RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 SLC38A6Q8IZM9 456 aa15.48■□□□□ 0.07
SHANK1-201ENST00000293441 FBXW5Q969U6 566 aa15.48■□□□□ 0.07
SHANK1-201ENST00000293441 CHEK1O14757 476 aa15.48■□□□□ 0.07
SHANK1-201ENST00000293441 OR8B4Q96RC9 309 aa15.48■□□□□ 0.07
SHANK1-201ENST00000293441 FAM60AQ9NP50 221 aa15.48■□□□□ 0.07
SHANK1-201ENST00000293441 FGF7P21781 194 aa15.48■□□□□ 0.07
SHANK1-201ENST00000293441 RPL7L1Q6DKI1 246 aaKnown RBP15.48■□□□□ 0.07
SHANK1-201ENST00000293441 SKA3Q8IX90 412 aa15.48■□□□□ 0.07
SHANK1-201ENST00000293441 PP6455Q8WZ26 134 aa15.48■□□□□ 0.07
SHANK1-201ENST00000293441 CIB3Q96Q77 187 aaPredicted RBP15.48■□□□□ 0.07
SHANK1-201ENST00000293441 M0R1X1 148 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 JTBO76095 146 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 RPL12P30050 165 aaKnown RBP15.47■□□□□ 0.07
SHANK1-201ENST00000293441 SH2D5Q6ZV89 423 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 GLCCI1Q86VQ1 547 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 DOK1Q99704 481 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 TAAR3PQ9P1P4 343 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 TAAR5O14804 337 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 PSMB6P28072 239 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 DCTDP32321 178 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 NKG7Q16617 165 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 POM121L2Q96KW2 1035 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 C20orf141Q9NUB4 165 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 E5RGE8 158 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 ZNF32P17041 273 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 OR5I1Q13606 314 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 PABPC1L2AQ5JQF8 200 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 PHYHD1Q5SRE7 291 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 GNPNAT1Q96EK6 184 aaPredicted RBP15.47■□□□□ 0.07
SHANK1-201ENST00000293441 RHNO1Q9BSD3 238 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 NSG2Q9Y328 171 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 OR2F2O95006 317 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 MLF1P58340 268 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 TNFAIP6P98066 277 aaPredicted RBP15.47■□□□□ 0.07
SHANK1-201ENST00000293441 CDH26Q8IXH8 852 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 FBXO34Q9NWN3 711 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 ZBTB25P24278 435 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 ASAH1Q13510 395 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 EXOSC2Q13868 293 aaKnown RBP15.47■□□□□ 0.07
SHANK1-201ENST00000293441 C3AR1Q16581 482 aa15.47■□□□□ 0.07
SHANK1-201ENST00000293441 JMJD6Q6NYC1 403 aaPredicted RBP15.47■□□□□ 0.07
SHANK1-201ENST00000293441 DUS3LQ96G46 650 aaKnown RBP15.47■□□□□ 0.07
SHANK1-201ENST00000293441 ZNF785A8K8V0 405 aa15.46■□□□□ 0.07
SHANK1-201ENST00000293441 C20orf196Q8IYI0 205 aa15.46■□□□□ 0.07
SHANK1-201ENST00000293441 ZNF683Q8IZ20 524 aa15.46■□□□□ 0.07
SHANK1-201ENST00000293441 RBPMSQ93062 196 aaKnown RBP15.46■□□□□ 0.07
SHANK1-201ENST00000293441 LAMP3Q9UQV4 416 aa15.46■□□□□ 0.07
SHANK1-201ENST00000293441 MCM3APO60318 1980 aa15.46■□□□□ 0.07
SHANK1-201ENST00000293441 KCNE1BA0A087WTH5 132 aa15.46■□□□□ 0.07
SHANK1-201ENST00000293441 ST8SIA5O15466 376 aa15.46■□□□□ 0.07
SHANK1-201ENST00000293441 CT62P0C5K7 136 aa15.46■□□□□ 0.07
SHANK1-201ENST00000293441 EPXP11678 715 aa15.46■□□□□ 0.07
SHANK1-201ENST00000293441 CD1EP15812 388 aa15.46■□□□□ 0.07
SHANK1-201ENST00000293441 MAMSTRQ6ZN01 415 aa15.46■□□□□ 0.07
SHANK1-201ENST00000293441 ZNF547Q8IVP9 402 aa15.46■□□□□ 0.07
SHANK1-201ENST00000293441 OR2T6Q8NHC8 308 aa15.46■□□□□ 0.07
SHANK1-201ENST00000293441 COX14Q96I36 57 aa15.46■□□□□ 0.07
SHANK1-201ENST00000293441 MRPL22Q9NWU5 206 aaKnown RBP15.46■□□□□ 0.07
SHANK1-201ENST00000293441 RCL1Q9Y2P8 373 aaKnown RBP15.46■□□□□ 0.07
SHANK1-201ENST00000293441 CLEC18AA5D8T8 446 aa15.46■□□□□ 0.07
SHANK1-201ENST00000293441 CCL4P13236 92 aa15.46■□□□□ 0.07
SHANK1-201ENST00000293441 PCBP4P57723 403 aaKnown RBP15.46■□□□□ 0.07
SHANK1-201ENST00000293441 CLEC18CQ8NCF0 446 aa15.46■□□□□ 0.07
SHANK1-201ENST00000293441 OR4S1Q8NGB4 309 aa15.46■□□□□ 0.07
SHANK1-201ENST00000293441 RTN4IP1Q8WWV3 396 aaPredicted RBP15.46■□□□□ 0.07
SHANK1-201ENST00000293441 TM4SF19Q96DZ7 209 aa15.46■□□□□ 0.07
SHANK1-201ENST00000293441 SIGLEC7Q9Y286 467 aa15.46■□□□□ 0.07
SHANK1-201ENST00000293441 SCN1AP35498 2009 aa15.46■□□□□ 0.07
SHANK1-201ENST00000293441 CYTIPO60759 359 aa15.46■□□□□ 0.07
SHANK1-201ENST00000293441 CEACAM6P40199 344 aa15.46■□□□□ 0.07
SHANK1-201ENST00000293441 SIGLEC14Q08ET2 396 aa15.46■□□□□ 0.07
SHANK1-201ENST00000293441 SERTM1A2A2V5 107 aa15.46■□□□□ 0.06
SHANK1-201ENST00000293441 RAB19A4D1S5 217 aa15.46■□□□□ 0.06
SHANK1-201ENST00000293441 RBP4P02753 201 aa15.46■□□□□ 0.06
SHANK1-201ENST00000293441 EVX1P49640 407 aa15.46■□□□□ 0.06
SHANK1-201ENST00000293441 PPP1CBP62140 327 aa15.46■□□□□ 0.06
SHANK1-201ENST00000293441 Q56UQ5 140 aa15.46■□□□□ 0.06
SHANK1-201ENST00000293441 OR52N4Q8NGI2 321 aa15.46■□□□□ 0.06
SHANK1-201ENST00000293441 DDOSTP39656 456 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 VMA21Q3ZAQ7 101 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 LIMS2Q7Z4I7 341 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 OR13G1Q8NGZ3 307 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 RPEQ96AT9 228 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 CMTM3Q96MX0 182 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 ZNF831Q5JPB2 1677 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 HPP00738 406 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 NGFP01138 241 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 KLF3P57682 345 aaPredicted RBP15.45■□□□□ 0.06
SHANK1-201ENST00000293441 OR2F1Q13607 317 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 Q8IYB0 196 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 OR52B4Q8NGK2 314 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 GOSR1O95249 250 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 PDGFAP04085 211 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 TOMM34Q15785 309 aaPredicted RBP15.45■□□□□ 0.06
SHANK1-201ENST00000293441 ACOT7LQ6ZUV0 252 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 ARHGEF39Q8N4T4 335 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 TSPAN32Q96QS1 320 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 SRD5A2P31213 254 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 LYG2Q86SG7 212 aa15.45■□□□□ 0.06
SHANK1-201ENST00000293441 NRTNQ99748 197 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms