RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 STEAP1Q9UHE8 339 aa11.76□□□□□ -0.53
VAPB-202ENST00000395802 IQCF6A8MYZ5 107 aa11.76□□□□□ -0.53
VAPB-202ENST00000395802 CD3EP07766 207 aa11.76□□□□□ -0.53
VAPB-202ENST00000395802 CALCBP10092 127 aa11.76□□□□□ -0.53
VAPB-202ENST00000395802 ADRA2CP18825 462 aa11.76□□□□□ -0.53
VAPB-202ENST00000395802 KITLGP21583 273 aa11.76□□□□□ -0.53
VAPB-202ENST00000395802 FUT6P51993 359 aa11.76□□□□□ -0.53
VAPB-202ENST00000395802 NKX6-1P78426 367 aaPredicted RBP11.76□□□□□ -0.53
VAPB-202ENST00000395802 BSPH1Q075Z2 132 aa11.76□□□□□ -0.53
VAPB-202ENST00000395802 SPATA46Q5T0L3 261 aa11.76□□□□□ -0.53
VAPB-202ENST00000395802 ASPHD2Q6ICH7 369 aa11.76□□□□□ -0.53
VAPB-202ENST00000395802 LHFPL2Q6ZUX7 228 aa11.76□□□□□ -0.53
VAPB-202ENST00000395802 ZDHHC23Q8IYP9 409 aa11.76□□□□□ -0.53
VAPB-202ENST00000395802 SYNPRQ8TBG9 265 aa11.76□□□□□ -0.53
VAPB-202ENST00000395802 BORCS8Q96FH0 119 aa11.76□□□□□ -0.53
VAPB-202ENST00000395802 CMTM3Q96MX0 182 aa11.76□□□□□ -0.53
VAPB-202ENST00000395802 GPER1Q99527 375 aa11.76□□□□□ -0.53
VAPB-202ENST00000395802 POU2F3Q9UKI9 436 aa11.76□□□□□ -0.53
VAPB-202ENST00000395802 HEATR1Q9H583 2144 aaKnown RBP11.75□□□□□ -0.53
VAPB-202ENST00000395802 KMT2BQ9UMN6 2715 aaPredicted RBP11.75□□□□□ -0.53
VAPB-202ENST00000395802 ATP6V1G2-DDX39BF2Z307 99 aa11.75□□□□□ -0.53
VAPB-202ENST00000395802 SLC17A2O00624 439 aa11.75□□□□□ -0.53
VAPB-202ENST00000395802 CD37P11049 281 aa11.75□□□□□ -0.53
VAPB-202ENST00000395802 PRF1P14222 555 aa11.75□□□□□ -0.53
VAPB-202ENST00000395802 ZNF250P15622 560 aa11.75□□□□□ -0.53
VAPB-202ENST00000395802 AZGP1P25311 298 aaKnown RBP11.75□□□□□ -0.53
VAPB-202ENST00000395802 HTR2CP28335 458 aa11.75□□□□□ -0.53
VAPB-202ENST00000395802 RBP2P50120 134 aa11.75□□□□□ -0.53
VAPB-202ENST00000395802 MZT1Q08AG7 82 aa11.75□□□□□ -0.53
VAPB-202ENST00000395802 TNK1Q13470 666 aa11.75□□□□□ -0.53
VAPB-202ENST00000395802 UBE2V2Q15819 145 aa11.75□□□□□ -0.53
VAPB-202ENST00000395802 RAB11BQ15907 218 aa11.75□□□□□ -0.53
VAPB-202ENST00000395802 NCMAPQ5T1S8 102 aa11.75□□□□□ -0.53
VAPB-202ENST00000395802 PLCXD3Q63HM9 321 aa11.75□□□□□ -0.53
VAPB-202ENST00000395802 OR2T2Q6IF00 324 aa11.75□□□□□ -0.53
VAPB-202ENST00000395802 OR51A2Q8NGJ7 313 aa11.75□□□□□ -0.53
VAPB-202ENST00000395802 LINC01560Q8TB33 94 aa11.75□□□□□ -0.53
VAPB-202ENST00000395802 S100A13Q99584 98 aa11.75□□□□□ -0.53
VAPB-202ENST00000395802 ZNF442Q9H7R0 627 aa11.75□□□□□ -0.53
VAPB-202ENST00000395802 NKIRAS2Q9NYR9 191 aa11.75□□□□□ -0.53
VAPB-202ENST00000395802 GHRLQ9UBU3 117 aa11.75□□□□□ -0.53
VAPB-202ENST00000395802 CGGBP1Q9UFW8 167 aaPredicted RBP11.75□□□□□ -0.53
VAPB-202ENST00000395802 GPR160Q9UJ42 338 aa11.75□□□□□ -0.53
VAPB-202ENST00000395802 RHBDD3Q9Y3P4 386 aa11.75□□□□□ -0.53
VAPB-202ENST00000395802 FAM208BQ5VWN6 2430 aa11.75□□□□□ -0.53
VAPB-202ENST00000395802 DPRXA6NFQ7 191 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 TIMM8AO60220 97 aaPredicted RBP11.74□□□□□ -0.53
VAPB-202ENST00000395802 HPGDSO60760 199 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 SLC2A2P11168 524 aaPredicted RBP11.74□□□□□ -0.53
VAPB-202ENST00000395802 KIR2DL3P43628 341 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 FABP6P51161 128 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 ATP1B3P54709 279 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 IFITM3Q01628 133 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 PSG7Q13046 419 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 CDSNQ15517 529 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 FAM189A2Q15884 450 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 ZNF79Q15937 498 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 CEACAM21Q3KPI0 293 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 MOB3CQ70IA8 216 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 SNX29P2Q8IUI4 249 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 SPERTQ8NA61 448 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 OR52N4Q8NGI2 321 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 UBASH3BQ8TF42 649 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 PLPPR2Q96GM1 343 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 DIRAS2Q96HU8 199 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 SDHCQ99643 169 aaPredicted RBP11.74□□□□□ -0.53
VAPB-202ENST00000395802 POFUT1Q9H488 388 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 OCEL1Q9H607 264 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 LIN7BQ9HAP6 207 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 CYSLTR2Q9NS75 346 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 TMEM100Q9NV29 134 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 PURGQ9UJV8 347 aaKnown RBP11.74□□□□□ -0.53
VAPB-202ENST00000395802 ETV7Q9Y603 341 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.74□□□□□ -0.53
VAPB-202ENST00000395802 PLSCR5A0PG75 271 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 OR5B21A6NL26 309 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 ZNF850A8MQ14 1090 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 UBBP0CG47 229 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 ARSBP15848 533 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 MTCP1P56278 107 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 KLF3P57682 345 aaPredicted RBP11.74□□□□□ -0.53
VAPB-202ENST00000395802 PRDX4Q13162 271 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 KISS1Q15726 138 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 C1orf100Q5SVJ3 147 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 OR5AS1Q8N127 324 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 BHLHE23Q8NDY6 225 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 OR8G5Q8NG78 346 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 OR5A2Q8NGI9 324 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 OR8S1Q8NH09 359 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 PCDHB16Q9NRJ7 776 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 GPR173Q9NS66 373 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 CA10Q9NS85 328 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 SPATA2Q9UM82 520 aa11.74□□□□□ -0.53
VAPB-202ENST00000395802 ANKHD1Q8IWZ3 2542 aaKnown RBP11.73□□□□□ -0.53
VAPB-202ENST00000395802 ZNF462Q96JM2 2506 aa11.73□□□□□ -0.53
VAPB-202ENST00000395802 IGKV1-9A0A0C4DH69 117 aa11.73□□□□□ -0.53
VAPB-202ENST00000395802 UPK1BO75841 260 aa11.73□□□□□ -0.53
VAPB-202ENST00000395802 IGHV3-13P01766 116 aa11.73□□□□□ -0.53
VAPB-202ENST00000395802 GRNP28799 593 aaKnown RBP11.73□□□□□ -0.53
VAPB-202ENST00000395802 TALDO1P37837 337 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms