RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 TMEM14AQ9Y6G1 99 aa2.16□□□□□ -2.06
HMGB1P49-201ENST00000418882 ADCY9O60503 1353 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 IGLV1-36A0A0B4J1U3 117 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 A0A0B4J2A0 478 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 C1orf232A0A0U1RR37 186 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 PRAMEF26H0Y7S4 382 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 COCHO43405 550 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 GCM2O75603 506 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 TRAPPC6AO75865 159 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 FADS2O95864 444 aaKnown RBP2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 ARG1P05089 322 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 PGA4P0DJD7 388 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 PGA3P0DJD8 388 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 HLA-GP17693 338 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 KIR3DL2P43630 455 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 HAAOP46952 286 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 UGT2B15P54855 530 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 MLF1P58340 268 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 SLC35B1P78383 322 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 SEMG2Q02383 582 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 DYNC1I2Q13409 638 aaKnown RBP2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 ATP6V1FQ16864 119 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 PTPN20Q4JDL3 420 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 EPGNQ6UW88 154 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 ABHD13Q7L211 337 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 SETD3Q86TU7 594 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 LRRC52Q8N7C0 313 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 OR6N2Q8NGY6 317 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 OR51A7Q8NH64 312 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 OR5P2Q8WZ92 322 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 CREB3L1Q96BA8 519 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 TM4SF18Q96CE8 201 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 P2RX4Q99571 388 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 RNF5Q99942 180 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 MED10Q9BTT4 135 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 SAV1Q9H4B6 383 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 HMG20AQ9NP66 347 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 KCNJ16Q9NPI9 418 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 TMEM9BQ9NQ34 198 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 SAMSN1Q9NSI8 373 aaKnown RBP2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 SHPKQ9UHJ6 478 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 UBIAD1Q9Y5Z9 338 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 ADAMTS13Q76LX8 1427 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 CAMTA1Q9Y6Y1 1673 aa2.15□□□□□ -2.07
HMGB1P49-201ENST00000418882 COL5A1P20908 1838 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 TRAV8-7A0A075B6U6 113 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 LYRM9A8MSI8 78 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 HACD1B0YJ81 288 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 H7C1H1 209 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 hCG_2039718K7EN88 272 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 RAD51CO43502 376 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 SGCEO43556 437 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 AIFM1O95831 613 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 PGA5P0DJD9 388 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 LIPCP11150 499 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 USF1P22415 310 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 CDC34P49427 236 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 RAB7AP51149 207 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 FABP6P51161 128 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 RPL31P62899 125 aaKnown RBP2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 IFFO1Q0D2I5 559 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 ITGB3BPQ13352 177 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 RGNQ15493 299 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 OR7A5Q15622 319 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 EXOC3L4Q17RC7 722 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 FAM78AQ5JUQ0 283 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 SAXO2Q658L1 398 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 DUPD1Q68J44 220 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 WDR82Q6UXN9 313 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 TEX43Q6ZNM6 134 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 HORMAD1Q86X24 394 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 KRTAP13-1Q8IUC0 172 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 SLC7A5P1Q8MH63 180 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 ABHD3Q8WU67 409 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 ZNF488Q96MN9 340 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 SCGB3A2Q96PL1 93 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 GABRG3Q99928 467 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 SLC25A2Q9BXI2 301 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 HDHD2Q9H0R4 259 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 SLC38A1Q9H2H9 487 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 ARMC7Q9H6L4 198 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 MCUBQ9NWR8 336 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 KLF12Q9Y4X4 402 aa2.14□□□□□ -2.07
HMGB1P49-201ENST00000418882 IGLV3-12A0A075B6K2 115 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 A0A0B4J2E0 115 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 SLC16A7O60669 478 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 ALOX12BO75342 701 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 SLC25A14O95258 325 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 LDOC1O95751 146 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 PTTG1O95997 202 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 GCGP01275 180 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 HLA-DPB1P04440 258 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 PSMB5P28074 263 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 LOXP28300 417 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 GNRHRP30968 328 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 KDELR2P33947 212 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 CEACAM6P40199 344 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 MAGEA3P43357 314 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 HCCSP53701 268 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 ZNF816Q0VGE8 651 aaPredicted RBP2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms