RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 VSIG10L2P0DP72 767 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 ZNF708P17019 499 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 LHX2P50458 406 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 DHODHQ02127 395 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 MPPED2Q15777 294 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 RSPO1Q2MKA7 263 aaPredicted RBP9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 ACTBL2Q562R1 376 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 RNASE10Q5GAN6 216 aaKnown RBP9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 RTL6Q6ICC9 239 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 IDO2Q6ZQW0 420 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 CHMP1BQ7LBR1 199 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 NAA40Q86UY6 237 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 SULF2Q8IWU5 870 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 BPIFB2Q8N4F0 458 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 STEAP2Q8NFT2 490 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 OR2T35Q8NGX2 323 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 LILRB4Q8NHJ6 448 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 SPSB1Q96BD6 273 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 MS4A3Q96HJ5 214 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 OR2A7Q96R45 310 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 GAL3ST1Q99999 423 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 SOX7Q9BT81 388 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 TTTY12Q9BZ98 90 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 MYEF2Q9P2K5 600 aaKnown RBP9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 MCTS1Q9ULC4 181 aaKnown RBP9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 ANAPC10Q9UM13 185 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 NOSIPQ9Y314 301 aaKnown RBP9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 ATMQ13315 3056 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 IGKV1-9A0A0C4DH69 117 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 TMEM82A0PJX8 343 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 ZNF724A8MTY0 619 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 NME2P1O60361 137 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 MPIG6BO95866 241 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 NAT2P11245 290 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 ZNF32P17041 273 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 NAT1P18440 290 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 NME2P22392 152 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 OR3A4PP47883 348 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 RRADP55042 308 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 CLDN18P56856 261 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 SOX8P57073 446 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 GNG2P59768 71 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 PLGLB1Q02325 96 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 CNN3Q15417 329 aaKnown RBP9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 KISS1Q15726 138 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 CEACAM16Q2WEN9 425 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 SLC16A14Q7RTX9 510 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 GALNT16Q8N428 558 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 IL22RA1Q8N6P7 574 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 ZDHHC22Q8N966 263 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 MDS2Q8NDY4 140 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 SEMA6DQ8NFY4 1073 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 HAS2Q92819 552 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 DVL3Q92997 716 aaPredicted RBP9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 ALKBH3Q96Q83 286 aaPredicted RBP9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 S100A13Q99584 98 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 TMPRSS13Q9BYE2 586 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 ZNF224Q9NZL3 707 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 PIGLQ9Y2B2 252 aa9.16□□□□□ -0.94
POLR2J3-201ENST00000379340 WIPF3A6NGB9 483 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 E9PLN8 166 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 H3BUI4 141 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 RPL36A-HNRNPH2H7BZ11 118 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 XRCC2O43543 280 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 MRPL33O75394 65 aaKnown RBP9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 CA11O75493 328 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 CRTAPO75718 401 aaPredicted RBP9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 ACTL6AO96019 429 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 TPOP07202 933 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 SP1P08047 785 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 B4GALT1P15291 398 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 CD46P15529 392 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 HIST1H1DP16402 221 aaKnown RBP9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 PRKACBP22694 351 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 NTF4P34130 210 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 PTGFRP43088 359 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 RPS27AP62979 156 aaKnown RBP9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 GK2Q14410 553 aaPredicted RBP9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 PPA1Q15181 289 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 ZNF774Q6NX45 483 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 ZNF100Q8IYN0 542 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 FAM89BQ8N5H3 189 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 OR2AK2Q8NG84 335 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 SGK3Q96BR1 496 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 RAB3CQ96E17 227 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 ZNF837Q96EG3 531 aaPredicted RBP9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 ZNF845Q96IR2 970 aaPredicted RBP9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 TECTBQ96PL2 329 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 TM2D1Q9BX74 207 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 SELENOIQ9C0D9 397 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 OR2H1Q9GZK4 316 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 TINAGL1Q9GZM7 467 aaPredicted RBP9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 IL17BQ9UHF5 180 aa9.15□□□□□ -0.95
POLR2J3-201ENST00000379340 MED12Q93074 2177 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 M0QYG6 137 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 AKR7A2O43488 359 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 F10P00742 488 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 DBHP09172 617 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 GNB3P16520 340 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms