RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 SPINT1O43278 529 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 GSTZ1O43708 216 aaPredicted RBP10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 PTHLHP12272 177 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 GLRA1P23415 457 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 PTGFRP43088 359 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 SLC37A1P57057 533 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 TESK1Q15569 626 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 WDR74Q6RFH5 385 aaPredicted RBP10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 ZFP82Q8N141 532 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 OR10Z1Q8NGY1 313 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 OR6X1Q8NH79 312 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 ZC3HAV1LQ96H79 300 aaKnown RBP10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 RNF32Q9H0A6 362 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 ZFP64Q9NPA5 681 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 AK3Q9UIJ7 227 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 MDFIC2A0A1B0GVS7 189 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 ANKRD20A5PA0PJZ0 165 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 ZNF724A8MTY0 619 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 TSTD3H0UI37 97 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 ANGPTL7O43827 346 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 OR8U8P0C7N1 319 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 CD37P11049 281 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 SRD5A2P31213 254 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 DBPQ10586 325 aaPredicted RBP10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 PDZK1IP1Q13113 114 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 BOD1Q96IK1 185 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 MTCH2Q9Y6C9 303 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 A0A1W2PPH5 198 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 APOA2P02652 100 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 AVPR2P30518 371 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 CHRNB4P30926 498 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 DHRS2Q13268 280 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 ACER2Q5QJU3 275 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 GCNT2Q8N0V5 402 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 EDARADDQ8WWZ3 215 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 CIB3Q96Q77 187 aaPredicted RBP10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 SAMD10Q9BYL1 202 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 FAM234AQ9H0X4 552 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 DNAJC13O75165 2243 aa10.59□□□□□ -0.71
DEPDC1-201ENST00000370966 A0A1B0GTH9 108 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 ZFP92A6NM28 416 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 SIRPB1O00241 398 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 FAM199XQ6PEV8 388 aaPredicted RBP10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 TMEM182Q6ZP80 229 aaPredicted RBP10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 CPEB3Q8NE35 698 aaKnown RBP10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 RGPD4Q7Z3J3 1758 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 CT45A8P0DMV1 189 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 CT45A9P0DMV2 189 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 HLA-DOBP13765 273 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 MAGEB1P43366 347 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 RAB1AP62820 205 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 GNG3P63215 75 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 CT45A2Q5DJT8 189 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 ZAR1Q86SH2 424 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 SLC38A6Q8IZM9 456 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 FBXW5Q969U6 566 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 TRIB1Q96RU8 372 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 EDEM2Q9BV94 578 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 C1QTNF6Q9BXI9 259 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 RRP8O43159 456 aaKnown RBP10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 SEMG1P04279 462 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 RFC3P40938 356 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 FZD5Q13467 585 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 RNPS1Q15287 305 aaKnown RBP10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 ZNF626Q68DY1 528 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 DHRS9Q9BPW9 319 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 MIXL1Q9H2W2 232 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 AQP7P3A6NL99 342 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 OR4C45A6NMZ5 311 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 GPR31O00270 319 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 OR13C7P0DN81 318 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 PEBP1P30086 187 aaKnown RBP10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 SPANXN5Q5MJ07 72 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 COL13A1Q5TAT6 717 aaPredicted RBP10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 TSEN54Q7Z6J9 526 aaKnown RBP10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 CDC20BQ86Y33 519 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 Q8IYB0 196 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 RBMXL3Q8N7X1 1067 aaKnown RBP10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 OR10P1Q8NGE3 313 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 HPSE2Q8WWQ2 592 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 H1FXQ92522 213 aaKnown RBP10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 EXTL1Q92935 676 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 GPA33Q99795 319 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 PARP12Q9H0J9 701 aaKnown RBP10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 RAB18Q9NP72 206 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 SSUH2Q9Y2M2 353 aa10.58□□□□□ -0.72
DEPDC1-201ENST00000370966 TDRD15B5MCY1 1934 aaKnown RBP10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 APC2O95996 2303 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 TCRBV16S1A1N1A0A5B0 115 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 ENSAO43768 121 aaKnown RBP10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 HYAL3O43820 417 aaPredicted RBP10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 NME2P1O60361 137 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 GPANK1O95872 356 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 ACKR3P25106 362 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 CD96P40200 585 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 SKP2Q13309 424 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 SSPNQ14714 243 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 OR1C1Q15619 314 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 MESTQ5EB52 335 aa10.57□□□□□ -0.72
DEPDC1-201ENST00000370966 ADAM5Q6NVV9 412 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms