RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 ANAPC10Q9UM13 185 aa14.58□□□□□ -0.08
SAMM50-201ENST00000350028 OR14I1A6ND48 311 aa14.57□□□□□ -0.08
SAMM50-201ENST00000350028 RPL36A-HNRNPH2H7BZ11 118 aa14.57□□□□□ -0.08
SAMM50-201ENST00000350028 SOCS1O15524 211 aa14.57□□□□□ -0.08
SAMM50-201ENST00000350028 SSX5O60225 188 aa14.57□□□□□ -0.08
SAMM50-201ENST00000350028 ACTL6AO96019 429 aa14.57□□□□□ -0.08
SAMM50-201ENST00000350028 PATE4P0C8F1 98 aa14.57□□□□□ -0.08
SAMM50-201ENST00000350028 NAT1P18440 290 aa14.57□□□□□ -0.08
SAMM50-201ENST00000350028 CBX5P45973 191 aa14.57□□□□□ -0.08
SAMM50-201ENST00000350028 RRADP55042 308 aa14.57□□□□□ -0.08
SAMM50-201ENST00000350028 SLC22A6Q4U2R8 563 aa14.57□□□□□ -0.08
SAMM50-201ENST00000350028 C4orf46Q504U0 113 aa14.57□□□□□ -0.08
SAMM50-201ENST00000350028 OR2AK2Q8NG84 335 aa14.57□□□□□ -0.08
SAMM50-201ENST00000350028 NPRL2Q8WTW4 380 aa14.57□□□□□ -0.08
SAMM50-201ENST00000350028 TNFAIP8L1Q8WVP5 186 aa14.57□□□□□ -0.08
SAMM50-201ENST00000350028 CPNE2Q96FN4 548 aaPredicted RBP14.57□□□□□ -0.08
SAMM50-201ENST00000350028 PRRG4Q9BZD6 226 aa14.57□□□□□ -0.08
SAMM50-201ENST00000350028 CHIAQ9BZP6 476 aa14.57□□□□□ -0.08
SAMM50-201ENST00000350028 CHST6Q9GZX3 395 aa14.57□□□□□ -0.08
SAMM50-201ENST00000350028 IRF2BPLQ9H1B7 796 aa14.57□□□□□ -0.08
SAMM50-201ENST00000350028 POFUT1Q9H488 388 aa14.57□□□□□ -0.08
SAMM50-201ENST00000350028 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.57□□□□□ -0.084e-15■■■■■ 31.4
SAMM50-201ENST00000350028 CA10Q9NS85 328 aa14.57□□□□□ -0.08
SAMM50-201ENST00000350028 ATPIF1Q9UII2 106 aa14.57□□□□□ -0.08
SAMM50-201ENST00000350028 KCNK7Q9Y2U2 307 aa14.57□□□□□ -0.08
SAMM50-201ENST00000350028 PCNX2A6NKB5 2137 aa14.56□□□□□ -0.08
SAMM50-201ENST00000350028 G3V3Q6 166 aa14.56□□□□□ -0.08
SAMM50-201ENST00000350028 TPOP07202 933 aa14.56□□□□□ -0.08
SAMM50-201ENST00000350028 MMP7P09237 267 aaPredicted RBP14.56□□□□□ -0.08
SAMM50-201ENST00000350028 PRKACBP22694 351 aa14.56□□□□□ -0.08
SAMM50-201ENST00000350028 TMEM50BP56557 158 aa14.56□□□□□ -0.08
SAMM50-201ENST00000350028 CXADRP78310 365 aa14.56□□□□□ -0.08
SAMM50-201ENST00000350028 HGFACQ04756 655 aa14.56□□□□□ -0.08
SAMM50-201ENST00000350028 SLC10A1Q14973 349 aa14.56□□□□□ -0.08
SAMM50-201ENST00000350028 ARL6IP1Q15041 203 aa14.56□□□□□ -0.08
SAMM50-201ENST00000350028 MPPED2Q15777 294 aa14.56□□□□□ -0.08
SAMM50-201ENST00000350028 SCGB2B2Q4G0G5 96 aa14.56□□□□□ -0.08
SAMM50-201ENST00000350028 PLAC9Q5JTB6 97 aa14.56□□□□□ -0.08
SAMM50-201ENST00000350028 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.56□□□□□ -0.08
SAMM50-201ENST00000350028 MUC20Q8N307 709 aaPredicted RBP14.56□□□□□ -0.08
SAMM50-201ENST00000350028 GVQW1Q8N7I0 195 aa14.56□□□□□ -0.08
SAMM50-201ENST00000350028 ZFP62Q8NB50 900 aaPredicted RBP14.56□□□□□ -0.08
SAMM50-201ENST00000350028 DEFB124Q8NES8 71 aa14.56□□□□□ -0.08
SAMM50-201ENST00000350028 OR51T1Q8NGJ9 327 aa14.56□□□□□ -0.08
SAMM50-201ENST00000350028 OR13C8Q8NGS7 320 aa14.56□□□□□ -0.08
SAMM50-201ENST00000350028 FGFBP3Q8TAT2 258 aa14.56□□□□□ -0.08
SAMM50-201ENST00000350028 TM2D1Q9BX74 207 aa14.56□□□□□ -0.08
SAMM50-201ENST00000350028 BCO1Q9HAY6 547 aa14.56□□□□□ -0.08
SAMM50-201ENST00000350028 SLC7A10Q9NS82 523 aa14.56□□□□□ -0.08
SAMM50-201ENST00000350028 EIF3KQ9UBQ5 218 aaKnown RBP14.56□□□□□ -0.08
SAMM50-201ENST00000350028 A0A1W2PP11 408 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 ARGFXA6NJG6 315 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 CDRT15L2A8MXV6 281 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 MFNGO00587 321 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 OR4E1P0C645 316 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 FTH1P19P0C7X4 201 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 ARF1P84077 181 aaKnown RBP14.55□□□□□ -0.08
SAMM50-201ENST00000350028 RNPS1Q15287 305 aaKnown RBP14.55□□□□□ -0.08
SAMM50-201ENST00000350028 CNN3Q15417 329 aaKnown RBP14.55□□□□□ -0.08
SAMM50-201ENST00000350028 LGALSLQ3ZCW2 172 aaPredicted RBP14.55□□□□□ -0.08
SAMM50-201ENST00000350028 ACTBL2Q562R1 376 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 ATPAF1Q5TC12 328 aaPredicted RBP14.55□□□□□ -0.08
SAMM50-201ENST00000350028 C1QL2Q7Z5L3 287 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 TUSC5Q8IXB3 177 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 ZNF100Q8IYN0 542 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 ZDHHC22Q8N966 263 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 OR2AE1Q8NHA4 323 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 ASB13Q8WXK3 278 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 PIGTQ969N2 578 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 GPR173Q9NS66 373 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 FAM186AA6NE01 2351 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 ZNF587BE7ETH6 402 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 H3BUI4 141 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 MGMTP16455 207 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 ACKR3P25106 362 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 DHODHQ02127 395 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 NKPD1Q17RQ9 610 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 CD163Q86VB7 1156 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 OR5D18Q8NGL1 313 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 OCSTAMPQ9BR26 566 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 CALHM2Q9HA72 323 aa14.55□□□□□ -0.08
SAMM50-201ENST00000350028 KNTC1P50748 2209 aa14.54□□□□□ -0.08
SAMM50-201ENST00000350028 A6NL46 340 aa14.54□□□□□ -0.08
SAMM50-201ENST00000350028 FOXI3A8MTJ6 420 aaPredicted RBP14.54□□□□□ -0.08
SAMM50-201ENST00000350028 XRCC2O43543 280 aa14.54□□□□□ -0.08
SAMM50-201ENST00000350028 IFNA6P05013 189 aa14.54□□□□□ -0.08
SAMM50-201ENST00000350028 CSN2P05814 226 aa14.54□□□□□ -0.08
SAMM50-201ENST00000350028 TSPAN5P62079 268 aa14.54□□□□□ -0.08
SAMM50-201ENST00000350028 NHLH1Q02575 133 aa14.54□□□□□ -0.08
SAMM50-201ENST00000350028 RSPO4Q2I0M5 234 aaPredicted RBP14.54□□□□□ -0.08
SAMM50-201ENST00000350028 PABPC1L2AQ5JQF8 200 aa14.54□□□□□ -0.08
SAMM50-201ENST00000350028 CLVS2Q5SYC1 327 aa14.54□□□□□ -0.08
SAMM50-201ENST00000350028 ATP1A1-AS1Q5TC04 95 aa14.54□□□□□ -0.08
SAMM50-201ENST00000350028 OR52W1Q6IF63 320 aa14.54□□□□□ -0.08
SAMM50-201ENST00000350028 TMED4Q7Z7H5 227 aa14.54□□□□□ -0.08
SAMM50-201ENST00000350028 C12orf45Q8N5I9 185 aaPredicted RBP14.54□□□□□ -0.08
SAMM50-201ENST00000350028 OR4K15Q8NH41 348 aa14.54□□□□□ -0.08
SAMM50-201ENST00000350028 FNDC9Q8TBE3 224 aa14.54□□□□□ -0.08
SAMM50-201ENST00000350028 ARHGAP5-AS1Q96IT6 56 aa14.54□□□□□ -0.08
SAMM50-201ENST00000350028 TMPRSS13Q9BYE2 586 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms