RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 ZNF66Q6ZN08 573 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 OR10X1Q8NGY0 326 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 ST6GAL2Q96JF0 529 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 HSBP1O75506 76 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 MMP7P09237 267 aaPredicted RBP13.34□□□□□ -0.27
CHD4-201ENST00000357008 CD96P40200 585 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 INSM1Q01101 510 aaPredicted RBP13.34□□□□□ -0.27
CHD4-201ENST00000357008 GTF2H5Q6ZYL4 71 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 KLF13Q9Y2Y9 288 aaPredicted RBP13.34□□□□□ -0.27
CHD4-201ENST00000357008 IGLV3-16A0A075B6K0 115 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 MASP2O00187 686 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 SPRY1O43609 319 aaPredicted RBP13.34□□□□□ -0.27
CHD4-201ENST00000357008 DGAT2L6Q6ZPD8 337 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 HSD17B13Q7Z5P4 300 aaPredicted RBP13.34□□□□□ -0.27
CHD4-201ENST00000357008 CCDC74BQ96LY2 380 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 NDFIP1Q9BT67 221 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 VAMP8Q9BV40 100 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 C1QTNF6Q9BXI9 259 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 SLC35B3Q9H1N7 401 aa13.34□□□□□ -0.27
CHD4-201ENST00000357008 ZNF230Q9UIE0 474 aaPredicted RBP13.34□□□□□ -0.27
CHD4-201ENST00000357008 DBX1A6NMT0 343 aa13.33□□□□□ -0.27
CHD4-201ENST00000357008 PPM1DO15297 605 aa13.33□□□□□ -0.27
CHD4-201ENST00000357008 CTAG2O75638 210 aa13.33□□□□□ -0.27
CHD4-201ENST00000357008 HIST1H1DP16402 221 aaKnown RBP13.33□□□□□ -0.27
CHD4-201ENST00000357008 HNRNPA3P51991 378 aaKnown RBP13.33□□□□□ -0.27
CHD4-201ENST00000357008 KMT5CQ86Y97 462 aa13.33□□□□□ -0.27
CHD4-201ENST00000357008 ZADH2Q8N4Q0 377 aa13.33□□□□□ -0.27
CHD4-201ENST00000357008 MBTPS2O43462 519 aa13.33□□□□□ -0.28
CHD4-201ENST00000357008 PRSS23O95084 383 aa13.33□□□□□ -0.28
CHD4-201ENST00000357008 PLAC1Q9HBJ0 212 aa13.33□□□□□ -0.28
CHD4-201ENST00000357008 C9orf170A2RU37 121 aa13.33□□□□□ -0.28
CHD4-201ENST00000357008 RGS13O14921 159 aa13.33□□□□□ -0.28
CHD4-201ENST00000357008 MPC2O95563 127 aa13.33□□□□□ -0.28
CHD4-201ENST00000357008 B4GALT1P15291 398 aa13.33□□□□□ -0.28
CHD4-201ENST00000357008 FAM219BQ5XKK7 198 aa13.33□□□□□ -0.28
CHD4-201ENST00000357008 EXTL1Q92935 676 aa13.33□□□□□ -0.28
CHD4-201ENST00000357008 GALMQ96C23 342 aa13.33□□□□□ -0.28
CHD4-201ENST00000357008 IL21Q9HBE4 155 aa13.33□□□□□ -0.28
CHD4-201ENST00000357008 C20orf141Q9NUB4 165 aa13.33□□□□□ -0.28
CHD4-201ENST00000357008 N4BP2Q86UW6 1770 aaPredicted RBP13.33□□□□□ -0.28
CHD4-201ENST00000357008 UBE2L5PA0A1B0GUS4 154 aa13.33□□□□□ -0.28
CHD4-201ENST00000357008 TOX4O94842 621 aa13.33□□□□□ -0.28
CHD4-201ENST00000357008 SLC6A1P30531 599 aa13.33□□□□□ -0.28
CHD4-201ENST00000357008 CNN1P51911 297 aaKnown RBP13.33□□□□□ -0.28
CHD4-201ENST00000357008 MVDP53602 400 aa13.33□□□□□ -0.28
CHD4-201ENST00000357008 MRM1Q6IN84 353 aaKnown RBP13.33□□□□□ -0.28
CHD4-201ENST00000357008 Q7L0L9 218 aa13.33□□□□□ -0.28
CHD4-201ENST00000357008 MENTQ9BUN1 341 aa13.33□□□□□ -0.28
CHD4-201ENST00000357008 TRAPPC1Q9Y5R8 145 aa13.33□□□□□ -0.28
CHD4-201ENST00000357008 IGHV3-64DA0A0J9YX35 117 aa13.33□□□□□ -0.28
CHD4-201ENST00000357008 MRPS24Q96EL2 167 aaKnown RBP13.33□□□□□ -0.28
CHD4-201ENST00000357008 GNB4Q9HAV0 340 aa13.33□□□□□ -0.28
CHD4-201ENST00000357008 LOXHD1Q8IVV2 1947 aa13.33□□□□□ -0.28
CHD4-201ENST00000357008 ZBTB25P24278 435 aa13.33□□□□□ -0.28
CHD4-201ENST00000357008 RPL11P62913 178 aaKnown RBP13.33□□□□□ -0.28
CHD4-201ENST00000357008 CST9Q5W186 159 aa13.33□□□□□ -0.28
CHD4-201ENST00000357008 BCL7CQ8WUZ0 217 aaPredicted RBP13.33□□□□□ -0.28
CHD4-201ENST00000357008 IGHV3-15A0A0B4J1V0 119 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 YIF1AO95070 293 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 FBP1P09467 338 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 ZGLP1P0C6A0 271 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 ERVFC1-1P60608 527 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 SP6Q3SY56 376 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 DEGS2Q6QHC5 323 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 FBXL14Q8N1E6 418 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.32□□□□□ -0.28
CHD4-201ENST00000357008 SCMH1Q96GD3 660 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 CACNA1CQ13936 2221 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 AKAP11Q9UKA4 1901 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 GPR37O15354 613 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 MRGPRX1Q96LB2 322 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 PARD6AQ9NPB6 346 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 ANKRD20A5PA0PJZ0 165 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 F2RP25116 425 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 GNB1P62873 340 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 CD300CQ08708 224 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 UBAC2Q8NBM4 344 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 HMGCLL1Q8TB92 370 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 MMP24Q9Y5R2 645 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 MYO5AQ9Y4I1 1855 aaKnown RBP13.32□□□□□ -0.28
CHD4-201ENST00000357008 TNFSF11O14788 317 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 DUS4LO95620 317 aaKnown RBP13.32□□□□□ -0.28
CHD4-201ENST00000357008 ABCD3P28288 659 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 CDAP32320 146 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 PRSS54Q6PEW0 395 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 ROBO4Q8WZ75 1007 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 ABHD1Q96SE0 405 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 CBR3O75828 277 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 ARHGAP5-AS1Q96IT6 56 aa13.32□□□□□ -0.28
CHD4-201ENST00000357008 ANKRD36CQ5JPF3 1778 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 CBY3A6NI87 242 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 CRYAAP02489 173 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 PAX6P26367 422 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 SLC37A1P57057 533 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 DUSP2Q05923 314 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 RAB32Q13637 225 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 PRR27Q6MZM9 219 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 C19orf35Q6ZS72 473 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 ADPRHL1Q8NDY3 354 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 RASL12Q9NYN1 266 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms