9BWD3 113 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 TLNRD1Q9H1K6 362 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 ENPP5Q9UJA9 477 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 GNG8Q9UK08 70 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 RAB26Q9ULW5 256 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 GTF2A1LQ9UNN4 478 aa9.99□□□□□ -0.81
VPS52-213ENST00000461743 SVEP1Q4LDE5 3571 aa9.98□□□□□ -0.81
VPS52-213ENST00000461743 LOC100289279A0A1B0GTE1 492 aa9.98□□□□□ -0.81
VPS52-213ENST00000461743 OR5B21A6NL26 309 aa9.98□□□□□ -0.81
VPS52-213ENST00000461743 FAM20BO75063 409 aa9.98□□□□□ -0.81
VPS52-213ENST00000461743 WBP4O75554 376 aaKnown RBP9.98□□□□□ -0.81
VPS52-213ENST00000461743 TNFAIP8O95379 198 aa9.98□□□□□ -0.81
VPS52-213ENST00000461743 PNPP00491 289 aa9.98□□□□□ -0.81
VPS52-213ENST00000461743 ZNF12P17014 697 aa9.98□□□□□ -0.81
VPS52-213ENST00000461743 IL2RGP31785 369 aa9.98□□□□□ -0.81
VPS52-213ENST00000461743 DVL1P1P54792 670 aaPredicted RBP9.98□□□□□ -0.81
VPS52-213ENST00000461743 AQP4P55087 323 aa9.98□□□□□ -0.81
VPS52-213ENST00000461743 LMO4P61968 165 aa9.98□□□□□ -0.81
VPS52-213ENST00000461743 PRDX4Q13162 271 aa9.98□□□□□ -0.81
VPS52-213ENST00000461743 GALEQ14376 348 aa9.98□□□□□ -0.81
VPS52-213ENST00000461743 KCNJ8Q15842 424 aa9.98□□□□□ -0.81
VPS52-213ENST00000461743 FDX2Q6P4F2 183 aa9.98□□□□□ -0.81
VPS52-213ENST00000461743 THAP5Q7Z6K1 395 aa9.98□□□□□ -0.81
VPS52-213ENST00000461743 GLCCI1Q86VQ1 547 aa9.98□□□□□ -0.81
VPS52-213ENST00000461743 LRRC28Q86X40 367 aaPredicted RBP9.98□□□□□ -0.81
VPS52-213ENST00000461743 CROCCP3Q8IVE0 287 aa9.98□□□□□ -0.81
VPS52-213ENST00000461743 C8orf59Q8N0T1 100 aaPredicted RBP9.98□□□□□ -0.81
VPS52-213ENST00000461743 ZNF420Q8TAQ5 688 aaPredicted RBP9.98□□□□□ -0.81
VPS52-213ENST00000461743 RORBQ92753 470 aa9.98□□□□□ -0.81
VPS52-213ENST00000461743 C10orf35Q96D05 121 aa9.98□□□□□ -0.81
VPS52-213ENST00000461743 TECTBQ96PL2 329 aa9.98□□□□□ -0.81
VPS52-213ENST00000461743 ALG8Q9BVK2 526 aa9.98□□□□□ -0.81
VPS52-213ENST00000461743 FGF20Q9NP95 211 aaPredicted RBP9.98□□□□□ -0.81
VPS52-213ENST00000461743 ACOXLQ9NUZ1 547 aa9.98□□□□□ -0.81
VPS52-213ENST00000461743 RNF7Q9UBF6 113 aa9.98□□□□□ -0.81
VPS52-213ENST00000461743 RHBDD3Q9Y3P4 386 aa9.98□□□□□ -0.81
VPS52-213ENST00000461743 V9GYS6 101 aa9.98□□□□□ -0.81
VPS52-213ENST00000461743 TRAV20A0A0B4J274 112 aa9.97□□□□□ -0.81
VPS52-213ENST00000461743 A0A1B0GVI7 797 aa9.97□□□□□ -0.81
VPS52-213ENST00000461743 A8MXK9 166 aa9.97□□□□□ -0.81
VPS52-213ENST00000461743 F5H0A9 414 aaPredicted RBP9.97□□□□□ -0.81
VPS52-213ENST00000461743 WNT9BO14905 357 aa9.97□□□□□ -0.81
VPS52-213ENST00000461743 LMX1BO60663 402 aa9.97□□□□□ -0.81
VPS52-213ENST00000461743 ATP6V1G1O75348 118 aa9.97□□□□□ -0.81
VPS52-213ENST00000461743 RPP14O95059 124 aaKnown RBP9.97□□□□□ -0.81
VPS52-213ENST00000461743 MSMBP08118 114 aa9.97□□□□□ -0.81
VPS52-213ENST00000461743 PIPP12273 146 aaPredicted RBP9.97□□□□□ -0.81
VPS52-213ENST00000461743 HNF1AP20823 631 aa9.97□□□□□ -0.81
VPS52-213ENST00000461743 DCKP27707 260 aa9.97□□□□□ -0.81
VPS52-213ENST00000461743 CCR9P51686 369 aa9.97□□□□□ -0.81
VPS52-213ENST00000461743 ZMYND11Q15326 602 aa9.97□□□□□ -0.81
VPS52-213ENST00000461743 ZNF404Q494X3 552 aa9.97□□□□□ -0.81
VPS52-213ENST00000461743 PRAMEF6Q5VXH4 476 aa9.97□□□□□ -0.81
VPS52-213ENST00000461743 ZBTB8BQ8NAP8 495 aaPredicted RBP9.97□□□□□ -0.81
VPS52-213ENST00000461743 OR1M1Q8NGA1 313 aa9.97□□□□□ -0.81
VPS52-213ENST00000461743 OR5P3Q8WZ94 311 aa9.97□□□□□ -0.81
VPS52-213ENST00000461743 DVL3Q92997 716 aaPredicted RBP9.97□□□□□ -0.81
VPS52-213ENST00000461743 FAM71F1Q96KD3 344 aaPredicted RBP9.97□□□□□ -0.81
VPS52-213ENST00000461743 SOX7Q9BT81 388 aa9.97□□□□□ -0.81
VPS52-213ENST00000461743 NARFLQ9H6Q4 476 aa9.97□□□□□ -0.81
VPS52-213ENST00000461743 PATZ1Q9HBE1 687 aaKnown RBP9.97□□□□□ -0.81
VPS52-213ENST00000461743 YAE1D1Q9NRH1 226 aa9.97□□□□□ -0.81
VPS52-213ENST00000461743 DCAF16Q9NXF7 216 aa9.97□□□□□ -0.81
VPS52-213ENST00000461743 TREM2Q9NZC2 230 aa9.97□□□□□ -0.81
VPS52-213ENST00000461743 CDC42EP3Q9UKI2 254 aa9.97□□□□□ -0.81
VPS52-213ENST00000461743 SLC22A13Q9Y226 551 aa9.97□□□□□ -0.81
VPS52-213ENST00000461743 PIGLQ9Y2B2 252 aa9.97□□□□□ -0.81
VPS52-213ENST00000461743 ARHGAP32A7KAX9 2087 aa9.97□□□□□ -0.81
VPS52-213ENST00000461743 PPIAL4EA0A075B759 164 aa9.96□□□□□ -0.82
VPS52-213ENST00000461743 PPIAL4CA0A0B4J2A2 164 aa9.96□□□□□ -0.82
VPS52-213ENST00000461743 A0A1B0GTI1 187 aa9.96□□□□□ -0.82
VPS52-213ENST00000461743 A6NLC8 198 aa9.96□□□□□ -0.82
VPS52-213ENST00000461743 INAFM1C9JVW0 142 aa9.96□□□□□ -0.82
VPS52-213ENST00000461743 PPIAL4DF5H284 164 aa9.96□□□□□ -0.82
VPS52-213ENST00000461743 MAGEB4O15481 346 aaPredicted RBP9.96□□□□□ -0.82
VPS52-213ENST00000461743 CYB5R3P00387 301 aaPredicted RBP9.96□□□□□ -0.82
VPS52-213ENST00000461743 TGFAP01135 160 aa9.96□□□□□ -0.82
VPS52-213ENST00000461743 ISG15P05161 165 aa9.96□□□□□ -0.82
VPS52-213ENST00000461743 HTR1AP08908 422 aa9.96□□□□□ -0.82
VPS52-213ENST00000461743 PPIAL4FP0DN26 164 aa9.96□□□□□ -0.82
VPS52-213ENST00000461743 GATA3P23771 443 aa9.96□□□□□ -0.82
VPS52-213ENST00000461743 CFHR2P36980 270 aa9.96□□□□□ -0.82
VPS52-213ENST00000461743 ZNF154Q13106 437 aa9.96□□□□□ -0.82
VPS52-213ENST00000461743 MPPED2Q15777 294 aa9.96□□□□□ -0.82
VPS52-213ENST00000461743 CEACAM21Q3KPI0 293 aa9.96□□□□□ -0.82
VPS52-213ENST00000461743 TP53I3Q53FA7 332 aa9.96□□□□□ -0.82
VPS52-213ENST00000461743 FAM76BQ5HYJ3 339 aa9.96□□□□□ -0.82
VPS52-213ENST00000461743 WDR38Q5JTN6 314 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms