RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 TMEM50BP56557 158 aa11.95□□□□□ -0.5
RPUSD4-201ENST00000298317 CD81P60033 236 aa11.95□□□□□ -0.5
RPUSD4-201ENST00000298317 RAC1P63000 192 aa11.95□□□□□ -0.5
RPUSD4-201ENST00000298317 NHLH2Q02577 135 aa11.95□□□□□ -0.5
RPUSD4-201ENST00000298317 GAMTQ14353 236 aa11.95□□□□□ -0.5
RPUSD4-201ENST00000298317 SURF2Q15527 256 aaPredicted RBP11.95□□□□□ -0.5
RPUSD4-201ENST00000298317 AARDQ4LEZ3 155 aa11.95□□□□□ -0.5
RPUSD4-201ENST00000298317 THEM4Q5T1C6 240 aa11.95□□□□□ -0.5
RPUSD4-201ENST00000298317 DEGS2Q6QHC5 323 aa11.95□□□□□ -0.5
RPUSD4-201ENST00000298317 CLEC9AQ6UXN8 241 aa11.95□□□□□ -0.5
RPUSD4-201ENST00000298317 SPNS3Q6ZMD2 512 aa11.95□□□□□ -0.5
RPUSD4-201ENST00000298317 TTLL10Q6ZVT0 673 aa11.95□□□□□ -0.5
RPUSD4-201ENST00000298317 ZNF101Q8IZC7 436 aa11.95□□□□□ -0.5
RPUSD4-201ENST00000298317 ARHGEF39Q8N4T4 335 aa11.95□□□□□ -0.5
RPUSD4-201ENST00000298317 TMEM104Q8NE00 496 aa11.95□□□□□ -0.5
RPUSD4-201ENST00000298317 OR1E3Q8WZA6 343 aa11.95□□□□□ -0.5
RPUSD4-201ENST00000298317 NTNG2Q96CW9 530 aa11.95□□□□□ -0.5
RPUSD4-201ENST00000298317 CDCA3Q99618 268 aaPredicted RBP11.95□□□□□ -0.5
RPUSD4-201ENST00000298317 OPN3Q9H1Y3 402 aaPredicted RBP11.95□□□□□ -0.5
RPUSD4-201ENST00000298317 RIMS4Q9H426 269 aaPredicted RBP11.95□□□□□ -0.5
RPUSD4-201ENST00000298317 MMP24Q9Y5R2 645 aa11.95□□□□□ -0.5
RPUSD4-201ENST00000298317 ADH1BP00325 375 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 MT-ATP6P00846 226 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 TTRP02766 147 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 AMY2BP19961 511 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 ZNF93P35789 620 aaPredicted RBP11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 P2RY1P47900 373 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 LSM6P62312 80 aaKnown RBP11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 USF2Q15853 346 aaPredicted RBP11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 C14orf28Q4W4Y0 310 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 LFNGQ8NES3 379 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 SLC26A10Q8NG04 563 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 FNDC9Q8TBE3 224 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 BSCL2Q96G97 398 aaPredicted RBP11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 SMDT1Q9H4I9 107 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 UNKLQ9H9P5 680 aaKnown RBP11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 FAM206AQ9NX38 181 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 MRPS23Q9Y3D9 190 aaKnown RBP11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 PUS1Q9Y606 427 aaKnown RBP eCLIP11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 CDC14BO60729 498 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 HIST1H2BKO60814 126 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 RAMP1O60894 148 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 FKTNO75072 461 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 MPIG6BO95866 241 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 HIST1H2BJP06899 126 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 FREM3P0C091 2139 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 HIST1H2BOP23527 126 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 HIST1H2BBP33778 126 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 WASP42768 502 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 HIST1H2BDP58876 126 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 HIST1H2BCP62807 126 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 TNFRSF9Q07011 255 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 TDGQ13569 410 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 HIST2H2BEQ16778 126 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 SOHLH1Q5JUK2 328 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 GLIPR1L1Q6UWM5 242 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 RTL10Q7L3V2 364 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 RNF144BQ7Z419 303 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 LINC00346Q8IVM7 164 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 HIST3H2BBQ8N257 126 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 TMEM156Q8N614 296 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 DTD1Q8TEA8 209 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 HPSE2Q8WWQ2 592 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 HIST1H2BHQ93079 126 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 SLC25A36Q96CQ1 311 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 HIST1H2BNQ99877 126 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 HIST1H2BMQ99879 126 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 SUCNR1Q9BXA5 334 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 WFDC1Q9HC57 220 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 MMACHCQ9Y4U1 282 aa11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 LSM5Q9Y4Y9 91 aaKnown RBP11.94□□□□□ -0.5
RPUSD4-201ENST00000298317 BORCS7-ASMTA0A0B4J1R7 106 aa11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 C1QL1O75973 258 aa11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 DXOO77932 396 aaKnown RBP11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 UTS2O95399 124 aa11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 IL33O95760 270 aa11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 CTSBP07858 339 aa11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 RBMXP38159 391 aaKnown RBP11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 GNG10P50151 68 aa11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 ELOBQ15370 118 aa11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 RSU1Q15404 277 aa11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 FAM78AQ5JUQ0 283 aa11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 POMZP3Q6PJE2 187 aa11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 SVIPQ8NHG7 77 aa11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 Q8WTZ3 238 aa11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 TGM7Q96PF1 710 aa11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 CCDC3Q9BQI4 270 aa11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 GPR61Q9BZJ8 451 aa11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 FOXQ1Q9C009 403 aa11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 OR11A1Q9GZK7 315 aa11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 PRO1933Q9H354 126 aa11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 ZDHHC8Q9ULC8 765 aa11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 A0A087WWC5 75 aa11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 ELOA3CA0A087WX78 387 aaPredicted RBP11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 A0A0J9YY10 115 aa11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 ZNF587BE7ETH6 402 aa11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 SDCBPO00560 298 aaPredicted RBP11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 SOX1O00570 391 aaPredicted RBP11.93□□□□□ -0.5
RPUSD4-201ENST00000298317 TOX3O15405 576 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms