RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	PIGL	Q9Y2B2	252 aa		10.68	□□□□□ -0.7
FDPS-204	ENST00000461507	RPL36	Q9Y3U8	105 aa	Known RBP	10.68	□□□□□ -0.7
FDPS-204	ENST00000461507	ARHGAP32	A7KAX9	2087 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	PPIAL4E	A0A075B759	164 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	PPIAL4C	A0A0B4J2A2	164 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507		A0A0U1RQV5	110 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	ZNF816-ZNF321P	A0A0X1KG74	233 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	PPIAL4D	F5H284	164 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	TMEM178B	H3BS89	294 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	IFNL4	K9M1U5	179 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	CASQ2	O14958	399 aa	Predicted RBP	10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	AVP	P01185	164 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	TTR	P02766	147 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	PPIAL4F	P0DN26	164 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	FAH	P16930	419 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	GABRB1	P18505	474 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	GATA3	P23771	443 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	ACKR3	P25106	362 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	CD80	P33681	288 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	CAPG	P40121	348 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	ACTA2	P62736	377 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	ACTG2	P63267	376 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	RIPPLY1	Q0D2K3	151 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	OR8B8	Q15620	311 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	MPPED2	Q15777	294 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	SMN1	Q16637	294 aa	Known RBP	10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	TUSC1	Q2TAM9	212 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	CEP78	Q5JTW2	689 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	SLC25A30	Q5SVS4	291 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	FAM201A	Q5SY85	155 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	PLCXD3	Q63HM9	321 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	MOB3C	Q70IA8	216 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	LHFPL3	Q86UP9	236 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	KLB	Q86Z14	1044 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	ZDHHC23	Q8IYP9	409 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	C8orf59	Q8N0T1	100 aa	Predicted RBP	10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	MUC20	Q8N307	709 aa	Predicted RBP	10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	DEFB108B	Q8NET1	73 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	C4orf36	Q96KX1	117 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	MYCBP	Q99417	103 aa	Predicted RBP	10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	ALG8	Q9BVK2	526 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	PPP1R3E	Q9H7J1	279 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	RNPEPL1	Q9HAU8	725 aa		10.67	□□□□□ -0.7
FDPS-204	ENST00000461507	TENM1	Q9UKZ4	2725 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507		A6NIN4	97 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	C3orf80	F5H4A9	247 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	DLGAP1	O14490	977 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	SYT7	O43581	403 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	SULT1C4	O75897	302 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	DHRS3	O75911	302 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	IGHV2-70	P01814	119 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	HTR1A	P08908	422 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	RPS2	P15880	293 aa	Known RBP	10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	EPHA1	P21709	976 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	MDH2	P40926	338 aa	Known RBP	10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	OR12D2	P58182	307 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	HILS1	P60008	231 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	CSNK2B	P67870	215 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	ZMYND11	Q15326	602 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	KLHL22	Q53GT1	634 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	DMRTC1	Q5HYR2	192 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	SFRP4	Q6FHJ7	346 aa	Predicted RBP	10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	ZNF826P	Q6ZT77	177 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	ELMOD2	Q8IZ81	293 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	CELF2-AS1	Q8N7Q2	184 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	APH1B	Q8WW43	257 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	RNF170	Q96K19	258 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	VCX3B	Q9H321	246 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	ABCB9	Q9NP78	766 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	RNF7	Q9UBF6	113 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	ENPP5	Q9UJA9	477 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	MYRF	Q9Y2G1	1151 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	PPIAL4A	Q9Y536	164 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	MPC1	Q9Y5U8	109 aa		10.66	□□□□□ -0.7
FDPS-204	ENST00000461507	LOC105371242	A0A075B767	164 aa		10.65	□□□□□ -0.7
FDPS-204	ENST00000461507		A8MXK9	166 aa		10.65	□□□□□ -0.7
FDPS-204	ENST00000461507		E9PQ18	207 aa		10.65	□□□□□ -0.7
FDPS-204	ENST00000461507	SRSF10	O75494	262 aa	Known RBP	10.65	□□□□□ -0.7
FDPS-204	ENST00000461507	MYL12A	P19105	171 aa		10.65	□□□□□ -0.7
FDPS-204	ENST00000461507	PMEL	P40967	661 aa		10.65	□□□□□ -0.7
FDPS-204	ENST00000461507	COMP	P49747	757 aa	Predicted RBP	10.65	□□□□□ -0.7
FDPS-204	ENST00000461507	GPM6A	P51674	278 aa		10.65	□□□□□ -0.7
FDPS-204	ENST00000461507	LCN2	P80188	198 aa		10.65	□□□□□ -0.7
FDPS-204	ENST00000461507	HOXA4	Q00056	320 aa	Predicted RBP	10.65	□□□□□ -0.7
FDPS-204	ENST00000461507	RAB40B	Q12829	278 aa		10.65	□□□□□ -0.7
FDPS-204	ENST00000461507	TMEM155	Q4W5P6	130 aa		10.65	□□□□□ -0.7
FDPS-204	ENST00000461507	WDR38	Q5JTN6	314 aa		10.65	□□□□□ -0.7
FDPS-204	ENST00000461507	ZNF684	Q5T5D7	378 aa		10.65	□□□□□ -0.7
FDPS-204	ENST00000461507	FAHD2B	Q6P2I3	314 aa	Predicted RBP	10.65	□□□□□ -0.7
FDPS-204	ENST00000461507	DOK3	Q7L591	496 aa		10.65	□□□□□ -0.7
FDPS-204	ENST00000461507	CATSPERD	Q86XM0	798 aa		10.65	□□□□□ -0.7
FDPS-204	ENST00000461507	OR52I1	Q8NGK6	324 aa		10.65	□□□□□ -0.7
FDPS-204	ENST00000461507	ZNF418	Q8TF45	676 aa	Predicted RBP	10.65	□□□□□ -0.7
FDPS-204	ENST00000461507	LRRC29	Q8WV35	223 aa		10.65	□□□□□ -0.7
FDPS-204	ENST00000461507	RORB	Q92753	470 aa		10.65	□□□□□ -0.7
FDPS-204	ENST00000461507	ERGIC1	Q969X5	290 aa		10.65	□□□□□ -0.7
FDPS-204	ENST00000461507	FAHD2A	Q96GK7	314 aa		10.65	□□□□□ -0.7
FDPS-204	ENST00000461507	OCEL1	Q9H607	264 aa		10.65	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 56 ms