RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 CLPXO76031 633 aa17.07■□□□□ 0.32
CPNE1-219ENST00000440240 FBP1P09467 338 aa17.07■□□□□ 0.32
CPNE1-219ENST00000440240 DUX4L2P0CJ85 424 aa17.07■□□□□ 0.32
CPNE1-219ENST00000440240 DUX4L3P0CJ86 424 aa17.07■□□□□ 0.32
CPNE1-219ENST00000440240 DUX4L4P0CJ87 422 aa17.07■□□□□ 0.32
CPNE1-219ENST00000440240 DUX4L5P0CJ88 424 aa17.07■□□□□ 0.32
CPNE1-219ENST00000440240 DUX4L6P0CJ89 424 aa17.07■□□□□ 0.32
CPNE1-219ENST00000440240 DUX4L7P0CJ90 424 aa17.07■□□□□ 0.32
CPNE1-219ENST00000440240 EEF1B2P24534 225 aaKnown RBP17.07■□□□□ 0.32
CPNE1-219ENST00000440240 DUX4L9Q6RFH8 374 aaPredicted RBP17.07■□□□□ 0.32
CPNE1-219ENST00000440240 TIGD4Q8IY51 512 aa17.07■□□□□ 0.32
CPNE1-219ENST00000440240 FAM216BQ8N7L0 139 aa17.07■□□□□ 0.32
CPNE1-219ENST00000440240 ZNF454Q8N9F8 522 aa17.07■□□□□ 0.32
CPNE1-219ENST00000440240 ZSCAN4Q8NAM6 433 aaPredicted RBP17.07■□□□□ 0.32
CPNE1-219ENST00000440240 OR10G2Q8NGC3 310 aa17.07■□□□□ 0.32
CPNE1-219ENST00000440240 MED30Q96HR3 178 aa17.07■□□□□ 0.32
CPNE1-219ENST00000440240 MMP27Q9H306 513 aa17.07■□□□□ 0.32
CPNE1-219ENST00000440240 PPP1R3EQ9H7J1 279 aa17.07■□□□□ 0.32
CPNE1-219ENST00000440240 DNAJB11Q9UBS4 358 aa17.07■□□□□ 0.32
CPNE1-219ENST00000440240 DUX4Q9UBX2 424 aa17.07■□□□□ 0.32
CPNE1-219ENST00000440240 BTBD17A6NE02 478 aa17.06■□□□□ 0.32
CPNE1-219ENST00000440240 TMEM210A6NLX4 147 aa17.06■□□□□ 0.32
CPNE1-219ENST00000440240 H3BN98 237 aa17.06■□□□□ 0.32
CPNE1-219ENST00000440240 GNGT1P63211 74 aa17.06■□□□□ 0.32
CPNE1-219ENST00000440240 ELF3P78545 371 aaPredicted RBP17.06■□□□□ 0.32
CPNE1-219ENST00000440240 IKZF1Q13422 519 aa17.06■□□□□ 0.32
CPNE1-219ENST00000440240 STUMQ69YW2 141 aa17.06■□□□□ 0.32
CPNE1-219ENST00000440240 C1orf122Q6ZSJ8 110 aa17.06■□□□□ 0.32
CPNE1-219ENST00000440240 FGFRL1Q8N441 504 aa17.06■□□□□ 0.32
CPNE1-219ENST00000440240 OR5T2Q8NGG2 359 aa17.06■□□□□ 0.32
CPNE1-219ENST00000440240 OTOSQ8NHW6 89 aa17.06■□□□□ 0.32
CPNE1-219ENST00000440240 SEH1LQ96EE3 360 aa17.06■□□□□ 0.32
CPNE1-219ENST00000440240 AMELYQ99218 206 aa17.06■□□□□ 0.32
CPNE1-219ENST00000440240 FEVQ99581 238 aa17.06■□□□□ 0.32
CPNE1-219ENST00000440240 NIPSNAP1Q9BPW8 284 aa17.06■□□□□ 0.32
CPNE1-219ENST00000440240 DCTN5Q9BTE1 182 aa17.06■□□□□ 0.32
CPNE1-219ENST00000440240 OR51V1Q9H2C8 321 aa17.06■□□□□ 0.32
CPNE1-219ENST00000440240 ZNF391Q9UJN7 358 aa17.06■□□□□ 0.32
CPNE1-219ENST00000440240 CST4P01036 141 aa17.05■□□□□ 0.32
CPNE1-219ENST00000440240 LYNP07948 512 aa17.05■□□□□ 0.32
CPNE1-219ENST00000440240 AMY2BP19961 511 aa17.05■□□□□ 0.32
CPNE1-219ENST00000440240 PROK1P58294 105 aa17.05■□□□□ 0.32
CPNE1-219ENST00000440240 MS4A2Q01362 244 aa17.05■□□□□ 0.32
CPNE1-219ENST00000440240 TAF9Q16594 264 aa17.05■□□□□ 0.32
CPNE1-219ENST00000440240 FAM76BQ5HYJ3 339 aa17.05■□□□□ 0.32
CPNE1-219ENST00000440240 C8orf46Q8TAG6 207 aa17.05■□□□□ 0.32
CPNE1-219ENST00000440240 GIPC3Q8TF64 312 aa17.05■□□□□ 0.32
CPNE1-219ENST00000440240 THEM6Q8WUY1 208 aa17.05■□□□□ 0.32
CPNE1-219ENST00000440240 OR5P3Q8WZ94 311 aa17.05■□□□□ 0.32
CPNE1-219ENST00000440240 NSL1Q96IY1 281 aa17.05■□□□□ 0.32
CPNE1-219ENST00000440240 HIST1H2AAQ96QV6 131 aa17.05■□□□□ 0.32
CPNE1-219ENST00000440240 SIRT7Q9NRC8 400 aa17.05■□□□□ 0.32
CPNE1-219ENST00000440240 ARRDC5A6NEK1 342 aa17.04■□□□□ 0.32
CPNE1-219ENST00000440240 NKX6-3A6NJ46 265 aa17.04■□□□□ 0.32
CPNE1-219ENST00000440240 ZNF850A8MQ14 1090 aa17.04■□□□□ 0.32
CPNE1-219ENST00000440240 PRR23D1E9PI22 279 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-219ENST00000440240 PRR23D2P0DMB1 279 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-219ENST00000440240 RAP2AP10114 183 aa17.04■□□□□ 0.32
CPNE1-219ENST00000440240 KRTAP10-3P60369 221 aa17.04■□□□□ 0.32
CPNE1-219ENST00000440240 PRDX4Q13162 271 aa17.04■□□□□ 0.32
CPNE1-219ENST00000440240 ASPHD2Q6ICH7 369 aa17.04■□□□□ 0.32
CPNE1-219ENST00000440240 ZNF788Q6ZQV5 615 aa17.04■□□□□ 0.32
CPNE1-219ENST00000440240 KCTD8Q6ZWB6 473 aa17.04■□□□□ 0.32
CPNE1-219ENST00000440240 IQCF1Q8N6M8 205 aa17.04■□□□□ 0.32
CPNE1-219ENST00000440240 H1FXQ92522 213 aaKnown RBP17.04■□□□□ 0.32
CPNE1-219ENST00000440240 PIGCQ92535 297 aa17.04■□□□□ 0.32
CPNE1-219ENST00000440240 RPL3LQ92901 407 aaKnown RBP17.04■□□□□ 0.32
CPNE1-219ENST00000440240 RNF170Q96K19 258 aa17.04■□□□□ 0.32
CPNE1-219ENST00000440240 RAB3IPQ96QF0 476 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-219ENST00000440240 PKP2Q99959 881 aa17.04■□□□□ 0.32
CPNE1-219ENST00000440240 RBM4BQ9BQ04 359 aaKnown RBP17.04■□□□□ 0.32
CPNE1-219ENST00000440240 C16orf95Q9H693 158 aa17.04■□□□□ 0.32
CPNE1-219ENST00000440240 NIPAL2Q9H841 368 aa17.04■□□□□ 0.32
CPNE1-219ENST00000440240 RNASEK-C17orf49H0YIS7 233 aa17.03■□□□□ 0.32
CPNE1-219ENST00000440240 NPFFO15130 113 aa17.03■□□□□ 0.32
CPNE1-219ENST00000440240 CST1P01037 141 aa17.03■□□□□ 0.32
CPNE1-219ENST00000440240 HMGN1P05114 100 aa17.03■□□□□ 0.32
CPNE1-219ENST00000440240 GMFBP60983 142 aa17.03■□□□□ 0.32
CPNE1-219ENST00000440240 PLBD1Q6P4A8 553 aa17.03■□□□□ 0.32
CPNE1-219ENST00000440240 Q8N7P7 452 aa17.03■□□□□ 0.32
CPNE1-219ENST00000440240 PAPD5Q8NDF8 572 aaKnown RBP17.03■□□□□ 0.32
CPNE1-219ENST00000440240 UBE2FQ969M7 185 aa17.03■□□□□ 0.32
CPNE1-219ENST00000440240 ITFG2Q969R8 447 aa17.03■□□□□ 0.32
CPNE1-219ENST00000440240 LRGUKQ96M69 825 aa17.03■□□□□ 0.32
CPNE1-219ENST00000440240 WDR13Q9H1Z4 485 aa17.03■□□□□ 0.32
CPNE1-219ENST00000440240 TCF7L1Q9HCS4 588 aa17.03■□□□□ 0.32
CPNE1-219ENST00000440240 SNTG1Q9NSN8 517 aa17.03■□□□□ 0.32
CPNE1-219ENST00000440240 ZNRD1Q9P1U0 126 aa17.03■□□□□ 0.32
CPNE1-219ENST00000440240 VPREB3Q9UKI3 123 aa17.03■□□□□ 0.32
CPNE1-219ENST00000440240 PRODHO43272 600 aa17.02■□□□□ 0.32
CPNE1-219ENST00000440240 PAHP00439 452 aa17.02■□□□□ 0.32
CPNE1-219ENST00000440240 ACKR3P25106 362 aa17.02■□□□□ 0.32
CPNE1-219ENST00000440240 POU1F1P28069 291 aa17.02■□□□□ 0.32
CPNE1-219ENST00000440240 TGFBR2P37173 567 aa17.02■□□□□ 0.32
CPNE1-219ENST00000440240 BLMHQ13867 455 aa17.02■□□□□ 0.32
CPNE1-219ENST00000440240 GINS1Q14691 196 aa17.02■□□□□ 0.32
CPNE1-219ENST00000440240 NCR3LG1Q68D85 454 aa17.02■□□□□ 0.32
CPNE1-219ENST00000440240 DHRS7BQ6IAN0 325 aaPredicted RBP17.02■□□□□ 0.32
CPNE1-219ENST00000440240 Q6ZSV7 163 aa17.02■□□□□ 0.32
CPNE1-219ENST00000440240 ANGPTL6Q8NI99 470 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms