RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 MRPL27Q9P0M9 148 aaKnown RBP4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 P2RX2Q9UBL9 471 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 PEMTQ9UBM1 199 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 ZNF107Q9UII5 783 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 SH2B3Q9UQQ2 575 aa4.13□□□□□ -1.75
HMGB3P9-201ENST00000441799 A0A1B0GUL6 1792 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 ECM29Q5VYK3 1845 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 A0A087WX48 190 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 TRBV4-1A0A0J9YWV2 114 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 A0A0J9YY10 115 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 A0A1B0GX78 115 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 TVP23AA6NH52 213 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 CLDN24A6NM45 220 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 YJEFN3A6XGL0 299 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 IFNL4K9M1U5 179 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 F2RL2O00254 374 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 SLC16A7O60669 478 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 ENTPD6O75354 484 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 GABARAPO95166 117 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 GCGP01275 180 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 GAPDHP04406 335 aaKnown RBP4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 IFNW1P05000 195 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 ALDOBP05062 364 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 UMODP07911 640 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 UBBP0CG47 229 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 PRSS56P0CW18 603 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 ZNF43P17038 809 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 GGT1P19440 569 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 RPS12P25398 132 aaKnown RBP4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 CHRNB4P30926 498 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 RPL4P36578 427 aaKnown RBP4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 MDH2P40926 338 aaKnown RBP4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 RPL21P46778 160 aaKnown RBP4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 CTSCP53634 463 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 CLDN12P56749 244 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 LILRA4P59901 499 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 SNRPD2P62316 118 aaKnown RBP4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 KLRC3Q07444 240 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 NME3Q13232 169 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 GPR18Q14330 331 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 MAD2L1BPQ15013 274 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 RHEBQ15382 184 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 TCTN1Q2MV58 587 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 LINC01620Q4KN68 170 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 SYTL3Q4VX76 610 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 UNC50Q53HI1 259 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 TMEM97Q5BJF2 176 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 PRSS54Q6PEW0 395 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 LINC00336Q6ZUF6 198 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 FA2HQ7L5A8 372 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 PARGQ86W56 976 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 TMPRSS12Q86WS5 348 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 FGFRL1Q8N441 504 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 OR10Q1Q8NGQ4 319 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 OR6K2Q8NGY2 324 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 LYPD6BQ8NI32 183 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 THAP6Q8TBB0 222 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 ZNF431Q8TF32 576 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 C10orf82Q8WW14 230 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 FAM3CQ92520 227 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 ARL11Q969Q4 196 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 APOBEC3DQ96AK3 386 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 PYCR2Q96C36 320 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 GPR146Q96CH1 333 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 ORAI1Q96D31 301 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 SLC35E1Q96K37 410 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 KCTD7Q96MP8 289 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 OR2M4Q96R27 311 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 CSF3RQ99062 836 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 VN1R1Q9GZP7 353 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 SRMSQ9H3Y6 488 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 SLC17A5Q9NRA2 495 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 FBXO6Q9NRD1 293 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 SMCO4Q9NRQ5 59 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 SPANXB1Q9NS25 103 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 RLIMQ9NVW2 624 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 SPANXCQ9NY87 97 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 OPTCQ9UBM4 332 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 NUFIP1Q9UHK0 495 aaKnown RBP4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 HSPB8Q9UJY1 196 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 PILRBQ9UKJ0 227 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 A4GNTQ9UNA3 340 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 DHDHQ9UQ10 334 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 C14orf166Q9Y224 244 aaKnown RBP4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 DDX60Q8IY21 1712 aaKnown RBP4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 ARAP2Q8WZ64 1704 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 ANKRD36CQ5JPF3 1778 aa4.12□□□□□ -1.75
HMGB3P9-201ENST00000441799 TP53BP1Q12888 1972 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P9-201ENST00000441799 IGHV2OR16-5A0A0B4J2B6 119 aa4.11□□□□□ -1.75
HMGB3P9-201ENST00000441799 GLYATL1P3A0A0U1RQE8 302 aa4.11□□□□□ -1.75
HMGB3P9-201ENST00000441799 KIR2DS1A0A191URI9 304 aa4.11□□□□□ -1.75
HMGB3P9-201ENST00000441799 LOC102723971A0A1B0GUV8 181 aa4.11□□□□□ -1.75
HMGB3P9-201ENST00000441799 DNAJC9-AS1A6NH13 148 aa4.11□□□□□ -1.75
HMGB3P9-201ENST00000441799 LRRC3CA6NJW4 275 aa4.11□□□□□ -1.75
HMGB3P9-201ENST00000441799 SLC22A20A6NK97 555 aa4.11□□□□□ -1.75
HMGB3P9-201ENST00000441799 AQP7P3A6NL99 342 aa4.11□□□□□ -1.75
HMGB3P9-201ENST00000441799 IFITM10A6NMD0 228 aa4.11□□□□□ -1.75
HMGB3P9-201ENST00000441799 DHRS7CA6NNS2 312 aa4.11□□□□□ -1.75
HMGB3P9-201ENST00000441799 E5RGE8 158 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 851.4 ms