RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 MCEMP1Q8IX19 187 aa16.24■□□□□ 0.19
HOXA9-201ENST00000343483 OR2AE1Q8NHA4 323 aa16.24■□□□□ 0.19
HOXA9-201ENST00000343483 RADILQ96JH8 1075 aa16.24■□□□□ 0.19
HOXA9-201ENST00000343483 WNT5BQ9H1J7 359 aa16.24■□□□□ 0.19
HOXA9-201ENST00000343483 TRGV5A0A0B4J1U4 118 aa16.23■□□□□ 0.19
HOXA9-201ENST00000343483 M0QYG6 137 aa16.23■□□□□ 0.19
HOXA9-201ENST00000343483 CYB5AP00167 134 aa16.23■□□□□ 0.19
HOXA9-201ENST00000343483 LCATP04180 440 aa16.23■□□□□ 0.19
HOXA9-201ENST00000343483 THBS4P35443 961 aa16.23■□□□□ 0.19
HOXA9-201ENST00000343483 RAP2BP61225 183 aa16.23■□□□□ 0.19
HOXA9-201ENST00000343483 RAB12Q6IQ22 244 aa16.23■□□□□ 0.19
HOXA9-201ENST00000343483 IGF2-ASQ6U949 168 aa16.23■□□□□ 0.19
HOXA9-201ENST00000343483 ZNF680Q8NEM1 530 aa16.23■□□□□ 0.19
HOXA9-201ENST00000343483 SGK3Q96BR1 496 aa16.23■□□□□ 0.19
HOXA9-201ENST00000343483 CMBLQ96DG6 245 aa16.23■□□□□ 0.19
HOXA9-201ENST00000343483 LINC00470Q9BZP3 86 aa16.23■□□□□ 0.19
HOXA9-201ENST00000343483 TPRP12270 2363 aaKnown RBP16.23■□□□□ 0.19
HOXA9-201ENST00000343483 ZNF587BE7ETH6 402 aa16.23■□□□□ 0.19
HOXA9-201ENST00000343483 ARF1P84077 181 aaKnown RBP16.23■□□□□ 0.19
HOXA9-201ENST00000343483 RNPS1Q15287 305 aaKnown RBP16.23■□□□□ 0.19
HOXA9-201ENST00000343483 APH1AQ96BI3 265 aa16.23■□□□□ 0.19
HOXA9-201ENST00000343483 DPCDQ9BVM2 203 aaPredicted RBP16.23■□□□□ 0.19
HOXA9-201ENST00000343483 TINAGL1Q9GZM7 467 aaPredicted RBP16.23■□□□□ 0.19
HOXA9-201ENST00000343483 CLEC4MQ9H2X3 399 aaPredicted RBP16.23■□□□□ 0.19
HOXA9-201ENST00000343483 BCO1Q9HAY6 547 aa16.23■□□□□ 0.19
HOXA9-201ENST00000343483 SPRR3Q9UBC9 169 aa16.23■□□□□ 0.19
HOXA9-201ENST00000343483 UPB1Q9UBR1 384 aa16.23■□□□□ 0.19
HOXA9-201ENST00000343483 IGF2RP11717 2491 aa16.23■□□□□ 0.19
HOXA9-201ENST00000343483 LOC400499M0QZD8 3231 aa16.22■□□□□ 0.19
HOXA9-201ENST00000343483 A0A096LPE4 126 aa16.22■□□□□ 0.19
HOXA9-201ENST00000343483 A0A1W2PPZ6 126 aa16.22■□□□□ 0.19
HOXA9-201ENST00000343483 ZNF724A8MTY0 619 aa16.22■□□□□ 0.19
HOXA9-201ENST00000343483 ZNF736B4DX44 427 aaPredicted RBP16.22■□□□□ 0.19
HOXA9-201ENST00000343483 OR2A4O95047 310 aa16.22■□□□□ 0.19
HOXA9-201ENST00000343483 AMY2AP04746 511 aa16.22■□□□□ 0.19
HOXA9-201ENST00000343483 IDO2Q6ZQW0 420 aa16.22■□□□□ 0.19
HOXA9-201ENST00000343483 CDH26Q8IXH8 852 aa16.22■□□□□ 0.19
HOXA9-201ENST00000343483 MUC20Q8N307 709 aaPredicted RBP16.22■□□□□ 0.19
HOXA9-201ENST00000343483 UXS1Q8NBZ7 420 aa16.22■□□□□ 0.19
HOXA9-201ENST00000343483 CHST4Q8NCG5 386 aa16.22■□□□□ 0.19
HOXA9-201ENST00000343483 PP6455Q8WZ26 134 aa16.22■□□□□ 0.19
HOXA9-201ENST00000343483 AQP3Q92482 292 aa16.22■□□□□ 0.19
HOXA9-201ENST00000343483 REEP6Q96HR9 211 aa16.22■□□□□ 0.19
HOXA9-201ENST00000343483 OR2A7Q96R45 310 aa16.22■□□□□ 0.19
HOXA9-201ENST00000343483 RAB27BO00194 218 aa16.22■□□□□ 0.19
HOXA9-201ENST00000343483 UBE2V2Q15819 145 aa16.22■□□□□ 0.19
HOXA9-201ENST00000343483 C4orf46Q504U0 113 aa16.22■□□□□ 0.19
HOXA9-201ENST00000343483 ZNF584Q8IVC4 421 aa16.22■□□□□ 0.19
HOXA9-201ENST00000343483 OR5D18Q8NGL1 313 aa16.22■□□□□ 0.19
HOXA9-201ENST00000343483 CITED4Q96RK1 184 aa16.22■□□□□ 0.19
HOXA9-201ENST00000343483 CHST5Q9GZS9 411 aa16.22■□□□□ 0.19
HOXA9-201ENST00000343483 CHST6Q9GZX3 395 aa16.22■□□□□ 0.19
HOXA9-201ENST00000343483 POFUT1Q9H488 388 aa16.22■□□□□ 0.19
HOXA9-201ENST00000343483 ZDHHC11Q9H8X9 412 aa16.22■□□□□ 0.19
HOXA9-201ENST00000343483 B3GNT2Q9NY97 397 aa16.22■□□□□ 0.19
HOXA9-201ENST00000343483 ZNF107Q9UII5 783 aaPredicted RBP16.22■□□□□ 0.19
HOXA9-201ENST00000343483 WIPF3A6NGB9 483 aa16.21■□□□□ 0.19
HOXA9-201ENST00000343483 TMEM14DPA8MWL7 114 aa16.21■□□□□ 0.19
HOXA9-201ENST00000343483 SLC22A5O76082 557 aa16.21■□□□□ 0.19
HOXA9-201ENST00000343483 PRSS12P56730 875 aa16.21■□□□□ 0.19
HOXA9-201ENST00000343483 UBE2MP61081 183 aaKnown RBP16.21■□□□□ 0.19
HOXA9-201ENST00000343483 KISS1Q15726 138 aa16.21■□□□□ 0.19
HOXA9-201ENST00000343483 ZNF260Q3ZCT1 412 aa16.21■□□□□ 0.19
HOXA9-201ENST00000343483 NRN1LQ496H8 165 aa16.21■□□□□ 0.19
HOXA9-201ENST00000343483 PABPC1L2AQ5JQF8 200 aa16.21■□□□□ 0.19
HOXA9-201ENST00000343483 FJX1Q86VR8 437 aa16.21■□□□□ 0.19
HOXA9-201ENST00000343483 PNLDC1Q8NA58 520 aaKnown RBP16.21■□□□□ 0.19
HOXA9-201ENST00000343483 TMEM104Q8NE00 496 aa16.21■□□□□ 0.19
HOXA9-201ENST00000343483 SEMA6DQ8NFY4 1073 aa16.21■□□□□ 0.19
HOXA9-201ENST00000343483 WDR89Q96FK6 387 aaPredicted RBP16.21■□□□□ 0.19
HOXA9-201ENST00000343483 WDYHV1Q96HA8 205 aa16.21■□□□□ 0.19
HOXA9-201ENST00000343483 ZNF407Q9C0G0 2248 aa16.21■□□□□ 0.19
HOXA9-201ENST00000343483 OR6C65A6NJZ3 312 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 NOS1APO75052 506 aaPredicted RBP16.2■□□□□ 0.18
HOXA9-201ENST00000343483 MPC2O95563 127 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 MPIG6BO95866 241 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 CD74P04233 296 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 MELTFP08582 738 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 MMP7P09237 267 aaPredicted RBP16.2■□□□□ 0.18
HOXA9-201ENST00000343483 FOXG1P55316 489 aaPredicted RBP16.2■□□□□ 0.18
HOXA9-201ENST00000343483 CAMK2BQ13554 666 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 DEFB109BQ30KR1 87 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 KRTAP27-1Q3LI81 207 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 ZNF100Q8IYN0 542 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 OR8H3Q8N146 312 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 OR2AK2Q8NG84 335 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 TNFAIP8L1Q8WVP5 186 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 SLC25A21Q9BQT8 299 aaPredicted RBP16.2■□□□□ 0.18
HOXA9-201ENST00000343483 RNF122Q9H9V4 155 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 ZNF224Q9NZL3 707 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 FBLN5Q9UBX5 448 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 TMEM82A0PJX8 343 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 GOSR2O14653 212 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 SIX6O95475 246 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 ACKR3P25106 362 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 DHODHQ02127 395 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 C2orf68Q2NKX9 166 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 CDNFQ49AH0 187 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 Q6ZSR3 168 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 NUFIP2Q7Z417 695 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms