RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 IQCF6A8MYZ5 107 aa16.2■□□□□ 0.18
PDLIM3-202ENST00000284770 J3QRK9 145 aa16.2■□□□□ 0.18
PDLIM3-202ENST00000284770 SIAH2O43255 324 aa16.2■□□□□ 0.18
PDLIM3-202ENST00000284770 KITLGP21583 273 aa16.2■□□□□ 0.18
PDLIM3-202ENST00000284770 BDKRB2P30411 391 aa16.2■□□□□ 0.18
PDLIM3-202ENST00000284770 ZNF45Q02386 682 aa16.2■□□□□ 0.18
PDLIM3-202ENST00000284770 ADAM5Q6NVV9 412 aa16.2■□□□□ 0.18
PDLIM3-202ENST00000284770 VHLLQ6RSH7 139 aa16.2■□□□□ 0.18
PDLIM3-202ENST00000284770 DMRTC2Q8IXT2 367 aaPredicted RBP16.2■□□□□ 0.18
PDLIM3-202ENST00000284770 BHLHE23Q8NDY6 225 aa16.2■□□□□ 0.18
PDLIM3-202ENST00000284770 TRMT10AQ8TBZ6 339 aaKnown RBP16.2■□□□□ 0.18
PDLIM3-202ENST00000284770 UBASH3BQ8TF42 649 aa16.2■□□□□ 0.18
PDLIM3-202ENST00000284770 PIGCQ92535 297 aa16.2■□□□□ 0.18
PDLIM3-202ENST00000284770 CEP19Q96LK0 163 aa16.2■□□□□ 0.18
PDLIM3-202ENST00000284770 PLGRKTQ9HBL7 147 aa16.2■□□□□ 0.18
PDLIM3-202ENST00000284770 CA10Q9NS85 328 aa16.2■□□□□ 0.18
PDLIM3-202ENST00000284770 PURGQ9UJV8 347 aaKnown RBP16.2■□□□□ 0.18
PDLIM3-202ENST00000284770 FZR1Q9UM11 496 aa16.2■□□□□ 0.18
PDLIM3-202ENST00000284770 KLF2Q9Y5W3 355 aaPredicted RBP16.2■□□□□ 0.18
PDLIM3-202ENST00000284770 SPTBN1Q01082 2364 aaKnown RBP16.2■□□□□ 0.18
PDLIM3-202ENST00000284770 CADP27708 2225 aa16.19■□□□□ 0.18
PDLIM3-202ENST00000284770 ANKRD30BLA7E2S9 258 aa16.19■□□□□ 0.18
PDLIM3-202ENST00000284770 DEFB108AA8MXU0 73 aa16.19■□□□□ 0.18
PDLIM3-202ENST00000284770 SHISA9B4DS77 424 aa16.19■□□□□ 0.18
PDLIM3-202ENST00000284770 LILRA1O75019 489 aa16.19■□□□□ 0.18
PDLIM3-202ENST00000284770 ERCC1P07992 297 aaPredicted RBP16.19■□□□□ 0.18
PDLIM3-202ENST00000284770 PLA2G2AP14555 144 aa16.19■□□□□ 0.18
PDLIM3-202ENST00000284770 SNRPBP14678 240 aaKnown RBP16.19■□□□□ 0.18
PDLIM3-202ENST00000284770 DCTN2Q13561 401 aaKnown RBP16.19■□□□□ 0.18
PDLIM3-202ENST00000284770 MSMPQ1L6U9 139 aa16.19■□□□□ 0.18
PDLIM3-202ENST00000284770 TMEM255AQ5JRV8 349 aa16.19■□□□□ 0.18
PDLIM3-202ENST00000284770 SPANXN2Q5MJ10 180 aa16.19■□□□□ 0.18
PDLIM3-202ENST00000284770 FAM166AQ6J272 317 aa16.19■□□□□ 0.18
PDLIM3-202ENST00000284770 OR5AS1Q8N127 324 aa16.19■□□□□ 0.18
PDLIM3-202ENST00000284770 NKAIN3Q8N8D7 197 aa16.19■□□□□ 0.18
PDLIM3-202ENST00000284770 OR5H6Q8NGV6 325 aa16.19■□□□□ 0.18
PDLIM3-202ENST00000284770 SYNPRQ8TBG9 265 aa16.19■□□□□ 0.18
PDLIM3-202ENST00000284770 BORCS5Q969J3 196 aa16.19■□□□□ 0.18
PDLIM3-202ENST00000284770 TECTBQ96PL2 329 aa16.19■□□□□ 0.18
PDLIM3-202ENST00000284770 PAPOLGQ9BWT3 736 aaKnown RBP16.19■□□□□ 0.18
PDLIM3-202ENST00000284770 GPR173Q9NS66 373 aa16.19■□□□□ 0.18
PDLIM3-202ENST00000284770 MRPL15Q9P015 296 aaKnown RBP16.19■□□□□ 0.18
PDLIM3-202ENST00000284770 ATP23Q9Y6H3 246 aa16.19■□□□□ 0.18
PDLIM3-202ENST00000284770 V9GYH0 126 aa16.19■□□□□ 0.18
PDLIM3-202ENST00000284770 UBR5O95071 2799 aaPredicted RBP16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 ZNF850A8MQ14 1090 aa16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 OCMP0CE72 109 aaPredicted RBP16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 ALKBH6Q3KRA9 238 aa16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 DMRTC1Q5HYR2 192 aa16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 GLT8D1Q68CQ7 371 aa16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 OR52N4Q8NGI2 321 aa16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 SSC4DQ8WTU2 575 aa16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 FAM222BQ8WU58 562 aa16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 PPP1R3EQ9H7J1 279 aa16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 ZNF442Q9H7R0 627 aa16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 LIN7BQ9HAP6 207 aa16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 POU2F3Q9UKI9 436 aa16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 SPATA2Q9UM82 520 aa16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 RNF115Q9Y4L5 304 aa16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 ANKHD1Q8IWZ3 2542 aaKnown RBP16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 MYO18BQ8IUG5 2567 aa16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 SLC17A2O00624 439 aa16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 MAGEB3O15480 346 aa16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 ALDOBP05062 364 aa16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 LOXP28300 417 aaPredicted RBP16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 CLDN12P56749 244 aa16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 PRDX4Q13162 271 aa16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 CNN3Q15417 329 aaKnown RBP16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 SAMD12Q8N8I0 201 aa16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 LGALS14Q8TCE9 139 aa16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 STEAP1Q9UHE8 339 aa16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 DUSP13Q9UII6 198 aa16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 GPR160Q9UJ42 338 aa16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 MPC1Q9Y5U8 109 aa16.18■□□□□ 0.18
PDLIM3-202ENST00000284770 IGLV3-9A0A075B6K5 115 aa16.17■□□□□ 0.18
PDLIM3-202ENST00000284770 VGLL3A8MV65 326 aa16.17■□□□□ 0.18
PDLIM3-202ENST00000284770 TIMM8AO60220 97 aaPredicted RBP16.17■□□□□ 0.18
PDLIM3-202ENST00000284770 IGHV3-13P01766 116 aa16.17■□□□□ 0.18
PDLIM3-202ENST00000284770 CALCBP10092 127 aa16.17■□□□□ 0.18
PDLIM3-202ENST00000284770 PRF1P14222 555 aa16.17■□□□□ 0.18
PDLIM3-202ENST00000284770 ELK1P19419 428 aa16.17■□□□□ 0.18
PDLIM3-202ENST00000284770 AZGP1P25311 298 aaKnown RBP16.17■□□□□ 0.18
PDLIM3-202ENST00000284770 CD40LGP29965 261 aa16.17■□□□□ 0.18
PDLIM3-202ENST00000284770 EVX1P49640 407 aa16.17■□□□□ 0.18
PDLIM3-202ENST00000284770 PPP5CP53041 499 aa16.17■□□□□ 0.18
PDLIM3-202ENST00000284770 KLF3P57682 345 aaPredicted RBP16.17■□□□□ 0.18
PDLIM3-202ENST00000284770 PLCXD3Q63HM9 321 aa16.17■□□□□ 0.18
PDLIM3-202ENST00000284770 MOB3CQ70IA8 216 aa16.17■□□□□ 0.18
PDLIM3-202ENST00000284770 LRP11Q86VZ4 500 aa16.17■□□□□ 0.18
PDLIM3-202ENST00000284770 CDH26Q8IXH8 852 aa16.17■□□□□ 0.18
PDLIM3-202ENST00000284770 OR8G5Q8NG78 346 aa16.17■□□□□ 0.18
PDLIM3-202ENST00000284770 SPSB1Q96BD6 273 aa16.17■□□□□ 0.18
PDLIM3-202ENST00000284770 FOXRED1Q96CU9 486 aaPredicted RBP16.17■□□□□ 0.18
PDLIM3-202ENST00000284770 PIK3IP1Q96FE7 263 aa16.17■□□□□ 0.18
PDLIM3-202ENST00000284770 DIRAS2Q96HU8 199 aa16.17■□□□□ 0.18
PDLIM3-202ENST00000284770 MRI1Q9BV20 369 aa16.17■□□□□ 0.18
PDLIM3-202ENST00000284770 OR5V1Q9UGF6 321 aa16.17■□□□□ 0.18
PDLIM3-202ENST00000284770 FLNCQ14315 2725 aa16.16■□□□□ 0.18
PDLIM3-202ENST00000284770 J3QKU1 62 aa16.16■□□□□ 0.18
PDLIM3-202ENST00000284770 EIF4EP06730 217 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms