RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 CLDN23Q96B33 292 aa22.25■■□□□ 1.15
C9orf40-201ENST00000376854 ZNF160Q9HCG1 818 aa22.25■■□□□ 1.15
C9orf40-201ENST00000376854 CYTL1Q9NRR1 136 aa22.25■■□□□ 1.15
C9orf40-201ENST00000376854 SLC39A1Q9NY26 324 aa22.25■■□□□ 1.15
C9orf40-201ENST00000376854 IGHV5-10-1A0A0J9YXX1 117 aa22.24■■□□□ 1.15
C9orf40-201ENST00000376854 SDCBPO00560 298 aaPredicted RBP22.24■■□□□ 1.15
C9orf40-201ENST00000376854 ATG12O94817 140 aa22.24■■□□□ 1.15
C9orf40-201ENST00000376854 PRF1P14222 555 aa22.24■■□□□ 1.15
C9orf40-201ENST00000376854 GUCA1AP43080 201 aaPredicted RBP22.24■■□□□ 1.15
C9orf40-201ENST00000376854 SNU13P55769 128 aaKnown RBP22.24■■□□□ 1.15
C9orf40-201ENST00000376854 AADACL3Q5VUY0 350 aa22.24■■□□□ 1.15
C9orf40-201ENST00000376854 SLC6A15Q9H2J7 730 aa22.24■■□□□ 1.15
C9orf40-201ENST00000376854 CTSSP25774 331 aa22.24■■□□□ 1.15
C9orf40-201ENST00000376854 LSM6P62312 80 aaKnown RBP22.24■■□□□ 1.15
C9orf40-201ENST00000376854 Q7L0L9 218 aa22.24■■□□□ 1.15
C9orf40-201ENST00000376854 CLRN3Q8NCR9 226 aa22.24■■□□□ 1.15
C9orf40-201ENST00000376854 BHLHE23Q8NDY6 225 aa22.24■■□□□ 1.15
C9orf40-201ENST00000376854 HLA-CQ95604 372 aa22.24■■□□□ 1.15
C9orf40-201ENST00000376854 TMEM100Q9NV29 134 aa22.24■■□□□ 1.15
C9orf40-201ENST00000376854 OSGIN2Q9Y236 505 aa22.24■■□□□ 1.15
C9orf40-201ENST00000376854 CHCHD2Q9Y6H1 151 aaPredicted RBP22.24■■□□□ 1.15
C9orf40-201ENST00000376854 TMEM218A2RU14 115 aa22.23■■□□□ 1.15
C9orf40-201ENST00000376854 F5H5K5 113 aa22.23■■□□□ 1.15
C9orf40-201ENST00000376854 MSR1P21757 451 aa22.23■■□□□ 1.15
C9orf40-201ENST00000376854 FKBP2P26885 142 aaKnown RBP22.23■■□□□ 1.15
C9orf40-201ENST00000376854 SLC6A9P48067 706 aa22.23■■□□□ 1.15
C9orf40-201ENST00000376854 AKR1C2P52895 323 aa22.23■■□□□ 1.15
C9orf40-201ENST00000376854 TAS2R46P59540 309 aa22.23■■□□□ 1.15
C9orf40-201ENST00000376854 AKR1C1Q04828 323 aa22.23■■□□□ 1.15
C9orf40-201ENST00000376854 NKAPLQ5M9Q1 402 aa22.23■■□□□ 1.15
C9orf40-201ENST00000376854 PDSS1Q5T2R2 415 aa22.23■■□□□ 1.15
C9orf40-201ENST00000376854 CRIP3Q6Q6R5 217 aa22.23■■□□□ 1.15
C9orf40-201ENST00000376854 MAFIPQ8WZ33 124 aa22.23■■□□□ 1.15
C9orf40-201ENST00000376854 METTL8Q9H825 291 aaKnown RBP22.23■■□□□ 1.15
C9orf40-201ENST00000376854 AKIRIN1Q9H9L7 192 aaPredicted RBP22.23■■□□□ 1.15
C9orf40-201ENST00000376854 EHFQ9NZC4 300 aa22.23■■□□□ 1.15
C9orf40-201ENST00000376854 GHRLQ9UBU3 117 aa22.23■■□□□ 1.15
C9orf40-201ENST00000376854 EPHA8P29322 1005 aaPredicted RBP22.23■■□□□ 1.15
C9orf40-201ENST00000376854 BLVRBP30043 206 aaPredicted RBP22.23■■□□□ 1.15
C9orf40-201ENST00000376854 PRSS54Q6PEW0 395 aa22.23■■□□□ 1.15
C9orf40-201ENST00000376854 RNF141Q8WVD5 230 aa22.23■■□□□ 1.15
C9orf40-201ENST00000376854 TMED6Q8WW62 240 aa22.23■■□□□ 1.15
C9orf40-201ENST00000376854 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP22.23■■□□□ 1.15
C9orf40-201ENST00000376854 OR5AC2Q9NZP5 309 aa22.23■■□□□ 1.15
C9orf40-201ENST00000376854 MSGN1A6NI15 193 aa22.22■■□□□ 1.15
C9orf40-201ENST00000376854 STMND1H3BQB6 276 aa22.22■■□□□ 1.15
C9orf40-201ENST00000376854 SIGLEC6O43699 453 aa22.22■■□□□ 1.15
C9orf40-201ENST00000376854 ONECUT2O95948 504 aa22.22■■□□□ 1.15
C9orf40-201ENST00000376854 IGLV3-1P01715 115 aa22.22■■□□□ 1.15
C9orf40-201ENST00000376854 PNLIPP16233 465 aa22.22■■□□□ 1.15
C9orf40-201ENST00000376854 GLRA1P23415 457 aa22.22■■□□□ 1.15
C9orf40-201ENST00000376854 CSNK1A1P48729 337 aa22.22■■□□□ 1.15
C9orf40-201ENST00000376854 PPP1R3BQ86XI6 285 aa22.22■■□□□ 1.15
C9orf40-201ENST00000376854 CCDC74BQ96LY2 380 aa22.22■■□□□ 1.15
C9orf40-201ENST00000376854 FOXI3A8MTJ6 420 aaPredicted RBP22.22■■□□□ 1.15
C9orf40-201ENST00000376854 TP53I11O14683 189 aa22.22■■□□□ 1.15
C9orf40-201ENST00000376854 HPNP05981 417 aa22.22■■□□□ 1.15
C9orf40-201ENST00000376854 CD79AP11912 226 aa22.22■■□□□ 1.15
C9orf40-201ENST00000376854 NR2C1P13056 603 aa22.22■■□□□ 1.15
C9orf40-201ENST00000376854 SERPINA2P20848 420 aa22.22■■□□□ 1.15
C9orf40-201ENST00000376854 THBS4P35443 961 aa22.22■■□□□ 1.15
C9orf40-201ENST00000376854 EIF3IQ13347 325 aaKnown RBP22.22■■□□□ 1.15
C9orf40-201ENST00000376854 CCDC157Q569K6 752 aa22.22■■□□□ 1.15
C9orf40-201ENST00000376854 OR10C1Q96KK4 312 aa22.22■■□□□ 1.15
C9orf40-201ENST00000376854 TSNAXQ99598 290 aaKnown RBP22.22■■□□□ 1.15
C9orf40-201ENST00000376854 PECRQ9BY49 303 aa22.22■■□□□ 1.15
C9orf40-201ENST00000376854 GDF9O60383 454 aa22.21■■□□□ 1.15
C9orf40-201ENST00000376854 NAT2P11245 290 aa22.21■■□□□ 1.15
C9orf40-201ENST00000376854 LYL1P12980 280 aa22.21■■□□□ 1.15
C9orf40-201ENST00000376854 PI4KAP42356 2102 aa22.21■■□□□ 1.15
C9orf40-201ENST00000376854 ALDH3B1P43353 468 aa22.21■■□□□ 1.15
C9orf40-201ENST00000376854 UBE2V2Q15819 145 aa22.21■■□□□ 1.15
C9orf40-201ENST00000376854 GJC3Q8NFK1 279 aa22.21■■□□□ 1.15
C9orf40-201ENST00000376854 NELFAQ9H3P2 528 aa22.21■■□□□ 1.15
C9orf40-201ENST00000376854 DHRS3O75911 302 aa22.2■■□□□ 1.15
C9orf40-201ENST00000376854 FAHP16930 419 aa22.2■■□□□ 1.15
C9orf40-201ENST00000376854 PHYHD1Q5SRE7 291 aa22.2■■□□□ 1.15
C9orf40-201ENST00000376854 ARL11Q969Q4 196 aa22.2■■□□□ 1.15
C9orf40-201ENST00000376854 OR5H15A6NDH6 313 aa22.2■■□□□ 1.14
C9orf40-201ENST00000376854 GPR31O00270 319 aa22.2■■□□□ 1.14
C9orf40-201ENST00000376854 ABCD4O14678 606 aa22.2■■□□□ 1.14
C9orf40-201ENST00000376854 FCGR2AP12318 317 aa22.2■■□□□ 1.14
C9orf40-201ENST00000376854 ENDOGQ14249 297 aaKnown RBP22.2■■□□□ 1.14
C9orf40-201ENST00000376854 ZNF585AQ6P3V2 769 aa22.2■■□□□ 1.14
C9orf40-201ENST00000376854 C2orf50Q96LR7 162 aa22.2■■□□□ 1.14
C9orf40-201ENST00000376854 SLC26A1Q9H2B4 701 aa22.2■■□□□ 1.14
C9orf40-201ENST00000376854 PCDHB16Q9NRJ7 776 aa22.2■■□□□ 1.14
C9orf40-201ENST00000376854 V9GYS6 101 aa22.2■■□□□ 1.14
C9orf40-201ENST00000376854 A0A0U1RQV5 110 aa22.19■■□□□ 1.14
C9orf40-201ENST00000376854 ACTL6AO96019 429 aa22.19■■□□□ 1.14
C9orf40-201ENST00000376854 ICAM2P13598 275 aa22.19■■□□□ 1.14
C9orf40-201ENST00000376854 H3F3AP84243 136 aa22.19■■□□□ 1.14
C9orf40-201ENST00000376854 CHRFAM7AQ494W8 412 aa22.19■■□□□ 1.14
C9orf40-201ENST00000376854 PABPC1L2AQ5JQF8 200 aa22.19■■□□□ 1.14
C9orf40-201ENST00000376854 LRRC18Q8N456 261 aa22.19■■□□□ 1.14
C9orf40-201ENST00000376854 S100A13Q99584 98 aa22.19■■□□□ 1.14
C9orf40-201ENST00000376854 DUSP23Q9BVJ7 150 aa22.19■■□□□ 1.14
C9orf40-201ENST00000376854 ELL3Q9HB65 397 aaPredicted RBP22.19■■□□□ 1.14
C9orf40-201ENST00000376854 SERPINE3A8MV23 424 aa22.19■■□□□ 1.14
C9orf40-201ENST00000376854 RPS2P15880 293 aaKnown RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms