RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 AUP1Q9Y679 476 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 R4GMQ9 66 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 HSPE1-MOB4S4R3N1 261 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 ZANQ9Y493 2812 aa5.36□□□□□ -1.55
USP54-202ENST00000413442 NF1P21359 2839 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 LOC105371242A0A075B767 164 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 LOC100130705A0A1B0GUX0 176 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 A0A1W2PPH5 198 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 A6NLC8 198 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 CEACAM18A8MTB9 384 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 SRRM5B3KS81 715 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 H3BNX3 289 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 TRIM77I1YAP6 450 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 P2RY10O00398 339 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 WNT9BO14905 357 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 ENSAO43768 121 aaKnown RBP5.35□□□□□ -1.55
USP54-202ENST00000413442 FAM20BO75063 409 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 SRSF10O75494 262 aaKnown RBP5.35□□□□□ -1.55
USP54-202ENST00000413442 GATBO75879 557 aaKnown RBP5.35□□□□□ -1.55
USP54-202ENST00000413442 ALX3O95076 343 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 NRASP01111 189 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 HLA-DPB1P04440 258 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 GRPP07492 148 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 UBCP0CG48 685 aaKnown RBP5.35□□□□□ -1.55
USP54-202ENST00000413442 CCL1P22362 96 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 PMELP40967 661 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 PITPNBP48739 271 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 RAB40BQ12829 278 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 ZNF154Q13106 437 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 PRDX4Q13162 271 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 PDCD1Q15116 288 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 CLVS2Q5SYC1 327 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 ZNF684Q5T5D7 378 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 BCL2L15Q5TBC7 163 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 WDR25Q64LD2 544 aaPredicted RBP5.35□□□□□ -1.55
USP54-202ENST00000413442 TMEM42Q69YG0 159 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 LYPD4Q6UWN0 246 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 RBMS3Q6XE24 437 aaKnown RBP5.35□□□□□ -1.55
USP54-202ENST00000413442 C9orf139Q6ZV77 190 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 FAM220AQ7Z4H9 259 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 CALHM1Q8IU99 346 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 Q8IYB0 196 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 ZDHHC23Q8IYP9 409 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 GCSAMQ8N6F7 178 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 YIPF7Q8N8F6 280 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 SETD9Q8NE22 299 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 DNAAF1Q8NEP3 725 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 OR10AD1Q8NGE0 317 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 OR8B12Q8NGG6 310 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 OR2AE1Q8NHA4 323 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 ZNF420Q8TAQ5 688 aaPredicted RBP5.35□□□□□ -1.55
USP54-202ENST00000413442 PIGCQ92535 297 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 GTF3AQ92664 365 aaKnown RBP5.35□□□□□ -1.55
USP54-202ENST00000413442 UPRTQ96BW1 309 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 PKP2Q99959 881 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 PAPOLGQ9BWT3 736 aaKnown RBP5.35□□□□□ -1.55
USP54-202ENST00000413442 JAM3Q9BX67 310 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 TMPRSS13Q9BYE2 586 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 VCXQ9H320 206 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 FAM118AQ9NWS6 357 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 C1orf123Q9NWV4 160 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.35□□□□□ -1.55
USP54-202ENST00000413442 OR52A1Q9UKL2 312 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 NUP50Q9UKX7 468 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 SLC7A11Q9UPY5 501 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 SLC22A13Q9Y226 551 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 RHBDD3Q9Y3P4 386 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 GMPPBQ9Y5P6 360 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 CACNG2Q9Y698 323 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 V9GYS6 101 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 MTORP42345 2549 aa5.35□□□□□ -1.55
USP54-202ENST00000413442 FN1P02751 2386 aaKnown RBP5.34□□□□□ -1.55
USP54-202ENST00000413442 IGHV2-70DA0A0C4DH43 119 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 A0A1B0GVI7 797 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 hCG_1809904A0A1W2PP81 198 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 A0A1W2PPE2 198 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 A0A1W2PR64 198 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 A0A1W2PRV1 198 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 DAPL1A0PJW8 107 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 H0YAE9 185 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 H0YJX3 145 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 EI24O14681 340 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 NDUFB3O43676 98 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 MITFO75030 526 aaPredicted RBP5.34□□□□□ -1.55
USP54-202ENST00000413442 FSHBP01225 129 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 TTRP02766 147 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 SLC2A1P11166 492 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 PRKACBP22694 351 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 DCKP27707 260 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 EPHA2P29317 976 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 TGM4P49221 684 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 ERFP50548 548 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 FUT6P51993 359 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 CAV3P56539 151 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 PRSS12P56730 875 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 RPL15P61313 204 aaKnown RBP5.34□□□□□ -1.55
USP54-202ENST00000413442 ISL1P61371 349 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 LCN2P80188 198 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 PAX2Q02962 417 aa5.34□□□□□ -1.55
USP54-202ENST00000413442 GALEQ14376 348 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 188.6 ms