RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 HLA-BQ31612 363 aa22.5■■□□□ 1.19
COL13A1-203ENST00000398969 CCDC157Q569K6 752 aa22.5■■□□□ 1.19
COL13A1-203ENST00000398969 AADACL3Q5VUY0 350 aa22.5■■□□□ 1.19
COL13A1-203ENST00000398969 PRSS54Q6PEW0 395 aa22.5■■□□□ 1.19
COL13A1-203ENST00000398969 OR5T2Q8NGG2 359 aa22.5■■□□□ 1.19
COL13A1-203ENST00000398969 RNF141Q8WVD5 230 aa22.5■■□□□ 1.19
COL13A1-203ENST00000398969 OSGIN2Q9Y236 505 aa22.5■■□□□ 1.19
COL13A1-203ENST00000398969 MSGN1A6NI15 193 aa22.5■■□□□ 1.19
COL13A1-203ENST00000398969 AQP7P3A6NL99 342 aa22.5■■□□□ 1.19
COL13A1-203ENST00000398969 GPR31O00270 319 aa22.5■■□□□ 1.19
COL13A1-203ENST00000398969 ACTL6AO96019 429 aa22.5■■□□□ 1.19
COL13A1-203ENST00000398969 PNLIPP16233 465 aa22.5■■□□□ 1.19
COL13A1-203ENST00000398969 ADCYAP1P18509 176 aa22.5■■□□□ 1.19
COL13A1-203ENST00000398969 ZNF239Q16600 458 aaKnown RBP22.5■■□□□ 1.19
COL13A1-203ENST00000398969 TMEM176BQ3YBM2 270 aaPredicted RBP22.5■■□□□ 1.19
COL13A1-203ENST00000398969 NKAPLQ5M9Q1 402 aa22.5■■□□□ 1.19
COL13A1-203ENST00000398969 OR51T1Q8NGJ9 327 aa22.5■■□□□ 1.19
COL13A1-203ENST00000398969 TMED6Q8WW62 240 aa22.5■■□□□ 1.19
COL13A1-203ENST00000398969 ST6GALNAC5Q9BVH7 336 aa22.5■■□□□ 1.19
COL13A1-203ENST00000398969 OR5AC2Q9NZP5 309 aa22.5■■□□□ 1.19
COL13A1-203ENST00000398969 CRIP3Q6Q6R5 217 aa22.49■■□□□ 1.19
COL13A1-203ENST00000398969 WDSUB1Q8N9V3 476 aa22.49■■□□□ 1.19
COL13A1-203ENST00000398969 OR5D18Q8NGL1 313 aa22.49■■□□□ 1.19
COL13A1-203ENST00000398969 SLC22A8Q8TCC7 542 aa22.49■■□□□ 1.19
COL13A1-203ENST00000398969 LY6G6EA0A0G2JKS1 128 aa22.48■■□□□ 1.19
COL13A1-203ENST00000398969 FOXI3A8MTJ6 420 aaPredicted RBP22.48■■□□□ 1.19
COL13A1-203ENST00000398969 HTR3BO95264 441 aa22.48■■□□□ 1.19
COL13A1-203ENST00000398969 KISS1Q15726 138 aa22.48■■□□□ 1.19
COL13A1-203ENST00000398969 GUSBP11Q6P575 273 aa22.48■■□□□ 1.19
COL13A1-203ENST00000398969 C1QL2Q7Z5L3 287 aa22.48■■□□□ 1.19
COL13A1-203ENST00000398969 MAML2Q8IZL2 1156 aaPredicted RBP22.48■■□□□ 1.19
COL13A1-203ENST00000398969 PUSL1Q8N0Z8 303 aaKnown RBP22.48■■□□□ 1.19
COL13A1-203ENST00000398969 PNLDC1Q8NA58 520 aaKnown RBP22.48■■□□□ 1.19
COL13A1-203ENST00000398969 ARL11Q969Q4 196 aa22.48■■□□□ 1.19
COL13A1-203ENST00000398969 LIN37Q96GY3 246 aaPredicted RBP22.48■■□□□ 1.19
COL13A1-203ENST00000398969 LYZL4Q96KX0 146 aa22.48■■□□□ 1.19
COL13A1-203ENST00000398969 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP22.48■■□□□ 1.19
COL13A1-203ENST00000398969 U3KQA8 63 aa22.48■■□□□ 1.19
COL13A1-203ENST00000398969 PRF1P14222 555 aa22.48■■□□□ 1.19
COL13A1-203ENST00000398969 OR3A2P47893 321 aa22.48■■□□□ 1.19
COL13A1-203ENST00000398969 SVBPQ8N300 66 aa22.48■■□□□ 1.19
COL13A1-203ENST00000398969 ESX1Q8N693 406 aa22.48■■□□□ 1.19
COL13A1-203ENST00000398969 SLC25A43Q8WUT9 341 aaPredicted RBP22.48■■□□□ 1.19
COL13A1-203ENST00000398969 SPACA9Q96E40 222 aaPredicted RBP22.48■■□□□ 1.19
COL13A1-203ENST00000398969 OR10C1Q96KK4 312 aa22.48■■□□□ 1.19
COL13A1-203ENST00000398969 SPSB2Q99619 263 aa22.48■■□□□ 1.19
COL13A1-203ENST00000398969 SDCBPO00560 298 aaPredicted RBP22.47■■□□□ 1.19
COL13A1-203ENST00000398969 SIGLEC6O43699 453 aa22.47■■□□□ 1.19
COL13A1-203ENST00000398969 PTGFRP43088 359 aa22.47■■□□□ 1.19
COL13A1-203ENST00000398969 SNU13P55769 128 aaKnown RBP22.47■■□□□ 1.19
COL13A1-203ENST00000398969 CSNK2A1P68400 391 aaPredicted RBP22.47■■□□□ 1.19
COL13A1-203ENST00000398969 ECH1Q13011 328 aa22.47■■□□□ 1.19
COL13A1-203ENST00000398969 CSNK2A3Q8NEV1 391 aa22.47■■□□□ 1.19
COL13A1-203ENST00000398969 PGAM5Q96HS1 289 aa22.47■■□□□ 1.19
COL13A1-203ENST00000398969 RASL10BQ96S79 203 aa22.47■■□□□ 1.19
COL13A1-203ENST00000398969 CRB3Q9BUF7 120 aa22.47■■□□□ 1.19
COL13A1-203ENST00000398969 HDGFL3Q9Y3E1 203 aa22.47■■□□□ 1.19
COL13A1-203ENST00000398969 LOC102725191A0A1B0GVB3 256 aa22.47■■□□□ 1.19
COL13A1-203ENST00000398969 DKK1O94907 266 aa22.47■■□□□ 1.19
COL13A1-203ENST00000398969 IGLV3-1P01715 115 aa22.47■■□□□ 1.19
COL13A1-203ENST00000398969 CTSSP25774 331 aa22.47■■□□□ 1.19
COL13A1-203ENST00000398969 CLDN17P56750 224 aa22.47■■□□□ 1.19
COL13A1-203ENST00000398969 TAS2R46P59540 309 aa22.47■■□□□ 1.19
COL13A1-203ENST00000398969 GUCA2BQ16661 112 aa22.47■■□□□ 1.19
COL13A1-203ENST00000398969 ZNF385CQ66K41 422 aaPredicted RBP22.47■■□□□ 1.19
COL13A1-203ENST00000398969 NPRL2Q8WTW4 380 aa22.47■■□□□ 1.19
COL13A1-203ENST00000398969 AQP10Q96PS8 301 aa22.47■■□□□ 1.19
COL13A1-203ENST00000398969 FAM157CP0CG43 387 aa22.46■■□□□ 1.19
COL13A1-203ENST00000398969 RPS2P15880 293 aaKnown RBP22.46■■□□□ 1.19
COL13A1-203ENST00000398969 GLRA1P23415 457 aa22.46■■□□□ 1.19
COL13A1-203ENST00000398969 SRSF3P84103 164 aaKnown RBP22.46■■□□□ 1.19
COL13A1-203ENST00000398969 STK11Q15831 433 aa22.46■■□□□ 1.19
COL13A1-203ENST00000398969 PLEKHN1Q494U1 663 aaPredicted RBP22.46■■□□□ 1.19
COL13A1-203ENST00000398969 FADS6Q8N9I5 356 aa22.46■■□□□ 1.19
COL13A1-203ENST00000398969 MAFIPQ8WZ33 124 aa22.46■■□□□ 1.19
COL13A1-203ENST00000398969 SLC26A1Q9H2B4 701 aa22.46■■□□□ 1.19
COL13A1-203ENST00000398969 METTL8Q9H825 291 aaKnown RBP22.46■■□□□ 1.19
COL13A1-203ENST00000398969 EHFQ9NZC4 300 aa22.46■■□□□ 1.19
COL13A1-203ENST00000398969 GHRLQ9UBU3 117 aa22.46■■□□□ 1.19
COL13A1-203ENST00000398969 HPNP05981 417 aa22.46■■□□□ 1.19
COL13A1-203ENST00000398969 NAT2P11245 290 aa22.46■■□□□ 1.19
COL13A1-203ENST00000398969 ALDH3B1P43353 468 aa22.46■■□□□ 1.19
COL13A1-203ENST00000398969 SLC6A9P48067 706 aa22.46■■□□□ 1.19
COL13A1-203ENST00000398969 EIF3IQ13347 325 aaKnown RBP22.46■■□□□ 1.19
COL13A1-203ENST00000398969 LCN10Q6JVE6 187 aa22.46■■□□□ 1.19
COL13A1-203ENST00000398969 RHBDD1Q8TEB9 315 aa22.46■■□□□ 1.19
COL13A1-203ENST00000398969 C2orf50Q96LR7 162 aa22.46■■□□□ 1.19
COL13A1-203ENST00000398969 ZNF629Q9UEG4 869 aaPredicted RBP22.46■■□□□ 1.19
COL13A1-203ENST00000398969 RARRES3Q9UL19 164 aa22.46■■□□□ 1.19
COL13A1-203ENST00000398969 EIF1P41567 113 aaKnown RBP22.45■■□□□ 1.18
COL13A1-203ENST00000398969 SLC35A1P78382 337 aa22.45■■□□□ 1.18
COL13A1-203ENST00000398969 ZNF585AQ6P3V2 769 aa22.45■■□□□ 1.18
COL13A1-203ENST00000398969 POC1AQ8NBT0 407 aa22.45■■□□□ 1.18
COL13A1-203ENST00000398969 OR51F2Q8NH61 342 aa22.45■■□□□ 1.18
COL13A1-203ENST00000398969 PECRQ9BY49 303 aa22.45■■□□□ 1.18
COL13A1-203ENST00000398969 A0A1W2PQM1 296 aa22.45■■□□□ 1.18
COL13A1-203ENST00000398969 NUDT19A8MXV4 375 aa22.45■■□□□ 1.18
COL13A1-203ENST00000398969 TLX3O43711 291 aaPredicted RBP22.45■■□□□ 1.18
COL13A1-203ENST00000398969 CFIP05156 583 aa22.45■■□□□ 1.18
COL13A1-203ENST00000398969 ADH6P28332 368 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms