RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 C1QTNF6Q9BXI9 259 aa15.92■□□□□ 0.14
USP39-201ENST00000323701 CACNG2Q9Y698 323 aa15.92■□□□□ 0.14
USP39-201ENST00000323701 DHRS7CA6NNS2 312 aa15.92■□□□□ 0.14
USP39-201ENST00000323701 TMEM14DPA8MWL7 114 aa15.92■□□□□ 0.14
USP39-201ENST00000323701 ZNF14P17017 642 aaPredicted RBP15.92■□□□□ 0.14
USP39-201ENST00000323701 COX5AP20674 150 aa15.92■□□□□ 0.14
USP39-201ENST00000323701 RSBN1Q5VWQ0 802 aaPredicted RBP15.92■□□□□ 0.14
USP39-201ENST00000323701 ENKURQ8TC29 256 aa15.92■□□□□ 0.14
USP39-201ENST00000323701 UPRTQ96BW1 309 aa15.92■□□□□ 0.14
USP39-201ENST00000323701 C10orf35Q96D05 121 aa15.92■□□□□ 0.14
USP39-201ENST00000323701 RGCCQ9H4X1 137 aa15.92■□□□□ 0.14
USP39-201ENST00000323701 BANF2Q9H503 90 aa15.92■□□□□ 0.14
USP39-201ENST00000323701 DIABLOQ9NR28 239 aa15.92■□□□□ 0.14
USP39-201ENST00000323701 A0A0A6YYD4 124 aa15.91■□□□□ 0.14
USP39-201ENST00000323701 C1QTNF9BB2RNN3 333 aa15.91■□□□□ 0.14
USP39-201ENST00000323701 RAB27BO00194 218 aa15.91■□□□□ 0.14
USP39-201ENST00000323701 MT-ND4P03905 459 aa15.91■□□□□ 0.14
USP39-201ENST00000323701 SERPINA5P05154 406 aa15.91■□□□□ 0.14
USP39-201ENST00000323701 C1QTNF9P0C862 333 aa15.91■□□□□ 0.14
USP39-201ENST00000323701 SLC6A1P30531 599 aa15.91■□□□□ 0.14
USP39-201ENST00000323701 RCVRNP35243 200 aa15.91■□□□□ 0.14
USP39-201ENST00000323701 IFITM2Q01629 132 aa15.91■□□□□ 0.14
USP39-201ENST00000323701 PLP2Q04941 152 aa15.91■□□□□ 0.14
USP39-201ENST00000323701 RFPL4BQ6ZWI9 263 aa15.91■□□□□ 0.14
USP39-201ENST00000323701 UBASH3BQ8TF42 649 aa15.91■□□□□ 0.14
USP39-201ENST00000323701 FCAMRQ8WWV6 532 aa15.91■□□□□ 0.14
USP39-201ENST00000323701 REPIN1Q9BWE0 567 aaKnown RBP15.91■□□□□ 0.14
USP39-201ENST00000323701 NPAP1Q9NZP6 1156 aa15.91■□□□□ 0.14
USP39-201ENST00000323701 ZNF629Q9UEG4 869 aaPredicted RBP15.91■□□□□ 0.14
USP39-201ENST00000323701 XRCC2O43543 280 aa15.9■□□□□ 0.14
USP39-201ENST00000323701 ALX3O95076 343 aa15.9■□□□□ 0.14
USP39-201ENST00000323701 AGFG2O95081 481 aa15.9■□□□□ 0.14
USP39-201ENST00000323701 PTGFRP43088 359 aa15.9■□□□□ 0.14
USP39-201ENST00000323701 KRTCAP3Q53RY4 240 aa15.9■□□□□ 0.14
USP39-201ENST00000323701 ATAD3CQ5T2N8 411 aa15.9■□□□□ 0.14
USP39-201ENST00000323701 FAAP20Q6NZ36 180 aa15.9■□□□□ 0.14
USP39-201ENST00000323701 CXorf67Q86X51 503 aaPredicted RBP15.9■□□□□ 0.14
USP39-201ENST00000323701 WDR31Q8NA23 367 aa15.9■□□□□ 0.14
USP39-201ENST00000323701 DUSP18Q8NEJ0 188 aa15.9■□□□□ 0.14
USP39-201ENST00000323701 SLC30A7Q8NEW0 376 aa15.9■□□□□ 0.14
USP39-201ENST00000323701 OR10K1Q8NGX5 313 aa15.9■□□□□ 0.14
USP39-201ENST00000323701 PTX4Q96A99 478 aa15.9■□□□□ 0.14
USP39-201ENST00000323701 ZC3HAV1LQ96H79 300 aaKnown RBP15.9■□□□□ 0.14
USP39-201ENST00000323701 PTTG3PQ9NZH4 202 aa15.9■□□□□ 0.14
USP39-201ENST00000323701 RAB22AQ9UL26 194 aa15.9■□□□□ 0.14
USP39-201ENST00000323701 FAM240BA0A1B0GVZ2 78 aa15.9■□□□□ 0.14
USP39-201ENST00000323701 A8MV72 311 aaPredicted RBP15.9■□□□□ 0.14
USP39-201ENST00000323701 IDH3GP51553 393 aaPredicted RBP15.9■□□□□ 0.14
USP39-201ENST00000323701 TGFBR3Q03167 851 aa15.9■□□□□ 0.14
USP39-201ENST00000323701 SF3B4Q15427 424 aaKnown RBP eCLIP15.9■□□□□ 0.143e-14■■■■■ 33.9
USP39-201ENST00000323701 SLC22A6Q4U2R8 563 aa15.9■□□□□ 0.14
USP39-201ENST00000323701 PLA1AQ53H76 456 aa15.9■□□□□ 0.14
USP39-201ENST00000323701 C1orf185Q5T7R7 199 aa15.9■□□□□ 0.14
USP39-201ENST00000323701 MZT2BQ6NZ67 158 aa15.9■□□□□ 0.14
USP39-201ENST00000323701 OR56B2PQ8NGI1 322 aa15.9■□□□□ 0.14
USP39-201ENST00000323701 FAM57AQ8TBR7 257 aa15.9■□□□□ 0.14
USP39-201ENST00000323701 AKAP1Q92667 903 aaKnown RBP eCLIP15.9■□□□□ 0.14
USP39-201ENST00000323701 APOBEC3DQ96AK3 386 aaPredicted RBP15.9■□□□□ 0.14
USP39-201ENST00000323701 SNRNP40Q96DI7 357 aaKnown RBP15.9■□□□□ 0.14
USP39-201ENST00000323701 NEK6Q9HC98 313 aa15.9■□□□□ 0.14
USP39-201ENST00000323701 ZNF391Q9UJN7 358 aa15.9■□□□□ 0.14
USP39-201ENST00000323701 FAM230AA0A1W2PPH8 454 aa15.89■□□□□ 0.13
USP39-201ENST00000323701 LILRA1O75019 489 aa15.89■□□□□ 0.13
USP39-201ENST00000323701 WDR1O75083 606 aa15.89■□□□□ 0.13
USP39-201ENST00000323701 NRASP01111 189 aa15.89■□□□□ 0.13
USP39-201ENST00000323701 NAT2P11245 290 aa15.89■□□□□ 0.13
USP39-201ENST00000323701 RAB6AP20340 208 aa15.89■□□□□ 0.13
USP39-201ENST00000323701 APLNRP35414 380 aa15.89■□□□□ 0.13
USP39-201ENST00000323701 CCR6P51684 374 aa15.89■□□□□ 0.13
USP39-201ENST00000323701 CDH26Q8IXH8 852 aa15.89■□□□□ 0.13
USP39-201ENST00000323701 CCDC54Q8NEL0 328 aa15.89■□□□□ 0.13
USP39-201ENST00000323701 ZNF486Q96H40 463 aaPredicted RBP15.89■□□□□ 0.13
USP39-201ENST00000323701 LPAR5Q9H1C0 372 aa15.89■□□□□ 0.13
USP39-201ENST00000323701 MOV10Q9HCE1 1003 aaKnown RBP15.89■□□□□ 0.13
USP39-201ENST00000323701 SMG1Q96Q15 3661 aaKnown RBP15.89■□□□□ 0.13
USP39-201ENST00000323701 TMEM235A6NFC5 223 aa15.89■□□□□ 0.13
USP39-201ENST00000323701 CNOT4O95628 575 aaKnown RBP15.89■□□□□ 0.13
USP39-201ENST00000323701 MPIG6BO95866 241 aa15.89■□□□□ 0.13
USP39-201ENST00000323701 VEGFCP49767 419 aa15.89■□□□□ 0.13
USP39-201ENST00000323701 CLVS2Q5SYC1 327 aa15.89■□□□□ 0.13
USP39-201ENST00000323701 SPATA46Q5T0L3 261 aa15.89■□□□□ 0.13
USP39-201ENST00000323701 TNFAIP8L1Q8WVP5 186 aa15.89■□□□□ 0.13
USP39-201ENST00000323701 PIGCQ92535 297 aa15.89■□□□□ 0.13
USP39-201ENST00000323701 PHF21AQ96BD5 680 aa15.89■□□□□ 0.13
USP39-201ENST00000323701 ST6GAL2Q96JF0 529 aa15.89■□□□□ 0.13
USP39-201ENST00000323701 FGF23Q9GZV9 251 aaPredicted RBP15.89■□□□□ 0.13
USP39-201ENST00000323701 ASF1BQ9NVP2 202 aa15.89■□□□□ 0.13
USP39-201ENST00000323701 RABL2AQ9UBK7 228 aaPredicted RBP15.89■□□□□ 0.13
USP39-201ENST00000323701 FBLN5Q9UBX5 448 aa15.89■□□□□ 0.13
USP39-201ENST00000323701 GPR160Q9UJ42 338 aa15.89■□□□□ 0.13
USP39-201ENST00000323701 PROCRQ9UNN8 238 aa15.89■□□□□ 0.13
USP39-201ENST00000323701 RABL2BQ9UNT1 228 aa15.89■□□□□ 0.13
USP39-201ENST00000323701 PCNX1Q96RV3 2341 aa15.88■□□□□ 0.13
USP39-201ENST00000323701 FIGNL2A6NMB9 653 aa15.88■□□□□ 0.13
USP39-201ENST00000323701 CDC14BO60729 498 aa15.88■□□□□ 0.13
USP39-201ENST00000323701 PLATP00750 562 aa15.88■□□□□ 0.13
USP39-201ENST00000323701 MTCP1P56278 107 aa15.88■□□□□ 0.13
USP39-201ENST00000323701 RAB25P57735 213 aa15.88■□□□□ 0.13
USP39-201ENST00000323701 ZP1P60852 638 aa15.88■□□□□ 0.13
USP39-201ENST00000323701 HACD4Q5VWC8 232 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms